RNA–Protein interactions for RNA: ENST00000259008.6

BRIP1-201, Transcript of BRCA1 interacting protein C-terminal helicase 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene BRIP1, Length 6,048 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRIP1-201ENST00000259008 AVL9Q8NBF6 648 aa6.27□□□□□ -1.41
BRIP1-201ENST00000259008 SPPL3Q8TCT6 385 aa6.27□□□□□ -1.41
BRIP1-201ENST00000259008 PYCR2Q96C36 320 aa6.27□□□□□ -1.41
BRIP1-201ENST00000259008 PPP3R2Q96LZ3 170 aa6.27□□□□□ -1.41
BRIP1-201ENST00000259008 CLSTN3Q9BQT9 956 aa6.27□□□□□ -1.41
BRIP1-201ENST00000259008 TMEM245Q9H330 911 aa6.27□□□□□ -1.41
BRIP1-201ENST00000259008 FBRSL1Q9HCM7 1045 aaKnown RBP6.27□□□□□ -1.41
BRIP1-201ENST00000259008 IGKV6D-21A0A0A0MT36 114 aa6.27□□□□□ -1.41
BRIP1-201ENST00000259008 CCDC162PA2VCL2 907 aa6.27□□□□□ -1.41
BRIP1-201ENST00000259008 MBLAC1A4D2B0 266 aaPredicted RBP6.27□□□□□ -1.41
BRIP1-201ENST00000259008 H3BNC9 293 aa6.27□□□□□ -1.41
BRIP1-201ENST00000259008 TSPAN6O43657 245 aa6.27□□□□□ -1.41
BRIP1-201ENST00000259008 STK16O75716 305 aa6.27□□□□□ -1.41
BRIP1-201ENST00000259008 RECQL5O94762 991 aaPredicted RBP6.27□□□□□ -1.41
BRIP1-201ENST00000259008 LBPP18428 481 aa6.27□□□□□ -1.41
BRIP1-201ENST00000259008 ME2P23368 584 aa6.27□□□□□ -1.41
BRIP1-201ENST00000259008 AFF1P51825 1210 aaKnown RBP6.27□□□□□ -1.41
BRIP1-201ENST00000259008 CLDN2P57739 230 aa6.27□□□□□ -1.41
BRIP1-201ENST00000259008 NRG1Q02297 640 aaPredicted RBP6.27□□□□□ -1.41
BRIP1-201ENST00000259008 FGL2Q14314 439 aa6.27□□□□□ -1.41
BRIP1-201ENST00000259008 TOR1AIP1Q5JTV8 583 aa6.27□□□□□ -1.41
BRIP1-201ENST00000259008 SLC29A4Q7RTT9 530 aa6.27□□□□□ -1.41
BRIP1-201ENST00000259008 CLNKQ7Z7G1 428 aa6.27□□□□□ -1.41
BRIP1-201ENST00000259008 MTDHQ86UE4 582 aaKnown RBP6.27□□□□□ -1.41
BRIP1-201ENST00000259008 LRRTM3Q86VH5 581 aa6.27□□□□□ -1.41
BRIP1-201ENST00000259008 TCEAL8Q8IYN2 117 aa6.27□□□□□ -1.41
BRIP1-201ENST00000259008 VANGL1Q8TAA9 524 aaPredicted RBP6.27□□□□□ -1.41
BRIP1-201ENST00000259008 THAP3Q8WTV1 239 aaPredicted RBP6.27□□□□□ -1.41
BRIP1-201ENST00000259008 ZNF514Q96K75 400 aaPredicted RBP6.27□□□□□ -1.41
BRIP1-201ENST00000259008 FUCA2Q9BTY2 467 aa6.27□□□□□ -1.41
BRIP1-201ENST00000259008 IPPKQ9H8X2 491 aa6.27□□□□□ -1.41
BRIP1-201ENST00000259008 KLRF1Q9NZS2 232 aa6.27□□□□□ -1.41
BRIP1-201ENST00000259008 DMGDHQ9UI17 866 aaKnown RBP6.27□□□□□ -1.41
BRIP1-201ENST00000259008 BRWD3Q6RI45 1802 aa6.27□□□□□ -1.41
BRIP1-201ENST00000259008 OAZ2O95190 189 aa6.27□□□□□ -1.41
BRIP1-201ENST00000259008 KRT75O95678 551 aa6.27□□□□□ -1.41
BRIP1-201ENST00000259008 C8GP07360 202 aa6.27□□□□□ -1.41
BRIP1-201ENST00000259008 TCF4P15884 667 aa6.27□□□□□ -1.41
BRIP1-201ENST00000259008 EFNA1P20827 205 aaPredicted RBP6.27□□□□□ -1.41
BRIP1-201ENST00000259008 SERPINB3P29508 390 aa6.27□□□□□ -1.41
BRIP1-201ENST00000259008 CD6P30203 668 aa6.27□□□□□ -1.41
BRIP1-201ENST00000259008 RYKP34925 604 aa6.27□□□□□ -1.41
BRIP1-201ENST00000259008 SEC24CP53992 1094 aa6.27□□□□□ -1.41
BRIP1-201ENST00000259008 PRKAA2P54646 552 aa6.27□□□□□ -1.41
BRIP1-201ENST00000259008 MSLNQ13421 630 aaPredicted RBP6.27□□□□□ -1.41
BRIP1-201ENST00000259008 ZNF234Q14588 700 aa6.27□□□□□ -1.41
BRIP1-201ENST00000259008 RASA2Q15283 850 aa6.27□□□□□ -1.41
BRIP1-201ENST00000259008 OLFML1Q6UWY5 402 aa6.27□□□□□ -1.41
BRIP1-201ENST00000259008 TMEM110Q86TL2 294 aa6.27□□□□□ -1.41
BRIP1-201ENST00000259008 SRFBP1Q8NEF9 429 aaKnown RBP6.27□□□□□ -1.41
BRIP1-201ENST00000259008 NXNL1Q96CM4 212 aa6.27□□□□□ -1.41
BRIP1-201ENST00000259008 TSSK3Q96PN8 268 aa6.27□□□□□ -1.41
BRIP1-201ENST00000259008 CDADC1Q9BWV3 514 aa6.27□□□□□ -1.41
BRIP1-201ENST00000259008 SH3BGRL2Q9UJC5 107 aa6.27□□□□□ -1.41
BRIP1-201ENST00000259008 LZTS1Q9Y250 596 aa6.27□□□□□ -1.41
BRIP1-201ENST00000259008 TCRBV7S2A1N4TA0A589 114 aa6.27□□□□□ -1.41
BRIP1-201ENST00000259008 ADAM12O43184 909 aa6.27□□□□□ -1.41
BRIP1-201ENST00000259008 PPP1R37O75864 691 aa6.27□□□□□ -1.41
BRIP1-201ENST00000259008 FAM163BP0C2L3 166 aa6.27□□□□□ -1.41
BRIP1-201ENST00000259008 RPL3P39023 403 aaKnown RBP6.27□□□□□ -1.41
BRIP1-201ENST00000259008 PTGER3P43115 390 aa6.27□□□□□ -1.41
BRIP1-201ENST00000259008 RPS15P62841 145 aaKnown RBP6.27□□□□□ -1.41
BRIP1-201ENST00000259008 C1DQ13901 141 aaKnown RBP6.27□□□□□ -1.41
BRIP1-201ENST00000259008 CDKN3Q16667 212 aa6.27□□□□□ -1.41
BRIP1-201ENST00000259008 CPTPQ5TA50 214 aa6.27□□□□□ -1.41
BRIP1-201ENST00000259008 DEPDC1Q5TB30 811 aa6.27□□□□□ -1.41
BRIP1-201ENST00000259008 MACC1Q6ZN28 852 aa6.27□□□□□ -1.41
BRIP1-201ENST00000259008 TMEM26Q6ZUK4 368 aa6.27□□□□□ -1.41
BRIP1-201ENST00000259008 Q6ZVL8 140 aa6.27□□□□□ -1.41
BRIP1-201ENST00000259008 RNF148Q8N7C7 305 aa6.27□□□□□ -1.41
BRIP1-201ENST00000259008 OR10Q1Q8NGQ4 319 aa6.27□□□□□ -1.41
BRIP1-201ENST00000259008 RTP3Q9BQQ7 232 aa6.27□□□□□ -1.41
BRIP1-201ENST00000259008 HAPLN2Q9GZV7 340 aa6.27□□□□□ -1.41
BRIP1-201ENST00000259008 KCNH6Q9H252 994 aa6.27□□□□□ -1.41
BRIP1-201ENST00000259008 TMBIM4Q9HC24 238 aa6.27□□□□□ -1.41
BRIP1-201ENST00000259008 THAP1Q9NVV9 213 aa6.27□□□□□ -1.41
BRIP1-201ENST00000259008 ZSCAN32Q9NX65 697 aa6.27□□□□□ -1.41
BRIP1-201ENST00000259008 ANAPC2Q9UJX6 822 aa6.27□□□□□ -1.41
BRIP1-201ENST00000259008 MAP4K5Q9Y4K4 846 aa6.27□□□□□ -1.41
BRIP1-201ENST00000259008 TIMM22Q9Y584 194 aa6.27□□□□□ -1.41
BRIP1-201ENST00000259008 SNX13Q9Y5W8 968 aa6.27□□□□□ -1.41
BRIP1-201ENST00000259008 MARF1Q9Y4F3 1742 aaKnown RBP6.27□□□□□ -1.41
BRIP1-201ENST00000259008 ANKRD36CQ5JPF3 1778 aa6.27□□□□□ -1.41
BRIP1-201ENST00000259008 SNTNA6NMZ2 147 aa6.26□□□□□ -1.41
BRIP1-201ENST00000259008 FGFR3P22607 806 aa6.26□□□□□ -1.41
BRIP1-201ENST00000259008 IL1R2P27930 398 aa6.26□□□□□ -1.41
BRIP1-201ENST00000259008 RABIFP47224 123 aa6.26□□□□□ -1.41
BRIP1-201ENST00000259008 TAS2R41P59536 307 aa6.26□□□□□ -1.41
BRIP1-201ENST00000259008 CSTF3Q12996 717 aaKnown RBP6.26□□□□□ -1.41
BRIP1-201ENST00000259008 ELAVL3Q14576 367 aaKnown RBP6.26□□□□□ -1.41
BRIP1-201ENST00000259008 PCBP2Q15366 365 aaKnown RBP eCLIP6.26□□□□□ -1.413e-6■■■■■ 27.8
BRIP1-201ENST00000259008 ZCWPW2Q504Y3 356 aa6.26□□□□□ -1.41
BRIP1-201ENST00000259008 ZNF544Q6NX49 715 aa6.26□□□□□ -1.41
BRIP1-201ENST00000259008 PARM1Q6UWI2 310 aa6.26□□□□□ -1.41
BRIP1-201ENST00000259008 C10orf107Q8IVU9 208 aa6.26□□□□□ -1.41
BRIP1-201ENST00000259008 PRELID2Q8N945 189 aa6.26□□□□□ -1.41
BRIP1-201ENST00000259008 TFGQ92734 400 aaPredicted RBP6.26□□□□□ -1.41
BRIP1-201ENST00000259008 NTAN1Q96AB6 310 aa6.26□□□□□ -1.41
BRIP1-201ENST00000259008 CENPTQ96BT3 561 aa6.26□□□□□ -1.41
BRIP1-201ENST00000259008 MMABQ96EY8 250 aaPredicted RBP6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms