RNA–Protein interactions for RNA: ENST00000263121.11

SMARCB1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,690 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-201ENST00000263121 HEATR4Q86WZ0 1026 aa22.5■■□□□ 1.19
SMARCB1-201ENST00000263121 SPATS2Q86XZ4 545 aaKnown RBP22.5■■□□□ 1.19
SMARCB1-201ENST00000263121 FBXO39Q8N4B4 442 aa22.5■■□□□ 1.19
SMARCB1-201ENST00000263121 MAFAQ8NHW3 353 aaPredicted RBP22.5■■□□□ 1.19
SMARCB1-201ENST00000263121 ELMO1Q92556 727 aa22.5■■□□□ 1.19
SMARCB1-201ENST00000263121 OR2AG1Q9H205 316 aa22.5■■□□□ 1.19
SMARCB1-201ENST00000263121 MBNL1Q9NR56 388 aaKnown RBP22.5■■□□□ 1.19
SMARCB1-201ENST00000263121 PNPOQ9NVS9 261 aa22.5■■□□□ 1.19
SMARCB1-201ENST00000263121 ATXN10Q9UBB4 475 aa22.5■■□□□ 1.19
SMARCB1-201ENST00000263121 MARCOQ9UEW3 520 aaPredicted RBP22.5■■□□□ 1.19
SMARCB1-201ENST00000263121 CDYLQ9Y232 598 aa22.5■■□□□ 1.19
SMARCB1-201ENST00000263121 RAP2CQ9Y3L5 183 aa22.5■■□□□ 1.19
SMARCB1-201ENST00000263121 VEGFDO43915 354 aa22.49■■□□□ 1.19
SMARCB1-201ENST00000263121 GPC4O75487 556 aa22.49■■□□□ 1.19
SMARCB1-201ENST00000263121 SNUPNO95149 360 aaKnown RBP22.49■■□□□ 1.19
SMARCB1-201ENST00000263121 PAK4O96013 591 aaPredicted RBP22.49■■□□□ 1.19
SMARCB1-201ENST00000263121 KITP10721 976 aa22.49■■□□□ 1.19
SMARCB1-201ENST00000263121 STARD6P59095 220 aa22.49■■□□□ 1.19
SMARCB1-201ENST00000263121 HSPA14Q0VDF9 509 aa22.49■■□□□ 1.19
SMARCB1-201ENST00000263121 BOP1Q14137 746 aaKnown RBP22.49■■□□□ 1.19
SMARCB1-201ENST00000263121 TGFBIQ15582 683 aa22.49■■□□□ 1.19
SMARCB1-201ENST00000263121 FRMD7Q6ZUT3 714 aa22.49■■□□□ 1.19
SMARCB1-201ENST00000263121 ZNF781Q8N8C0 355 aa22.49■■□□□ 1.19
SMARCB1-201ENST00000263121 CCM2Q9BSQ5 444 aa22.49■■□□□ 1.19
SMARCB1-201ENST00000263121 FAM126AQ9BYI3 521 aaPredicted RBP22.49■■□□□ 1.19
SMARCB1-201ENST00000263121 SLC17A9Q9BYT1 436 aa22.49■■□□□ 1.19
SMARCB1-201ENST00000263121 GSTO2Q9H4Y5 243 aa22.49■■□□□ 1.19
SMARCB1-201ENST00000263121 LMAN1LQ9HAT1 526 aa22.49■■□□□ 1.19
SMARCB1-201ENST00000263121 CD93Q9NPY3 652 aa22.49■■□□□ 1.19
SMARCB1-201ENST00000263121 NUDT4Q9NZJ9 180 aa22.49■■□□□ 1.19
SMARCB1-201ENST00000263121 ADAMTS6Q9UKP5 1117 aa22.49■■□□□ 1.19
SMARCB1-201ENST00000263121 MRPS17Q9Y2R5 130 aaKnown RBP22.49■■□□□ 1.19
SMARCB1-201ENST00000263121 USH1CQ9Y6N9 552 aa22.49■■□□□ 1.19
SMARCB1-201ENST00000263121 TBC1D3DA0A087WVF3 549 aa22.49■■□□□ 1.19
SMARCB1-201ENST00000263121 TBC1D3IA0A087WXS9 549 aa22.49■■□□□ 1.19
SMARCB1-201ENST00000263121 TBC1D3EA0A087X179 549 aa22.49■■□□□ 1.19
SMARCB1-201ENST00000263121 TBC1D3KA0A087X1G2 549 aa22.49■■□□□ 1.19
SMARCB1-201ENST00000263121 TBC1D3FA6NER0 549 aaPredicted RBP22.49■■□□□ 1.19
SMARCB1-201ENST00000263121 PRR23AA6NEV1 266 aa22.49■■□□□ 1.19
SMARCB1-201ENST00000263121 TBC1D3LB9A6J9 549 aa22.49■■□□□ 1.19
SMARCB1-201ENST00000263121 STX16-NPEPL1H3BU86 382 aa22.49■■□□□ 1.19
SMARCB1-201ENST00000263121 STX16O14662 325 aa22.49■■□□□ 1.19
SMARCB1-201ENST00000263121 TBC1D3HP0C7X1 549 aa22.49■■□□□ 1.19
SMARCB1-201ENST00000263121 MPC1LP0DKB6 136 aa22.49■■□□□ 1.19
SMARCB1-201ENST00000263121 TPMTP51580 245 aa22.49■■□□□ 1.19
SMARCB1-201ENST00000263121 CDK3Q00526 305 aa22.49■■□□□ 1.19
SMARCB1-201ENST00000263121 SGCGQ13326 291 aa22.49■■□□□ 1.19
SMARCB1-201ENST00000263121 FZD5Q13467 585 aa22.49■■□□□ 1.19
SMARCB1-201ENST00000263121 ZNF658BQ4V348 819 aaPredicted RBP22.49■■□□□ 1.19
SMARCB1-201ENST00000263121 UNC50Q53HI1 259 aa22.49■■□□□ 1.19
SMARCB1-201ENST00000263121 TBC1D3GQ6DHY5 549 aa22.49■■□□□ 1.19
SMARCB1-201ENST00000263121 TBC1D3CQ6IPX1 549 aa22.49■■□□□ 1.19
SMARCB1-201ENST00000263121 SYT13Q7L8C5 426 aa22.49■■□□□ 1.19
SMARCB1-201ENST00000263121 RAB44Q7Z6P3 723 aaPredicted RBP22.49■■□□□ 1.19
SMARCB1-201ENST00000263121 VRK3Q8IV63 474 aa22.49■■□□□ 1.19
SMARCB1-201ENST00000263121 TBC1D3Q8IZP1 549 aaPredicted RBP22.49■■□□□ 1.19
SMARCB1-201ENST00000263121 ASZ1Q8WWH4 475 aa22.49■■□□□ 1.19
SMARCB1-201ENST00000263121 KLK6Q92876 244 aa22.49■■□□□ 1.19
SMARCB1-201ENST00000263121 RMDN2Q96LZ7 410 aa22.49■■□□□ 1.19
SMARCB1-201ENST00000263121 SIKE1Q9BRV8 207 aa22.49■■□□□ 1.19
SMARCB1-201ENST00000263121 TEX101Q9BY14 249 aa22.49■■□□□ 1.19
SMARCB1-201ENST00000263121 ILKAPQ9H0C8 392 aaPredicted RBP22.49■■□□□ 1.19
SMARCB1-201ENST00000263121 POLMQ9NP87 494 aaPredicted RBP22.49■■□□□ 1.19
SMARCB1-201ENST00000263121 LTB4R2Q9NPC1 389 aa22.49■■□□□ 1.19
SMARCB1-201ENST00000263121 KCNK4Q9NYG8 393 aa22.49■■□□□ 1.19
SMARCB1-201ENST00000263121 OARD1Q9Y530 152 aa22.49■■□□□ 1.19
SMARCB1-201ENST00000263121 A0A0G2JND7 137 aa22.48■■□□□ 1.19
SMARCB1-201ENST00000263121 TMEM202A6NGA9 273 aa22.48■■□□□ 1.19
SMARCB1-201ENST00000263121 C19orf67A6NJJ6 358 aa22.48■■□□□ 1.19
SMARCB1-201ENST00000263121 SLCO2B1O94956 709 aa22.48■■□□□ 1.19
SMARCB1-201ENST00000263121 TRIM23P36406 574 aa22.48■■□□□ 1.19
SMARCB1-201ENST00000263121 DGKEP52429 567 aa22.48■■□□□ 1.19
SMARCB1-201ENST00000263121 ALDH18A1P54886 795 aaKnown RBP22.48■■□□□ 1.19
SMARCB1-201ENST00000263121 GALNT1Q10472 559 aaPredicted RBP22.48■■□□□ 1.19
SMARCB1-201ENST00000263121 PRKAA1Q13131 559 aa22.48■■□□□ 1.19
SMARCB1-201ENST00000263121 GTF2H3Q13889 308 aa22.48■■□□□ 1.19
SMARCB1-201ENST00000263121 NEK10Q6ZWH5 1172 aa22.48■■□□□ 1.19
SMARCB1-201ENST00000263121 FRA10AC1Q70Z53 315 aa22.48■■□□□ 1.19
SMARCB1-201ENST00000263121 FAM124AQ86V42 546 aa22.48■■□□□ 1.19
SMARCB1-201ENST00000263121 WDR75Q8IWA0 830 aaKnown RBP22.48■■□□□ 1.19
SMARCB1-201ENST00000263121 ASB12Q8WXK4 309 aa22.48■■□□□ 1.19
SMARCB1-201ENST00000263121 DLG3Q92796 817 aa22.48■■□□□ 1.19
SMARCB1-201ENST00000263121 ZNF514Q96K75 400 aaPredicted RBP22.48■■□□□ 1.19
SMARCB1-201ENST00000263121 TRMOQ9BU70 441 aa22.48■■□□□ 1.19
SMARCB1-201ENST00000263121 C1QTNF3Q9BXJ4 246 aa22.48■■□□□ 1.19
SMARCB1-201ENST00000263121 TMEM120AQ9BXJ8 343 aa22.48■■□□□ 1.19
SMARCB1-201ENST00000263121 EPB41L3Q9Y2J2 1087 aaPredicted RBP22.48■■□□□ 1.19
SMARCB1-201ENST00000263121 SIX3O95343 332 aaPredicted RBP22.47■■□□□ 1.19
SMARCB1-201ENST00000263121 ALOX15P16050 662 aaPredicted RBP22.47■■□□□ 1.19
SMARCB1-201ENST00000263121 ZNF8P17098 575 aaPredicted RBP22.47■■□□□ 1.19
SMARCB1-201ENST00000263121 MPSTP25325 297 aa22.47■■□□□ 1.19
SMARCB1-201ENST00000263121 ARFIP2P53365 341 aa22.47■■□□□ 1.19
SMARCB1-201ENST00000263121 PPP2CBP62714 309 aa22.47■■□□□ 1.19
SMARCB1-201ENST00000263121 PPP2CAP67775 309 aa22.47■■□□□ 1.19
SMARCB1-201ENST00000263121 INPP5AQ14642 412 aa22.47■■□□□ 1.19
SMARCB1-201ENST00000263121 FLCNQ8NFG4 579 aa22.47■■□□□ 1.19
SMARCB1-201ENST00000263121 HMGB4Q8WW32 186 aa22.47■■□□□ 1.19
SMARCB1-201ENST00000263121 SHDQ96IW2 340 aa22.47■■□□□ 1.19
SMARCB1-201ENST00000263121 LINC00615Q96LM1 132 aaPredicted RBP22.47■■□□□ 1.19
SMARCB1-201ENST00000263121 C1QTNF7Q9BXJ2 289 aa22.47■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms