RNA–Protein interactions for RNA: ENST00000279550.11

YBX3-202, Transcript of Y-box binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene YBX3, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-202ENST00000279550 ANKS6Q68DC2 871 aa20.65■□□□□ 0.9
YBX3-202ENST00000279550 MACC1Q6ZN28 852 aa20.65■□□□□ 0.9
YBX3-202ENST00000279550 CHPFQ8IZ52 775 aa20.65■□□□□ 0.9
YBX3-202ENST00000279550 CLYBLQ8N0X4 340 aa20.65■□□□□ 0.9
YBX3-202ENST00000279550 HMGCLL1Q8TB92 370 aa20.65■□□□□ 0.9
YBX3-202ENST00000279550 OR8D1Q8WZ84 308 aa20.65■□□□□ 0.9
YBX3-202ENST00000279550 TTC1Q99614 292 aa20.65■□□□□ 0.9
YBX3-202ENST00000279550 RTKNQ9BST9 563 aa20.65■□□□□ 0.9
YBX3-202ENST00000279550 C1QTNF3Q9BXJ4 246 aa20.65■□□□□ 0.9
YBX3-202ENST00000279550 ZBTB26Q9HCK0 441 aa20.65■□□□□ 0.9
YBX3-202ENST00000279550 SEMA4BQ9NPR2 832 aaPredicted RBP20.65■□□□□ 0.9
YBX3-202ENST00000279550 SLC2A4RGQ9NR83 387 aa20.65■□□□□ 0.9
YBX3-202ENST00000279550 UTP6Q9NYH9 597 aaKnown RBP20.65■□□□□ 0.9
YBX3-202ENST00000279550 CD274Q9NZQ7 290 aa20.65■□□□□ 0.9
YBX3-202ENST00000279550 SLC7A8Q9UHI5 535 aa20.65■□□□□ 0.9
YBX3-202ENST00000279550 AZIN1O14977 448 aa20.64■□□□□ 0.9
YBX3-202ENST00000279550 NPC1O15118 1278 aa20.64■□□□□ 0.9
YBX3-202ENST00000279550 EPHX1P07099 455 aa20.64■□□□□ 0.9
YBX3-202ENST00000279550 FGF4P08620 206 aa20.64■□□□□ 0.9
YBX3-202ENST00000279550 GLULP15104 373 aa20.64■□□□□ 0.9
YBX3-202ENST00000279550 TIMP2P16035 220 aa20.64■□□□□ 0.9
YBX3-202ENST00000279550 SPINT3P49223 89 aa20.64■□□□□ 0.9
YBX3-202ENST00000279550 SEC13P55735 322 aa20.64■□□□□ 0.9
YBX3-202ENST00000279550 LCP2Q13094 533 aa20.64■□□□□ 0.9
YBX3-202ENST00000279550 C18orf21Q32NC0 220 aaPredicted RBP20.64■□□□□ 0.9
YBX3-202ENST00000279550 SBSNQ6UWP8 590 aa20.64■□□□□ 0.9
YBX3-202ENST00000279550 ASB2Q96Q27 587 aa20.64■□□□□ 0.9
YBX3-202ENST00000279550 ZDHHC3Q9NYG2 299 aa20.64■□□□□ 0.9
YBX3-202ENST00000279550 SUN2Q9UH99 717 aa20.64■□□□□ 0.9
YBX3-202ENST00000279550 EIF2B4Q9UI10 523 aaKnown RBP20.64■□□□□ 0.9
YBX3-202ENST00000279550 CD84Q9UIB8 345 aa20.64■□□□□ 0.9
YBX3-202ENST00000279550 DNAJC15Q9Y5T4 150 aa20.64■□□□□ 0.9
YBX3-202ENST00000279550 STON1Q9Y6Q2 735 aa20.64■□□□□ 0.9
YBX3-202ENST00000279550 TSPAN11A1L157 253 aa20.64■□□□□ 0.89
YBX3-202ENST00000279550 RGSL1A5PLK6 1076 aa20.64■□□□□ 0.89
YBX3-202ENST00000279550 EGFP01133 1207 aa20.64■□□□□ 0.89
YBX3-202ENST00000279550 PRNPP04156 253 aa20.64■□□□□ 0.89
YBX3-202ENST00000279550 THRAP10827 490 aa20.64■□□□□ 0.89
YBX3-202ENST00000279550 TIE1P35590 1138 aa20.64■□□□□ 0.89
YBX3-202ENST00000279550 POLR2LP62875 67 aaKnown RBP20.64■□□□□ 0.89
YBX3-202ENST00000279550 GRSF1Q12849 480 aaKnown RBP eCLIP20.64■□□□□ 0.89
YBX3-202ENST00000279550 HERC3Q15034 1050 aa20.64■□□□□ 0.89
YBX3-202ENST00000279550 ZNF805Q5CZA5 627 aa20.64■□□□□ 0.89
YBX3-202ENST00000279550 GPRC6AQ5T6X5 926 aa20.64■□□□□ 0.89
YBX3-202ENST00000279550 ZBTB2Q8N680 514 aa20.64■□□□□ 0.89
YBX3-202ENST00000279550 NUDT4Q9NZJ9 180 aa20.64■□□□□ 0.89
YBX3-202ENST00000279550 ATP6AP2A0A1C7CYW4 349 aa20.63■□□□□ 0.89
YBX3-202ENST00000279550 H0Y3Z8 333 aa20.63■□□□□ 0.89
YBX3-202ENST00000279550 ATP6AP2O75787 350 aa20.63■□□□□ 0.89
YBX3-202ENST00000279550 KRT36O76013 467 aa20.63■□□□□ 0.89
YBX3-202ENST00000279550 DRD1P21728 446 aa20.63■□□□□ 0.89
YBX3-202ENST00000279550 PRDX3P30048 256 aaKnown RBP20.63■□□□□ 0.89
YBX3-202ENST00000279550 ADSLP30566 484 aaPredicted RBP20.63■□□□□ 0.89
YBX3-202ENST00000279550 VIPR1P32241 457 aa20.63■□□□□ 0.89
YBX3-202ENST00000279550 TGFBIQ15582 683 aa20.63■□□□□ 0.89
YBX3-202ENST00000279550 HSD11B1LQ7Z5J1 315 aa20.63■□□□□ 0.89
YBX3-202ENST00000279550 SYVN1Q86TM6 617 aa20.63■□□□□ 0.89
YBX3-202ENST00000279550 DEFB107AQ8IZN7 70 aa20.63■□□□□ 0.89
YBX3-202ENST00000279550 EFCAB3Q8N7B9 438 aa20.63■□□□□ 0.89
YBX3-202ENST00000279550 ENDOVQ8N8Q3 282 aaKnown RBP20.63■□□□□ 0.89
YBX3-202ENST00000279550 TMIEQ8NEW7 156 aa20.63■□□□□ 0.89
YBX3-202ENST00000279550 HCAR2Q8TDS4 363 aa20.63■□□□□ 0.89
YBX3-202ENST00000279550 TWIST2Q8WVJ9 160 aa20.63■□□□□ 0.89
YBX3-202ENST00000279550 C19orf60Q96EN9 201 aa20.63■□□□□ 0.89
YBX3-202ENST00000279550 MSANTD3Q96H12 275 aa20.63■□□□□ 0.89
YBX3-202ENST00000279550 PANX3Q96QZ0 392 aa20.63■□□□□ 0.89
YBX3-202ENST00000279550 FAM129BQ96TA1 746 aa20.63■□□□□ 0.89
YBX3-202ENST00000279550 TUBB1Q9H4B7 451 aa20.63■□□□□ 0.89
YBX3-202ENST00000279550 PCDH12Q9NPG4 1184 aa20.63■□□□□ 0.89
YBX3-202ENST00000279550 PRSS16Q9NQE7 514 aa20.63■□□□□ 0.89
YBX3-202ENST00000279550 DKK3Q9UBP4 350 aa20.63■□□□□ 0.89
YBX3-202ENST00000279550 GIMAP2Q9UG22 337 aa20.63■□□□□ 0.89
YBX3-202ENST00000279550 MBD1Q9UIS9 605 aaPredicted RBP20.63■□□□□ 0.89
YBX3-202ENST00000279550 ADAMTS6Q9UKP5 1117 aa20.63■□□□□ 0.89
YBX3-202ENST00000279550 SARDHQ9UL12 918 aa20.63■□□□□ 0.89
YBX3-202ENST00000279550 PPM1HQ9ULR3 514 aa20.63■□□□□ 0.89
YBX3-202ENST00000279550 TCF20Q9UGU0 1960 aaKnown RBP20.62■□□□□ 0.89
YBX3-202ENST00000279550 PIP5K1BO14986 540 aa20.62■□□□□ 0.89
YBX3-202ENST00000279550 SNX2O60749 519 aa20.62■□□□□ 0.89
YBX3-202ENST00000279550 SORBS2O94875 1100 aaKnown RBP20.62■□□□□ 0.89
YBX3-202ENST00000279550 CYLC2Q14093 348 aaPredicted RBP20.62■□□□□ 0.89
YBX3-202ENST00000279550 POM121L1PQ3SYA9 428 aa20.62■□□□□ 0.89
YBX3-202ENST00000279550 PGM2L1Q6PCE3 622 aa20.62■□□□□ 0.89
YBX3-202ENST00000279550 RIPOR1Q6ZS17 1223 aa20.62■□□□□ 0.89
YBX3-202ENST00000279550 GK5Q6ZS86 529 aa20.62■□□□□ 0.89
YBX3-202ENST00000279550 LARP4Q71RC2 724 aaKnown RBP eCLIP20.62■□□□□ 0.894e-6■■□□□ 12.8
YBX3-202ENST00000279550 NET1Q7Z628 596 aaPredicted RBP20.62■□□□□ 0.89
YBX3-202ENST00000279550 KIRREL3Q8IZU9 778 aa20.62■□□□□ 0.89
YBX3-202ENST00000279550 SNX31Q8N9S9 440 aa20.62■□□□□ 0.89
YBX3-202ENST00000279550 RP9Q8TA86 221 aaKnown RBP20.62■□□□□ 0.89
YBX3-202ENST00000279550 RCN3Q96D15 328 aa20.62■□□□□ 0.89
YBX3-202ENST00000279550 ZNF225Q9UK10 706 aa20.62■□□□□ 0.89
YBX3-202ENST00000279550 TMCO1Q9UM00 188 aa20.62■□□□□ 0.89
YBX3-202ENST00000279550 BTRCQ9Y297 605 aa20.62■□□□□ 0.89
YBX3-202ENST00000279550 MYO10Q9HD67 2058 aa20.62■□□□□ 0.89
YBX3-202ENST00000279550 IGLV3-16A0A075B6K0 115 aa20.61■□□□□ 0.89
YBX3-202ENST00000279550 UPK3BL1B0FP48 263 aa20.61■□□□□ 0.89
YBX3-202ENST00000279550 UPK3BL2E5RIL1 263 aa20.61■□□□□ 0.89
YBX3-202ENST00000279550 KPNA3O00505 521 aaPredicted RBP20.61■□□□□ 0.89
YBX3-202ENST00000279550 AIM2O14862 343 aa20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms