RNA–Protein interactions for RNA: ENST00000287814.4

TIMP4-201, Transcript of TIMP metallopeptidase inhibitor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP4, Length 1,650 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP4-201ENST00000287814 A0A0G2JNG1 304 aa19.48■□□□□ 0.71
TIMP4-201ENST00000287814 C17orf113A0A1B0GUU1 675 aa19.48■□□□□ 0.71
TIMP4-201ENST00000287814 A0A1W2PQM1 296 aa19.48■□□□□ 0.71
TIMP4-201ENST00000287814 RHPN2P1A8MT19 583 aa19.48■□□□□ 0.71
TIMP4-201ENST00000287814 IQCF5A8MTL0 148 aa19.48■□□□□ 0.71
TIMP4-201ENST00000287814 KIR2DS3K7RE56 304 aa19.48■□□□□ 0.71
TIMP4-201ENST00000287814 CDK4P11802 303 aa19.48■□□□□ 0.71
TIMP4-201ENST00000287814 PNLIPP16233 465 aa19.48■□□□□ 0.71
TIMP4-201ENST00000287814 PLTPP55058 493 aa19.48■□□□□ 0.71
TIMP4-201ENST00000287814 UBE2IP63279 158 aaKnown RBP19.48■□□□□ 0.71
TIMP4-201ENST00000287814 CCL7P80098 99 aa19.48■□□□□ 0.71
TIMP4-201ENST00000287814 PDIA2Q13087 525 aaKnown RBP19.48■□□□□ 0.71
TIMP4-201ENST00000287814 CBLBQ13191 982 aa19.48■□□□□ 0.71
TIMP4-201ENST00000287814 KIR2DS5Q14953 304 aa19.48■□□□□ 0.71
TIMP4-201ENST00000287814 HES3Q5TGS1 186 aa19.48■□□□□ 0.71
TIMP4-201ENST00000287814 UNC5AQ6ZN44 842 aa19.48■□□□□ 0.71
TIMP4-201ENST00000287814 TMPRSS7Q7RTY8 843 aa19.48■□□□□ 0.71
TIMP4-201ENST00000287814 CILP2Q8IUL8 1156 aa19.48■□□□□ 0.71
TIMP4-201ENST00000287814 DENND6AQ8IWF6 608 aa19.48■□□□□ 0.71
TIMP4-201ENST00000287814 HM13Q8TCT9 377 aa19.48■□□□□ 0.71
TIMP4-201ENST00000287814 LKAAEAR1Q8TD35 194 aa19.48■□□□□ 0.71
TIMP4-201ENST00000287814 CARD6Q9BX69 1037 aa19.48■□□□□ 0.71
TIMP4-201ENST00000287814 ABCG4Q9H172 646 aa19.48■□□□□ 0.71
TIMP4-201ENST00000287814 CPNE7Q9UBL6 633 aa19.48■□□□□ 0.71
TIMP4-201ENST00000287814 DMGDHQ9UI17 866 aaKnown RBP19.48■□□□□ 0.71
TIMP4-201ENST00000287814 OR5K4A6NMS3 321 aa19.47■□□□□ 0.71
TIMP4-201ENST00000287814 BHMG1C9JSJ3 638 aaPredicted RBP19.47■□□□□ 0.71
TIMP4-201ENST00000287814 PRMT5O14744 637 aaPredicted RBP19.47■□□□□ 0.71
TIMP4-201ENST00000287814 NDUFS3O75489 264 aa19.47■□□□□ 0.71
TIMP4-201ENST00000287814 ITGB6P18564 788 aa19.47■□□□□ 0.71
TIMP4-201ENST00000287814 XRCC1P18887 633 aaPredicted RBP19.47■□□□□ 0.71
TIMP4-201ENST00000287814 PPARGP37231 505 aaPredicted RBP19.47■□□□□ 0.71
TIMP4-201ENST00000287814 OR1D5P58170 312 aa19.47■□□□□ 0.71
TIMP4-201ENST00000287814 HHEXQ03014 270 aa19.47■□□□□ 0.71
TIMP4-201ENST00000287814 CTBP1Q13363 440 aa19.47■□□□□ 0.71
TIMP4-201ENST00000287814 NR1D2Q14995 579 aa19.47■□□□□ 0.71
TIMP4-201ENST00000287814 HSP90AA5PQ58FG0 334 aa19.47■□□□□ 0.71
TIMP4-201ENST00000287814 CDCP2Q5VXM1 449 aa19.47■□□□□ 0.71
TIMP4-201ENST00000287814 SPRED1Q7Z699 444 aa19.47■□□□□ 0.71
TIMP4-201ENST00000287814 SDCCAG8Q86SQ7 713 aaPredicted RBP19.47■□□□□ 0.71
TIMP4-201ENST00000287814 FBXO25Q8TCJ0 367 aa19.47■□□□□ 0.71
TIMP4-201ENST00000287814 SEC14L1Q92503 715 aa19.47■□□□□ 0.71
TIMP4-201ENST00000287814 LRRC39Q96DD0 335 aa19.47■□□□□ 0.71
TIMP4-201ENST00000287814 NAT9Q9BTE0 207 aa19.47■□□□□ 0.71
TIMP4-201ENST00000287814 WWP1Q9H0M0 922 aa19.47■□□□□ 0.71
TIMP4-201ENST00000287814 COG4Q9H9E3 785 aa19.47■□□□□ 0.71
TIMP4-201ENST00000287814 SARS2Q9NP81 518 aaKnown RBP19.47■□□□□ 0.71
TIMP4-201ENST00000287814 ZC3H7BQ9UGR2 993 aaKnown RBP19.47■□□□□ 0.71
TIMP4-201ENST00000287814 KLHL33A6NCF5 533 aa19.46■□□□□ 0.71
TIMP4-201ENST00000287814 NTN3O00634 580 aaPredicted RBP19.46■□□□□ 0.71
TIMP4-201ENST00000287814 S1PR4O95977 384 aa19.46■□□□□ 0.71
TIMP4-201ENST00000287814 OR56A5P0C7T3 313 aa19.46■□□□□ 0.71
TIMP4-201ENST00000287814 ERVK-10P10266 1014 aa19.46■□□□□ 0.71
TIMP4-201ENST00000287814 OGNP20774 298 aaKnown RBP19.46■□□□□ 0.71
TIMP4-201ENST00000287814 PDHA2P29803 388 aa19.46■□□□□ 0.71
TIMP4-201ENST00000287814 THOC5Q13769 683 aaKnown RBP19.46■□□□□ 0.71
TIMP4-201ENST00000287814 RPE65Q16518 533 aa19.46■□□□□ 0.71
TIMP4-201ENST00000287814 SPANXN3Q5MJ09 141 aa19.46■□□□□ 0.71
TIMP4-201ENST00000287814 ZNF470Q6ECI4 717 aa19.46■□□□□ 0.71
TIMP4-201ENST00000287814 SLC9B2Q86UD5 537 aa19.46■□□□□ 0.71
TIMP4-201ENST00000287814 CCNJLQ8IV13 435 aa19.46■□□□□ 0.71
TIMP4-201ENST00000287814 LPGAT1Q92604 370 aa19.46■□□□□ 0.71
TIMP4-201ENST00000287814 CFAP36Q96G28 342 aa19.46■□□□□ 0.71
TIMP4-201ENST00000287814 BIRC8Q96P09 236 aa19.46■□□□□ 0.71
TIMP4-201ENST00000287814 INSM2Q96T92 566 aaPredicted RBP19.46■□□□□ 0.71
TIMP4-201ENST00000287814 TCF12Q99081 682 aa19.46■□□□□ 0.71
TIMP4-201ENST00000287814 ACSL5Q9ULC5 683 aa19.46■□□□□ 0.71
TIMP4-201ENST00000287814 CFAP20Q9Y6A4 193 aaKnown RBP19.46■□□□□ 0.71
TIMP4-201ENST00000287814 NDC80O14777 642 aa19.46■□□□□ 0.71
TIMP4-201ENST00000287814 TTC4O95801 387 aa19.46■□□□□ 0.71
TIMP4-201ENST00000287814 MT-CO3P00414 261 aa19.46■□□□□ 0.71
TIMP4-201ENST00000287814 RPLP0P05388 317 aaKnown RBP19.46■□□□□ 0.71
TIMP4-201ENST00000287814 SLC2A4P14672 509 aa19.46■□□□□ 0.71
TIMP4-201ENST00000287814 ALDH4A1P30038 563 aa19.46■□□□□ 0.71
TIMP4-201ENST00000287814 PREPP48147 710 aa19.46■□□□□ 0.71
TIMP4-201ENST00000287814 GUCY2DQ02846 1103 aa19.46■□□□□ 0.71
TIMP4-201ENST00000287814 BIRC2Q13490 618 aa19.46■□□□□ 0.71
TIMP4-201ENST00000287814 TRMT10BQ6PF06 316 aaKnown RBP19.46■□□□□ 0.71
TIMP4-201ENST00000287814 TMPRSS12Q86WS5 348 aa19.46■□□□□ 0.71
TIMP4-201ENST00000287814 KRT222Q8N1A0 295 aa19.46■□□□□ 0.71
TIMP4-201ENST00000287814 CEP112Q8N8E3 955 aa19.46■□□□□ 0.71
TIMP4-201ENST00000287814 LRRN4CLQ8ND94 238 aa19.46■□□□□ 0.71
TIMP4-201ENST00000287814 FBXO36Q8NEA4 188 aa19.46■□□□□ 0.71
TIMP4-201ENST00000287814 LRRN3Q9H3W5 708 aa19.46■□□□□ 0.71
TIMP4-201ENST00000287814 VPS37BQ9H9H4 285 aa19.46■□□□□ 0.71
TIMP4-201ENST00000287814 IARS2Q9NSE4 1012 aaKnown RBP19.46■□□□□ 0.71
TIMP4-201ENST00000287814 CRYL1Q9Y2S2 319 aa19.46■□□□□ 0.71
TIMP4-201ENST00000287814 PIKFYVEQ9Y2I7 2098 aa19.45■□□□□ 0.7
TIMP4-201ENST00000287814 PTPRBP23467 1997 aa19.45■□□□□ 0.7
TIMP4-201ENST00000287814 UBA6A0AVT1 1052 aaPredicted RBP19.45■□□□□ 0.7
TIMP4-201ENST00000287814 QSOX1O00391 747 aa19.45■□□□□ 0.7
TIMP4-201ENST00000287814 FTH1P02794 183 aa19.45■□□□□ 0.7
TIMP4-201ENST00000287814 RPS3P23396 243 aaKnown RBP eCLIP19.45■□□□□ 0.75e-7■■■□□ 15.2
TIMP4-201ENST00000287814 FMO4P31512 558 aa19.45■□□□□ 0.7
TIMP4-201ENST00000287814 CCR7P32248 378 aa19.45■□□□□ 0.7
TIMP4-201ENST00000287814 SLC1A2P43004 574 aa19.45■□□□□ 0.7
TIMP4-201ENST00000287814 EIF3BP55884 814 aaKnown RBP19.45■□□□□ 0.7
TIMP4-201ENST00000287814 BRD3Q15059 726 aa19.45■□□□□ 0.7
TIMP4-201ENST00000287814 CTSL3PQ5NE16 218 aa19.45■□□□□ 0.7
TIMP4-201ENST00000287814 STEAP4Q687X5 459 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms