RNA–Protein interactions for RNA: ENST00000279247.10

CAPN1-201, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-201ENST00000279247 MTFMTQ96DP5 389 aaKnown RBP17.67■□□□□ 0.42
CAPN1-201ENST00000279247 ASB2Q96Q27 587 aa17.67■□□□□ 0.42
CAPN1-201ENST00000279247 HEPHQ9BQS7 1158 aa17.67■□□□□ 0.42
CAPN1-201ENST00000279247 IPPKQ9H8X2 491 aa17.67■□□□□ 0.42
CAPN1-201ENST00000279247 PCDH12Q9NPG4 1184 aa17.67■□□□□ 0.42
CAPN1-201ENST00000279247 OTOL1A6NHN0 477 aaPredicted RBP17.66■□□□□ 0.42
CAPN1-201ENST00000279247 INPP4BO15327 924 aa17.66■□□□□ 0.42
CAPN1-201ENST00000279247 MAP3K7O43318 606 aa17.66■□□□□ 0.42
CAPN1-201ENST00000279247 ESRRBO95718 433 aa17.66■□□□□ 0.42
CAPN1-201ENST00000279247 LBPP18428 481 aa17.66■□□□□ 0.42
CAPN1-201ENST00000279247 DGKAP23743 735 aa17.66■□□□□ 0.42
CAPN1-201ENST00000279247 SPINT3P49223 89 aa17.66■□□□□ 0.42
CAPN1-201ENST00000279247 CLNS1AP54105 237 aaKnown RBP17.66■□□□□ 0.42
CAPN1-201ENST00000279247 ADARP55265 1226 aaKnown RBP17.66■□□□□ 0.42
CAPN1-201ENST00000279247 CYP2R1Q6VVX0 501 aa17.66■□□□□ 0.42
CAPN1-201ENST00000279247 SPATA24Q86W54 205 aa17.66■□□□□ 0.42
CAPN1-201ENST00000279247 OR2T11Q8NH01 316 aa17.66■□□□□ 0.42
CAPN1-201ENST00000279247 ZNHIT2Q9UHR6 403 aa17.66■□□□□ 0.42
CAPN1-201ENST00000279247 EPOPA6NHQ4 379 aa17.66■□□□□ 0.42
CAPN1-201ENST00000279247 WASH3PC4AMC7 463 aa17.66■□□□□ 0.42
CAPN1-201ENST00000279247 DNAJA2O60884 412 aa17.66■□□□□ 0.42
CAPN1-201ENST00000279247 DDX6P26196 483 aaKnown RBP eCLIP17.66■□□□□ 0.42
CAPN1-201ENST00000279247 CCR7P32248 378 aa17.66■□□□□ 0.42
CAPN1-201ENST00000279247 STX5Q13190 355 aa17.66■□□□□ 0.42
CAPN1-201ENST00000279247 GTF2H2Q13888 395 aa17.66■□□□□ 0.42
CAPN1-201ENST00000279247 GPRC6AQ5T6X5 926 aa17.66■□□□□ 0.42
CAPN1-201ENST00000279247 GTF2H2CQ6P1K8 395 aa17.66■□□□□ 0.42
CAPN1-201ENST00000279247 GET4Q7L5D6 327 aaPredicted RBP17.66■□□□□ 0.42
CAPN1-201ENST00000279247 AHI1Q8N157 1196 aa17.66■□□□□ 0.42
CAPN1-201ENST00000279247 FNDC5Q8NAU1 212 aa17.66■□□□□ 0.42
CAPN1-201ENST00000279247 OR4F6Q8NGB9 312 aa17.66■□□□□ 0.42
CAPN1-201ENST00000279247 PYCR2Q96C36 320 aa17.66■□□□□ 0.42
CAPN1-201ENST00000279247 TEX37Q96LM6 180 aa17.66■□□□□ 0.42
CAPN1-201ENST00000279247 COQ6Q9Y2Z9 468 aa17.66■□□□□ 0.42
CAPN1-201ENST00000279247 STX16O14662 325 aa17.66■□□□□ 0.42
CAPN1-201ENST00000279247 NRP2O60462 931 aa17.66■□□□□ 0.42
CAPN1-201ENST00000279247 MLYCDO95822 493 aa17.66■□□□□ 0.42
CAPN1-201ENST00000279247 FGF4P08620 206 aa17.66■□□□□ 0.42
CAPN1-201ENST00000279247 ADH5P11766 374 aa17.66■□□□□ 0.42
CAPN1-201ENST00000279247 NSG1P42857 185 aa17.66■□□□□ 0.42
CAPN1-201ENST00000279247 GRIN2CQ14957 1233 aa17.66■□□□□ 0.42
CAPN1-201ENST00000279247 IZUMO2Q6UXV1 221 aa17.66■□□□□ 0.42
CAPN1-201ENST00000279247 PHOSPHO2Q8TCD6 241 aa17.66■□□□□ 0.42
CAPN1-201ENST00000279247 ZNF483Q8TF39 744 aaPredicted RBP17.66■□□□□ 0.42
CAPN1-201ENST00000279247 NXPE3Q969Y0 559 aa17.66■□□□□ 0.42
CAPN1-201ENST00000279247 SPATS2LQ9NUQ6 558 aaKnown RBP17.66■□□□□ 0.42
CAPN1-201ENST00000279247 TULP3O75386 442 aa17.65■□□□□ 0.42
CAPN1-201ENST00000279247 CRY1Q16526 586 aa17.65■□□□□ 0.42
CAPN1-201ENST00000279247 PIGGQ5H8A4 983 aa17.65■□□□□ 0.42
CAPN1-201ENST00000279247 TXNDC11Q6PKC3 985 aa17.65■□□□□ 0.42
CAPN1-201ENST00000279247 RETREG3Q86VR2 466 aa17.65■□□□□ 0.42
CAPN1-201ENST00000279247 VRK3Q8IV63 474 aa17.65■□□□□ 0.42
CAPN1-201ENST00000279247 MIER2Q8N344 545 aa17.65■□□□□ 0.42
CAPN1-201ENST00000279247 ISG20Q96AZ6 181 aaKnown RBP17.65■□□□□ 0.42
CAPN1-201ENST00000279247 PBX4Q9BYU1 374 aa17.65■□□□□ 0.42
CAPN1-201ENST00000279247 MTIF3Q9H2K0 278 aaKnown RBP17.65■□□□□ 0.42
CAPN1-201ENST00000279247 NKX2-4Q9H2Z4 354 aa17.65■□□□□ 0.42
CAPN1-201ENST00000279247 NUDT4Q9NZJ9 180 aa17.65■□□□□ 0.42
CAPN1-201ENST00000279247 TMPRSS11EQ9UL52 423 aa17.65■□□□□ 0.42
CAPN1-201ENST00000279247 F5P12259 2224 aa17.65■□□□□ 0.42
CAPN1-201ENST00000279247 HELZP42694 1942 aaKnown RBP17.65■□□□□ 0.42
CAPN1-201ENST00000279247 ME2P23368 584 aa17.65■□□□□ 0.42
CAPN1-201ENST00000279247 PBLDP30039 288 aaPredicted RBP17.65■□□□□ 0.42
CAPN1-201ENST00000279247 YBX1P67809 324 aaKnown RBP17.65■□□□□ 0.42
CAPN1-201ENST00000279247 ILF2Q12905 390 aaKnown RBP17.65■□□□□ 0.42
CAPN1-201ENST00000279247 TRIP10Q15642 601 aa17.65■□□□□ 0.42
CAPN1-201ENST00000279247 ZNF423Q2M1K9 1284 aa17.65■□□□□ 0.42
CAPN1-201ENST00000279247 GPR33Q49SQ1 333 aa17.65■□□□□ 0.42
CAPN1-201ENST00000279247 TUBGCP5Q96RT8 1024 aa17.65■□□□□ 0.42
CAPN1-201ENST00000279247 RIOK2Q9BVS4 552 aaKnown RBP17.65■□□□□ 0.42
CAPN1-201ENST00000279247 ZDHHC3Q9NYG2 299 aa17.65■□□□□ 0.42
CAPN1-201ENST00000279247 PCDHGA7Q9Y5G6 932 aa17.65■□□□□ 0.42
CAPN1-201ENST00000279247 TRBV5-4A0A0C4DH59 114 aa17.64■□□□□ 0.41
CAPN1-201ENST00000279247 GPX3P22352 226 aa17.64■□□□□ 0.41
CAPN1-201ENST00000279247 ADSLP30566 484 aaPredicted RBP17.64■□□□□ 0.41
CAPN1-201ENST00000279247 CCNG1P51959 295 aa17.64■□□□□ 0.41
CAPN1-201ENST00000279247 SLC7A2P52569 658 aa17.64■□□□□ 0.41
CAPN1-201ENST00000279247 POLR2LP62875 67 aaKnown RBP17.64■□□□□ 0.41
CAPN1-201ENST00000279247 AAK1Q2M2I8 961 aa17.64■□□□□ 0.41
CAPN1-201ENST00000279247 FOXJ1Q92949 421 aa17.64■□□□□ 0.41
CAPN1-201ENST00000279247 DCUN1D1Q96GG9 259 aa17.64■□□□□ 0.41
CAPN1-201ENST00000279247 MRGPRX3Q96LB0 322 aa17.64■□□□□ 0.41
CAPN1-201ENST00000279247 SLC25A23Q9BV35 468 aa17.64■□□□□ 0.41
CAPN1-201ENST00000279247 CPEB1Q9BZB8 566 aaKnown RBP17.64■□□□□ 0.41
CAPN1-201ENST00000279247 FARSBQ9NSD9 589 aaKnown RBP17.64■□□□□ 0.41
CAPN1-201ENST00000279247 ARL15Q9NXU5 204 aa17.64■□□□□ 0.41
CAPN1-201ENST00000279247 SLC8A2Q9UPR5 921 aa17.64■□□□□ 0.41
CAPN1-201ENST00000279247 TAPBPO15533 448 aa17.64■□□□□ 0.41
CAPN1-201ENST00000279247 SYNCRIPO60506 623 aaKnown RBP17.64■□□□□ 0.41
CAPN1-201ENST00000279247 FGF19O95750 216 aa17.64■□□□□ 0.41
CAPN1-201ENST00000279247 UROSP10746 265 aa17.64■□□□□ 0.41
CAPN1-201ENST00000279247 VCLP18206 1134 aa17.64■□□□□ 0.41
CAPN1-201ENST00000279247 CAPN3P20807 821 aa17.64■□□□□ 0.41
CAPN1-201ENST00000279247 HMOX2P30519 316 aa17.64■□□□□ 0.41
CAPN1-201ENST00000279247 HERC3Q15034 1050 aa17.64■□□□□ 0.41
CAPN1-201ENST00000279247 NR6A1Q15406 480 aa17.64■□□□□ 0.41
CAPN1-201ENST00000279247 MAPRE2Q15555 327 aa17.64■□□□□ 0.41
CAPN1-201ENST00000279247 RARS2Q5T160 578 aaKnown RBP17.64■□□□□ 0.41
CAPN1-201ENST00000279247 MILR1Q7Z6M3 343 aa17.64■□□□□ 0.41
CAPN1-201ENST00000279247 IFNEQ86WN2 208 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms