RNA–Protein interactions for RNA: ENST00000265036.9

DEPDC1B-201, Transcript of DEP domain containing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1B, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-201ENST00000265036 RPLP0P05388 317 aaKnown RBP7.11□□□□□ -1.27
DEPDC1B-201ENST00000265036 RHOXF2BP0C7M4 288 aa7.11□□□□□ -1.27
DEPDC1B-201ENST00000265036 ACP1P24666 158 aa7.11□□□□□ -1.27
DEPDC1B-201ENST00000265036 NSG1P42857 185 aa7.11□□□□□ -1.27
DEPDC1B-201ENST00000265036 INSM1Q01101 510 aaPredicted RBP7.11□□□□□ -1.27
DEPDC1B-201ENST00000265036 UBAP2Q5T6F2 1119 aaKnown RBP7.11□□□□□ -1.27
DEPDC1B-201ENST00000265036 DUPD1Q68J44 220 aa7.11□□□□□ -1.27
DEPDC1B-201ENST00000265036 KIAA0930Q6ICG6 404 aaPredicted RBP7.11□□□□□ -1.27
DEPDC1B-201ENST00000265036 XKR5Q6UX68 686 aa7.11□□□□□ -1.27
DEPDC1B-201ENST00000265036 UNC5AQ6ZN44 842 aa7.11□□□□□ -1.27
DEPDC1B-201ENST00000265036 USP53Q70EK8 1073 aa7.11□□□□□ -1.27
DEPDC1B-201ENST00000265036 ZNF572Q7Z3I7 529 aaPredicted RBP7.11□□□□□ -1.27
DEPDC1B-201ENST00000265036 TMPRSS9Q7Z410 1059 aa7.11□□□□□ -1.27
DEPDC1B-201ENST00000265036 B3GNT8Q7Z7M8 397 aa7.11□□□□□ -1.27
DEPDC1B-201ENST00000265036 PCGF5Q86SE9 256 aa7.11□□□□□ -1.27
DEPDC1B-201ENST00000265036 GLRX5Q86SX6 157 aa7.11□□□□□ -1.27
DEPDC1B-201ENST00000265036 KCNMB4Q86W47 210 aa7.11□□□□□ -1.27
DEPDC1B-201ENST00000265036 TRIM48Q8IWZ4 208 aa7.11□□□□□ -1.27
DEPDC1B-201ENST00000265036 SFRP1Q8N474 314 aa7.11□□□□□ -1.27
DEPDC1B-201ENST00000265036 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.11□□□□□ -1.27
DEPDC1B-201ENST00000265036 FBXO36Q8NEA4 188 aa7.11□□□□□ -1.27
DEPDC1B-201ENST00000265036 ELMO1Q92556 727 aa7.11□□□□□ -1.27
DEPDC1B-201ENST00000265036 GLMNQ92990 594 aa7.11□□□□□ -1.27
DEPDC1B-201ENST00000265036 RNF31Q96EP0 1072 aa7.11□□□□□ -1.27
DEPDC1B-201ENST00000265036 RHOXF2Q9BQY4 288 aa7.11□□□□□ -1.27
DEPDC1B-201ENST00000265036 TIMM29Q9BSF4 260 aa7.11□□□□□ -1.27
DEPDC1B-201ENST00000265036 TBC1D10AQ9BXI6 508 aa7.11□□□□□ -1.27
DEPDC1B-201ENST00000265036 WWP1Q9H0M0 922 aa7.11□□□□□ -1.27
DEPDC1B-201ENST00000265036 SAYSD1Q9NPB0 183 aa7.11□□□□□ -1.27
DEPDC1B-201ENST00000265036 IARS2Q9NSE4 1012 aaKnown RBP7.11□□□□□ -1.27
DEPDC1B-201ENST00000265036 ZC3H7BQ9UGR2 993 aaKnown RBP7.11□□□□□ -1.27
DEPDC1B-201ENST00000265036 KLHL3Q9UH77 587 aa7.11□□□□□ -1.27
DEPDC1B-201ENST00000265036 PCDHB1Q9Y5F3 818 aa7.11□□□□□ -1.27
DEPDC1B-201ENST00000265036 SMG1Q96Q15 3661 aaKnown RBP7.1□□□□□ -1.27
DEPDC1B-201ENST00000265036 A0A1W2PQM1 296 aa7.1□□□□□ -1.27
DEPDC1B-201ENST00000265036 FAM187AA6NFU0 413 aa7.1□□□□□ -1.27
DEPDC1B-201ENST00000265036 GPR89AB7ZAQ6 455 aa7.1□□□□□ -1.27
DEPDC1B-201ENST00000265036 AP3B1O00203 1094 aa7.1□□□□□ -1.27
DEPDC1B-201ENST00000265036 NDUFS3O75489 264 aa7.1□□□□□ -1.27
DEPDC1B-201ENST00000265036 GPR89BP0CG08 455 aa7.1□□□□□ -1.27
DEPDC1B-201ENST00000265036 TYRP1P17643 537 aa7.1□□□□□ -1.27
DEPDC1B-201ENST00000265036 PGAM1P18669 254 aa7.1□□□□□ -1.27
DEPDC1B-201ENST00000265036 PAMP19021 973 aa7.1□□□□□ -1.27
DEPDC1B-201ENST00000265036 IDSP22304 550 aa7.1□□□□□ -1.27
DEPDC1B-201ENST00000265036 FMO4P31512 558 aa7.1□□□□□ -1.27
DEPDC1B-201ENST00000265036 DEKP35659 375 aaKnown RBP7.1□□□□□ -1.27
DEPDC1B-201ENST00000265036 RPIAP49247 311 aa7.1□□□□□ -1.27
DEPDC1B-201ENST00000265036 ARL4CP56559 192 aa7.1□□□□□ -1.27
DEPDC1B-201ENST00000265036 CCL7P80098 99 aa7.1□□□□□ -1.27
DEPDC1B-201ENST00000265036 HSPA14Q0VDF9 509 aa7.1□□□□□ -1.27
DEPDC1B-201ENST00000265036 LAMB3Q13751 1172 aa7.1□□□□□ -1.27
DEPDC1B-201ENST00000265036 THOC5Q13769 683 aaKnown RBP7.1□□□□□ -1.27
DEPDC1B-201ENST00000265036 SYTL3Q4VX76 610 aa7.1□□□□□ -1.27
DEPDC1B-201ENST00000265036 NEPROQ6NW34 567 aa7.1□□□□□ -1.27
DEPDC1B-201ENST00000265036 FOXR1Q6PIV2 292 aa7.1□□□□□ -1.27
DEPDC1B-201ENST00000265036 LVRNQ6Q4G3 990 aa7.1□□□□□ -1.27
DEPDC1B-201ENST00000265036 ZDHHC24Q6UX98 284 aa7.1□□□□□ -1.27
DEPDC1B-201ENST00000265036 CENPUQ71F23 418 aa7.1□□□□□ -1.27
DEPDC1B-201ENST00000265036 SPRED1Q7Z699 444 aa7.1□□□□□ -1.27
DEPDC1B-201ENST00000265036 TMEM135Q86UB9 458 aa7.1□□□□□ -1.27
DEPDC1B-201ENST00000265036 CCNJLQ8IV13 435 aa7.1□□□□□ -1.27
DEPDC1B-201ENST00000265036 C9orf72Q96LT7 481 aa7.1□□□□□ -1.27
DEPDC1B-201ENST00000265036 C12orf66Q96MD2 445 aa7.1□□□□□ -1.27
DEPDC1B-201ENST00000265036 NDNQ99608 321 aa7.1□□□□□ -1.27
DEPDC1B-201ENST00000265036 EBNA1BP2Q99848 306 aaKnown RBP7.1□□□□□ -1.27
DEPDC1B-201ENST00000265036 NUDT22Q9BRQ3 303 aa7.1□□□□□ -1.27
DEPDC1B-201ENST00000265036 RAB17Q9H0T7 212 aa7.1□□□□□ -1.27
DEPDC1B-201ENST00000265036 MRM3Q9HC36 420 aaKnown RBP7.1□□□□□ -1.27
DEPDC1B-201ENST00000265036 ZNF624Q9P2J8 865 aaPredicted RBP7.1□□□□□ -1.27
DEPDC1B-201ENST00000265036 CPNE7Q9UBL6 633 aa7.1□□□□□ -1.27
DEPDC1B-201ENST00000265036 ITPR1Q14643 2758 aa7.1□□□□□ -1.27
DEPDC1B-201ENST00000265036 NBEAQ8NFP9 2946 aa7.1□□□□□ -1.27
DEPDC1B-201ENST00000265036 MGAT4DA6NG13 374 aa7.1□□□□□ -1.27
DEPDC1B-201ENST00000265036 PRMT5O14744 637 aaPredicted RBP7.1□□□□□ -1.27
DEPDC1B-201ENST00000265036 OPA1O60313 960 aa7.1□□□□□ -1.27
DEPDC1B-201ENST00000265036 USP1O94782 785 aa7.1□□□□□ -1.27
DEPDC1B-201ENST00000265036 SLC35G4P0C7Q5 338 aa7.1□□□□□ -1.27
DEPDC1B-201ENST00000265036 GLB1P16278 677 aa7.1□□□□□ -1.27
DEPDC1B-201ENST00000265036 VCLP18206 1134 aa7.1□□□□□ -1.27
DEPDC1B-201ENST00000265036 SSTR1P30872 391 aa7.1□□□□□ -1.27
DEPDC1B-201ENST00000265036 SLC19A1P41440 591 aa7.1□□□□□ -1.27
DEPDC1B-201ENST00000265036 TTPAP49638 278 aa7.1□□□□□ -1.27
DEPDC1B-201ENST00000265036 CUL1Q13616 776 aa7.1□□□□□ -1.27
DEPDC1B-201ENST00000265036 COL9A2Q14055 689 aaPredicted RBP7.1□□□□□ -1.27
DEPDC1B-201ENST00000265036 SPIDRQ14159 915 aa7.1□□□□□ -1.27
DEPDC1B-201ENST00000265036 LONRF1Q17RB8 773 aa7.1□□□□□ -1.27
DEPDC1B-201ENST00000265036 MAP9Q49MG5 647 aa7.1□□□□□ -1.27
DEPDC1B-201ENST00000265036 BCL7AQ4VC05 210 aa7.1□□□□□ -1.27
DEPDC1B-201ENST00000265036 DNAJC21Q5F1R6 531 aaKnown RBP7.1□□□□□ -1.27
DEPDC1B-201ENST00000265036 CTSL3PQ5NE16 218 aa7.1□□□□□ -1.27
DEPDC1B-201ENST00000265036 SNAP47Q5SQN1 464 aa7.1□□□□□ -1.27
DEPDC1B-201ENST00000265036 PTRHD1Q6GMV3 140 aaKnown RBP7.1□□□□□ -1.27
DEPDC1B-201ENST00000265036 MRNIPQ6NTE8 343 aa7.1□□□□□ -1.27
DEPDC1B-201ENST00000265036 IYDQ6PHW0 289 aa7.1□□□□□ -1.27
DEPDC1B-201ENST00000265036 CILP2Q8IUL8 1156 aa7.1□□□□□ -1.27
DEPDC1B-201ENST00000265036 VRK3Q8IV63 474 aa7.1□□□□□ -1.27
DEPDC1B-201ENST00000265036 GSPT2Q8IYD1 628 aaKnown RBP7.1□□□□□ -1.27
DEPDC1B-201ENST00000265036 RCBTB1Q8NDN9 531 aa7.1□□□□□ -1.27
DEPDC1B-201ENST00000265036 MNS1Q8NEH6 495 aa7.1□□□□□ -1.27
DEPDC1B-201ENST00000265036 OR2L2Q8NH16 312 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms