RNA–Protein interactions for RNA: ENST00000288602.10

BRAF-201, Transcript of B-Raf proto-oncogene, serine/threonine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAF, Length 2,480 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAF-201ENST00000288602 ANGPT2O15123 496 aa18.98■□□□□ 0.63
BRAF-201ENST00000288602 RAD51BO15315 384 aa18.98■□□□□ 0.63
BRAF-201ENST00000288602 S100BP04271 92 aaPredicted RBP18.98■□□□□ 0.63
BRAF-201ENST00000288602 PRR35P0CG20 571 aa18.98■□□□□ 0.63
BRAF-201ENST00000288602 IDO1P14902 403 aa18.98■□□□□ 0.63
BRAF-201ENST00000288602 EPHA5P54756 1037 aa18.98■□□□□ 0.63
BRAF-201ENST00000288602 GPR33Q49SQ1 333 aa18.98■□□□□ 0.63
BRAF-201ENST00000288602 ARHGAP15Q53QZ3 475 aa18.98■□□□□ 0.63
BRAF-201ENST00000288602 TMEM154Q6P9G4 183 aa18.98■□□□□ 0.63
BRAF-201ENST00000288602 IL27RAQ6UWB1 636 aa18.98■□□□□ 0.63
BRAF-201ENST00000288602 MACC1Q6ZN28 852 aa18.98■□□□□ 0.63
BRAF-201ENST00000288602 TMEM181Q9P2C4 612 aa18.98■□□□□ 0.63
BRAF-201ENST00000288602 PCBP2Q15366 365 aaKnown RBP eCLIP18.97■□□□□ 0.633e-6■■■■□ 22.2
BRAF-201ENST00000288602 C8orf82Q6P1X6 216 aaPredicted RBP18.97■□□□□ 0.63
BRAF-201ENST00000288602 FNDC5Q8NAU1 212 aa18.97■□□□□ 0.63
BRAF-201ENST00000288602 TUBGCP5Q96RT8 1024 aa18.97■□□□□ 0.63
BRAF-201ENST00000288602 NUSAP1Q9BXS6 441 aaKnown RBP18.97■□□□□ 0.63
BRAF-201ENST00000288602 SPATS2LQ9NUQ6 558 aaKnown RBP18.97■□□□□ 0.63
BRAF-201ENST00000288602 CD300AQ9UGN4 299 aa18.97■□□□□ 0.63
BRAF-201ENST00000288602 TMPRSS11EQ9UL52 423 aa18.97■□□□□ 0.63
BRAF-201ENST00000288602 PLXNB3Q9ULL4 1909 aa18.97■□□□□ 0.63
BRAF-201ENST00000288602 SYN1P17600 705 aa18.97■□□□□ 0.63
BRAF-201ENST00000288602 CCR7P32248 378 aa18.97■□□□□ 0.63
BRAF-201ENST00000288602 NSG1P42857 185 aa18.97■□□□□ 0.63
BRAF-201ENST00000288602 ZNF77Q15935 545 aa18.97■□□□□ 0.63
BRAF-201ENST00000288602 AAK1Q2M2I8 961 aa18.97■□□□□ 0.63
BRAF-201ENST00000288602 PLA2G4EQ3MJ16 856 aa18.97■□□□□ 0.63
BRAF-201ENST00000288602 IL23RQ5VWK5 629 aa18.97■□□□□ 0.63
BRAF-201ENST00000288602 IRGCQ6NXR0 463 aa18.97■□□□□ 0.63
BRAF-201ENST00000288602 PCYOX1LQ8NBM8 494 aa18.97■□□□□ 0.63
BRAF-201ENST00000288602 SCAMP4Q969E2 229 aa18.97■□□□□ 0.63
BRAF-201ENST00000288602 PKP2Q99959 881 aa18.97■□□□□ 0.63
BRAF-201ENST00000288602 CPEB1Q9BZB8 566 aaKnown RBP18.97■□□□□ 0.63
BRAF-201ENST00000288602 PTBP2Q9UKA9 531 aaKnown RBP18.97■□□□□ 0.63
BRAF-201ENST00000288602 NDUFAF1Q9Y375 327 aa18.97■□□□□ 0.63
BRAF-201ENST00000288602 OARD1Q9Y530 152 aa18.97■□□□□ 0.63
BRAF-201ENST00000288602 KRT87PA6NCN2 255 aa18.96■□□□□ 0.63
BRAF-201ENST00000288602 AGAP14A8MT82 685 aa18.96■□□□□ 0.63
BRAF-201ENST00000288602 FFAR3O14843 346 aa18.96■□□□□ 0.63
BRAF-201ENST00000288602 GPR42O15529 346 aa18.96■□□□□ 0.63
BRAF-201ENST00000288602 SYNCRIPO60506 623 aaKnown RBP18.96■□□□□ 0.63
BRAF-201ENST00000288602 PAX7P23759 505 aa18.96■□□□□ 0.63
BRAF-201ENST00000288602 CASP2P42575 452 aa18.96■□□□□ 0.63
BRAF-201ENST00000288602 PPIGQ13427 754 aaKnown RBP eCLIP18.96■□□□□ 0.63
BRAF-201ENST00000288602 ABRAXAS2Q15018 415 aa18.96■□□□□ 0.63
BRAF-201ENST00000288602 C6orf136Q5SQH8 315 aa18.96■□□□□ 0.63
BRAF-201ENST00000288602 BLOC1S3Q6QNY0 202 aa18.96■□□□□ 0.63
BRAF-201ENST00000288602 GDPD4Q6W3E5 623 aa18.96■□□□□ 0.63
BRAF-201ENST00000288602 SFRP1Q8N474 314 aa18.96■□□□□ 0.63
BRAF-201ENST00000288602 PDPRQ8NCN5 879 aa18.96■□□□□ 0.63
BRAF-201ENST00000288602 LRRC3BQ96PB8 259 aa18.96■□□□□ 0.63
BRAF-201ENST00000288602 MCCC1Q96RQ3 725 aaPredicted RBP18.96■□□□□ 0.63
BRAF-201ENST00000288602 COPS8Q99627 209 aa18.96■□□□□ 0.63
BRAF-201ENST00000288602 TMEM79Q9BSE2 394 aa18.96■□□□□ 0.63
BRAF-201ENST00000288602 WWOXQ9NZC7 414 aa18.96■□□□□ 0.63
BRAF-201ENST00000288602 SUCOQ9UBS9 1254 aaKnown RBP18.96■□□□□ 0.63
BRAF-201ENST00000288602 PPIL1Q9Y3C6 166 aa18.96■□□□□ 0.63
BRAF-201ENST00000288602 VPS4BO75351 444 aa18.96■□□□□ 0.63
BRAF-201ENST00000288602 LEFTY1O75610 366 aa18.96■□□□□ 0.63
BRAF-201ENST00000288602 SMNDC1O75940 238 aaKnown RBP eCLIP18.96■□□□□ 0.63
BRAF-201ENST00000288602 CEBPBP17676 345 aa18.96■□□□□ 0.63
BRAF-201ENST00000288602 PFKLP17858 780 aa18.96■□□□□ 0.63
BRAF-201ENST00000288602 SOX11P35716 441 aa18.96■□□□□ 0.63
BRAF-201ENST00000288602 ZFP36L2P47974 494 aaKnown RBP18.96■□□□□ 0.63
BRAF-201ENST00000288602 PSMD8P48556 350 aa18.96■□□□□ 0.63
BRAF-201ENST00000288602 GSTA3Q16772 222 aa18.96■□□□□ 0.63
BRAF-201ENST00000288602 C6orf10Q5SRN2 563 aa18.96■□□□□ 0.63
BRAF-201ENST00000288602 LYPLAL1Q5VWZ2 237 aa18.96■□□□□ 0.63
BRAF-201ENST00000288602 LRGUKQ96M69 825 aa18.96■□□□□ 0.63
BRAF-201ENST00000288602 SLC52A3Q9NQ40 469 aa18.96■□□□□ 0.63
BRAF-201ENST00000288602 AIG1Q9NVV5 245 aa18.96■□□□□ 0.63
BRAF-201ENST00000288602 ZDHHC3Q9NYG2 299 aa18.96■□□□□ 0.63
BRAF-201ENST00000288602 SLAMF8Q9P0V8 285 aa18.96■□□□□ 0.63
BRAF-201ENST00000288602 DLGAP2Q9P1A6 1054 aa18.96■□□□□ 0.63
BRAF-201ENST00000288602 PRKAG2Q9UGJ0 569 aa18.96■□□□□ 0.63
BRAF-201ENST00000288602 TMCO1Q9UM00 188 aa18.96■□□□□ 0.63
BRAF-201ENST00000288602 AK5Q9Y6K8 562 aa18.96■□□□□ 0.63
BRAF-201ENST00000288602 NME4O00746 187 aa18.95■□□□□ 0.62
BRAF-201ENST00000288602 CASQ2O14958 399 aaPredicted RBP18.95■□□□□ 0.62
BRAF-201ENST00000288602 RNASEH2AO75792 299 aaKnown RBP18.95■□□□□ 0.62
BRAF-201ENST00000288602 MATN4O95460 622 aa18.95■□□□□ 0.62
BRAF-201ENST00000288602 SPINT3P49223 89 aa18.95■□□□□ 0.62
BRAF-201ENST00000288602 HSPA14Q0VDF9 509 aa18.95■□□□□ 0.62
BRAF-201ENST00000288602 TRAF3Q13114 568 aa18.95■□□□□ 0.62
BRAF-201ENST00000288602 ARHGEF7Q14155 803 aa18.95■□□□□ 0.62
BRAF-201ENST00000288602 ARSIQ5FYB1 569 aa18.95■□□□□ 0.62
BRAF-201ENST00000288602 OGFOD2Q6N063 350 aa18.95■□□□□ 0.62
BRAF-201ENST00000288602 ELMSAN1Q6PJG2 1045 aa18.95■□□□□ 0.62
BRAF-201ENST00000288602 MILR1Q7Z6M3 343 aa18.95■□□□□ 0.62
BRAF-201ENST00000288602 SKA2Q8WVK7 121 aaPredicted RBP18.95■□□□□ 0.62
BRAF-201ENST00000288602 SPDL1Q96EA4 605 aa18.95■□□□□ 0.62
BRAF-201ENST00000288602 SPATA16Q9BXB7 569 aa18.95■□□□□ 0.62
BRAF-201ENST00000288602 C6orf203Q9P0P8 240 aaPredicted RBP18.95■□□□□ 0.62
BRAF-201ENST00000288602 BCAP29Q9UHQ4 241 aa18.95■□□□□ 0.62
BRAF-201ENST00000288602 RIMS3Q9UJD0 308 aa18.95■□□□□ 0.62
BRAF-201ENST00000288602 ERVW-1Q9UQF0 538 aa18.95■□□□□ 0.62
BRAF-201ENST00000288602 TNPO3Q9Y5L0 923 aaKnown RBP18.95■□□□□ 0.62
BRAF-201ENST00000288602 DPPA5A6NC42 116 aa18.95■□□□□ 0.62
BRAF-201ENST00000288602 ASPDHA6ND91 283 aa18.95■□□□□ 0.62
BRAF-201ENST00000288602 VCLP18206 1134 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms