RNA–Protein interactions for RNA: ENST00000261556.10

TMEM260-201, Transcript of transmembrane protein 260, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TMEM260, Length 4,264 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-201ENST00000261556 HS6ST3Q8IZP7 471 aa12.84□□□□□ -0.35
TMEM260-201ENST00000261556 TBC1D19Q8N5T2 526 aa12.84□□□□□ -0.35
TMEM260-201ENST00000261556 PACRGLQ8N7B6 248 aa12.84□□□□□ -0.35
TMEM260-201ENST00000261556 TTLQ8NG68 377 aa12.84□□□□□ -0.35
TMEM260-201ENST00000261556 APBB2Q92870 758 aa12.84□□□□□ -0.35
TMEM260-201ENST00000261556 BTBD2Q9BX70 525 aa12.84□□□□□ -0.35
TMEM260-201ENST00000261556 HDHD5Q9BXW7 423 aa12.84□□□□□ -0.35
TMEM260-201ENST00000261556 YTHDF1Q9BYJ9 559 aaKnown RBP12.84□□□□□ -0.35
TMEM260-201ENST00000261556 TMPRSS11EQ9UL52 423 aa12.84□□□□□ -0.35
TMEM260-201ENST00000261556 USP18Q9UMW8 372 aa12.84□□□□□ -0.35
TMEM260-201ENST00000261556 PCDHB8Q9UN66 801 aa12.84□□□□□ -0.35
TMEM260-201ENST00000261556 ERVH48-1M5A8F1 160 aa12.84□□□□□ -0.35
TMEM260-201ENST00000261556 TGFB1I1O43294 461 aa12.84□□□□□ -0.35
TMEM260-201ENST00000261556 SCO2O43819 266 aa12.84□□□□□ -0.35
TMEM260-201ENST00000261556 RECQL4O94761 1208 aa12.84□□□□□ -0.35
TMEM260-201ENST00000261556 FGF3P11487 239 aaPredicted RBP12.84□□□□□ -0.35
TMEM260-201ENST00000261556 YWHAZP63104 245 aaKnown RBP12.84□□□□□ -0.35
TMEM260-201ENST00000261556 PWP1Q13610 501 aa12.84□□□□□ -0.35
TMEM260-201ENST00000261556 TP53BP2Q13625 1128 aa12.84□□□□□ -0.35
TMEM260-201ENST00000261556 GPAT3Q53EU6 434 aa12.84□□□□□ -0.35
TMEM260-201ENST00000261556 FAM171A1Q5VUB5 890 aa12.84□□□□□ -0.35
TMEM260-201ENST00000261556 PRMT9Q6P2P2 845 aa12.84□□□□□ -0.35
TMEM260-201ENST00000261556 MAP4K3Q8IVH8 894 aa12.84□□□□□ -0.35
TMEM260-201ENST00000261556 KIAA0319LQ8IZA0 1049 aa12.84□□□□□ -0.35
TMEM260-201ENST00000261556 MAGEB10Q96LZ2 347 aaPredicted RBP12.84□□□□□ -0.35
TMEM260-201ENST00000261556 LPIN3Q9BQK8 851 aa12.84□□□□□ -0.35
TMEM260-201ENST00000261556 SMPD4Q9NXE4 827 aa12.84□□□□□ -0.35
TMEM260-201ENST00000261556 ERVK-18Q9QC07 812 aa12.84□□□□□ -0.35
TMEM260-201ENST00000261556 A0A1B0GW55 424 aa12.84□□□□□ -0.35
TMEM260-201ENST00000261556 BHMG1C9JSJ3 638 aaPredicted RBP12.84□□□□□ -0.35
TMEM260-201ENST00000261556 F5H5T6 163 aa12.84□□□□□ -0.35
TMEM260-201ENST00000261556 H7C4K7 107 aa12.84□□□□□ -0.35
TMEM260-201ENST00000261556 ECDO95905 644 aaPredicted RBP12.84□□□□□ -0.35
TMEM260-201ENST00000261556 NTRK1P04629 796 aa12.84□□□□□ -0.35
TMEM260-201ENST00000261556 DHRS4L1P0CG22 281 aa12.84□□□□□ -0.35
TMEM260-201ENST00000261556 DUX4L2P0CJ85 424 aa12.84□□□□□ -0.35
TMEM260-201ENST00000261556 DUX4L3P0CJ86 424 aa12.84□□□□□ -0.35
TMEM260-201ENST00000261556 DUX4L4P0CJ87 422 aa12.84□□□□□ -0.35
TMEM260-201ENST00000261556 DUX4L5P0CJ88 424 aa12.84□□□□□ -0.35
TMEM260-201ENST00000261556 DUX4L6P0CJ89 424 aa12.84□□□□□ -0.35
TMEM260-201ENST00000261556 DUX4L7P0CJ90 424 aa12.84□□□□□ -0.35
TMEM260-201ENST00000261556 AGXTP21549 392 aa12.84□□□□□ -0.35
TMEM260-201ENST00000261556 ELAVL2Q12926 359 aaKnown RBP12.84□□□□□ -0.35
TMEM260-201ENST00000261556 SELPLGQ14242 412 aa12.84□□□□□ -0.35
TMEM260-201ENST00000261556 SETMARQ53H47 684 aaPredicted RBP12.84□□□□□ -0.35
TMEM260-201ENST00000261556 ZRANB3Q5FWF4 1079 aa12.84□□□□□ -0.35
TMEM260-201ENST00000261556 CATSPEREQ5SY80 951 aa12.84□□□□□ -0.35
TMEM260-201ENST00000261556 C6orf141Q5SZD1 244 aa12.84□□□□□ -0.35
TMEM260-201ENST00000261556 FBXL6Q8N531 539 aa12.84□□□□□ -0.35
TMEM260-201ENST00000261556 ST8SIA4Q92187 359 aa12.84□□□□□ -0.35
TMEM260-201ENST00000261556 ART5Q96L15 291 aa12.84□□□□□ -0.35
TMEM260-201ENST00000261556 MMP27Q9H306 513 aa12.84□□□□□ -0.35
TMEM260-201ENST00000261556 GPN2Q9H9Y4 310 aaPredicted RBP12.84□□□□□ -0.35
TMEM260-201ENST00000261556 PRMT8Q9NR22 394 aaPredicted RBP12.84□□□□□ -0.35
TMEM260-201ENST00000261556 GMPR2Q9P2T1 348 aaKnown RBP12.84□□□□□ -0.35
TMEM260-201ENST00000261556 DUX4Q9UBX2 424 aa12.84□□□□□ -0.35
TMEM260-201ENST00000261556 AASSQ9UDR5 926 aa12.84□□□□□ -0.35
TMEM260-201ENST00000261556 PPIEQ9UNP9 301 aaKnown RBP12.84□□□□□ -0.35
TMEM260-201ENST00000261556 PRRC2BQ5JSZ5 2229 aaKnown RBP12.83□□□□□ -0.35
TMEM260-201ENST00000261556 SERPIND1P05546 499 aa12.83□□□□□ -0.36
TMEM260-201ENST00000261556 C2orf80Q0P641 193 aa12.83□□□□□ -0.36
TMEM260-201ENST00000261556 SQLEQ14534 574 aa12.83□□□□□ -0.36
TMEM260-201ENST00000261556 ARHGAP15Q53QZ3 475 aa12.83□□□□□ -0.36
TMEM260-201ENST00000261556 RBM48Q5RL73 367 aaKnown RBP12.83□□□□□ -0.36
TMEM260-201ENST00000261556 ZNF613Q6PF04 617 aa12.83□□□□□ -0.36
TMEM260-201ENST00000261556 FAM71AQ8IYT1 594 aa12.83□□□□□ -0.36
TMEM260-201ENST00000261556 OR10T2Q8NGX3 314 aa12.83□□□□□ -0.36
TMEM260-201ENST00000261556 CD101Q93033 1021 aa12.83□□□□□ -0.36
TMEM260-201ENST00000261556 KREMEN1Q96MU8 473 aa12.83□□□□□ -0.36
TMEM260-201ENST00000261556 VPS28Q9UK41 221 aa12.83□□□□□ -0.36
TMEM260-201ENST00000261556 MGAT4BQ9UQ53 548 aa12.83□□□□□ -0.36
TMEM260-201ENST00000261556 HRH3Q9Y5N1 445 aa12.83□□□□□ -0.36
TMEM260-201ENST00000261556 CHD2O14647 1828 aaKnown RBP12.83□□□□□ -0.36
TMEM260-201ENST00000261556 ZNF254O75437 659 aa12.83□□□□□ -0.36
TMEM260-201ENST00000261556 RFPL1O75677 317 aa12.83□□□□□ -0.36
TMEM260-201ENST00000261556 KCNK2O95069 426 aa12.83□□□□□ -0.36
TMEM260-201ENST00000261556 HAAOP46952 286 aa12.83□□□□□ -0.36
TMEM260-201ENST00000261556 LAPTM5Q13571 262 aa12.83□□□□□ -0.36
TMEM260-201ENST00000261556 CSHL1Q14406 222 aa12.83□□□□□ -0.36
TMEM260-201ENST00000261556 PDK2Q15119 407 aa12.83□□□□□ -0.36
TMEM260-201ENST00000261556 UGT8Q16880 541 aa12.83□□□□□ -0.36
TMEM260-201ENST00000261556 SCUBE3Q8IX30 993 aa12.83□□□□□ -0.36
TMEM260-201ENST00000261556 CIDECQ96AQ7 238 aaPredicted RBP12.83□□□□□ -0.36
TMEM260-201ENST00000261556 CRELD1Q96HD1 420 aa12.83□□□□□ -0.36
TMEM260-201ENST00000261556 SYT17Q9BSW7 474 aa12.83□□□□□ -0.36
TMEM260-201ENST00000261556 PORCNQ9H237 461 aa12.83□□□□□ -0.36
TMEM260-201ENST00000261556 VRTNQ9H8Y1 702 aa12.83□□□□□ -0.36
TMEM260-201ENST00000261556 SNTG1Q9NSN8 517 aa12.83□□□□□ -0.36
TMEM260-201ENST00000261556 TMEM39AQ9NV64 488 aa12.83□□□□□ -0.36
TMEM260-201ENST00000261556 NKIRAS2Q9NYR9 191 aa12.83□□□□□ -0.36
TMEM260-201ENST00000261556 PKP3Q9Y446 797 aa12.83□□□□□ -0.36
TMEM260-201ENST00000261556 ZNF250P15622 560 aa12.83□□□□□ -0.36
TMEM260-201ENST00000261556 PTPN5P54829 565 aa12.83□□□□□ -0.36
TMEM260-201ENST00000261556 GCNT1Q02742 428 aa12.83□□□□□ -0.36
TMEM260-201ENST00000261556 DEFB115Q30KQ5 88 aa12.83□□□□□ -0.36
TMEM260-201ENST00000261556 CELF3Q5SZQ8 465 aaKnown RBP12.83□□□□□ -0.36
TMEM260-201ENST00000261556 EPGNQ6UW88 154 aa12.83□□□□□ -0.36
TMEM260-201ENST00000261556 CMTR2Q8IYT2 770 aaKnown RBP12.83□□□□□ -0.36
TMEM260-201ENST00000261556 SLC30A2Q9BRI3 323 aa12.83□□□□□ -0.36
TMEM260-201ENST00000261556 MBD2Q9UBB5 411 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms