RNA–Protein interactions for RNA: ENST00000257290.9

PDGFRA-201, Transcript of platelet derived growth factor receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRA, Length 6,576 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-201ENST00000257290 SAT1P21673 171 aa6.68□□□□□ -1.34
PDGFRA-201ENST00000257290 DDOSTP39656 456 aa6.68□□□□□ -1.34
PDGFRA-201ENST00000257290 GRIA1P42261 906 aa6.68□□□□□ -1.34
PDGFRA-201ENST00000257290 LLGL1Q15334 1064 aa6.68□□□□□ -1.34
PDGFRA-201ENST00000257290 MTX3Q5HYI7 312 aa6.68□□□□□ -1.34
PDGFRA-201ENST00000257290 BSPRYQ5W0U4 402 aa6.68□□□□□ -1.34
PDGFRA-201ENST00000257290 STEAP3Q658P3 488 aa6.68□□□□□ -1.34
PDGFRA-201ENST00000257290 ABLIM2Q6H8Q1 611 aa6.68□□□□□ -1.34
PDGFRA-201ENST00000257290 ANKRD54Q6NXT1 300 aa6.68□□□□□ -1.34
PDGFRA-201ENST00000257290 ZNF782Q6ZMW2 699 aaPredicted RBP6.68□□□□□ -1.34
PDGFRA-201ENST00000257290 SMIM5Q71RC9 77 aa6.68□□□□□ -1.34
PDGFRA-201ENST00000257290 RETREG3Q86VR2 466 aa6.68□□□□□ -1.34
PDGFRA-201ENST00000257290 RASGRP4Q8TDF6 673 aa6.68□□□□□ -1.34
PDGFRA-201ENST00000257290 COA7Q96BR5 231 aa6.68□□□□□ -1.34
PDGFRA-201ENST00000257290 CCDC126Q96EE4 140 aa6.68□□□□□ -1.34
PDGFRA-201ENST00000257290 EEF2KMTQ96G04 330 aa6.68□□□□□ -1.34
PDGFRA-201ENST00000257290 CCDC32Q9BV29 185 aa6.68□□□□□ -1.34
PDGFRA-201ENST00000257290 FICDQ9BVA6 458 aa6.68□□□□□ -1.34
PDGFRA-201ENST00000257290 PRKD2Q9BZL6 878 aa6.68□□□□□ -1.34
PDGFRA-201ENST00000257290 RPF2Q9H7B2 306 aaKnown RBP6.68□□□□□ -1.34
PDGFRA-201ENST00000257290 COQ10BQ9H8M1 238 aa6.68□□□□□ -1.34
PDGFRA-201ENST00000257290 MRPL47Q9HD33 250 aaKnown RBP6.68□□□□□ -1.34
PDGFRA-201ENST00000257290 TRIM36Q9NQ86 728 aa6.68□□□□□ -1.34
PDGFRA-201ENST00000257290 PPIEQ9UNP9 301 aaKnown RBP6.68□□□□□ -1.34
PDGFRA-201ENST00000257290 SALL1Q9NSC2 1324 aa6.68□□□□□ -1.34
PDGFRA-201ENST00000257290 ZNF536O15090 1300 aa6.67□□□□□ -1.34
PDGFRA-201ENST00000257290 ABCB11O95342 1321 aa6.67□□□□□ -1.34
PDGFRA-201ENST00000257290 K7ERQ8 282 aa6.67□□□□□ -1.34
PDGFRA-201ENST00000257290 PITPNM1O00562 1244 aa6.67□□□□□ -1.34
PDGFRA-201ENST00000257290 CYP7B1O75881 506 aa6.67□□□□□ -1.34
PDGFRA-201ENST00000257290 GH2P01242 217 aa6.67□□□□□ -1.34
PDGFRA-201ENST00000257290 TFAP2AP05549 437 aa6.67□□□□□ -1.34
PDGFRA-201ENST00000257290 WEE2P0C1S8 567 aa6.67□□□□□ -1.34
PDGFRA-201ENST00000257290 SDC2P34741 201 aa6.67□□□□□ -1.34
PDGFRA-201ENST00000257290 PSME3P61289 254 aa6.67□□□□□ -1.34
PDGFRA-201ENST00000257290 VAMP2P63027 116 aa6.67□□□□□ -1.34
PDGFRA-201ENST00000257290 ERV3-1Q14264 604 aa6.67□□□□□ -1.34
PDGFRA-201ENST00000257290 LBHQ53QV2 105 aaPredicted RBP6.67□□□□□ -1.34
PDGFRA-201ENST00000257290 ZNF773Q6PK81 442 aa6.67□□□□□ -1.34
PDGFRA-201ENST00000257290 DDX53Q86TM3 631 aaKnown RBP6.67□□□□□ -1.34
PDGFRA-201ENST00000257290 CMTR2Q8IYT2 770 aaKnown RBP6.67□□□□□ -1.34
PDGFRA-201ENST00000257290 EID3Q8N140 333 aa6.67□□□□□ -1.34
PDGFRA-201ENST00000257290 MCUQ8NE86 351 aa6.67□□□□□ -1.34
PDGFRA-201ENST00000257290 PPP1R13LQ8WUF5 828 aa6.67□□□□□ -1.34
PDGFRA-201ENST00000257290 CENPIQ92674 756 aaPredicted RBP6.67□□□□□ -1.34
PDGFRA-201ENST00000257290 SLC47A1Q96FL8 570 aa6.67□□□□□ -1.34
PDGFRA-201ENST00000257290 PPM1MQ96MI6 270 aa6.67□□□□□ -1.34
PDGFRA-201ENST00000257290 DCSTAMPQ9H295 470 aa6.67□□□□□ -1.34
PDGFRA-201ENST00000257290 EML4Q9HC35 981 aaKnown RBP6.67□□□□□ -1.34
PDGFRA-201ENST00000257290 CHST12Q9NRB3 414 aa6.67□□□□□ -1.34
PDGFRA-201ENST00000257290 KCNH4Q9UQ05 1017 aa6.67□□□□□ -1.34
PDGFRA-201ENST00000257290 GSTK1Q9Y2Q3 226 aa6.67□□□□□ -1.34
PDGFRA-201ENST00000257290 TMX2Q9Y320 296 aa6.67□□□□□ -1.34
PDGFRA-201ENST00000257290 TRAF6Q9Y4K3 522 aa6.67□□□□□ -1.34
PDGFRA-201ENST00000257290 RPP14O95059 124 aaKnown RBP6.67□□□□□ -1.34
PDGFRA-201ENST00000257290 CALCAP01258 141 aa6.67□□□□□ -1.34
PDGFRA-201ENST00000257290 ANXA5P08758 320 aa6.67□□□□□ -1.34
PDGFRA-201ENST00000257290 PKMP14618 531 aaKnown RBP6.67□□□□□ -1.34
PDGFRA-201ENST00000257290 HK1P19367 917 aa6.67□□□□□ -1.34
PDGFRA-201ENST00000257290 RACK1P63244 317 aaKnown RBP6.67□□□□□ -1.34
PDGFRA-201ENST00000257290 TEKQ02763 1124 aa6.67□□□□□ -1.34
PDGFRA-201ENST00000257290 PTGR1Q14914 329 aa6.67□□□□□ -1.34
PDGFRA-201ENST00000257290 DPF1Q92782 380 aa6.67□□□□□ -1.34
PDGFRA-201ENST00000257290 SLC38A4Q969I6 547 aa6.67□□□□□ -1.34
PDGFRA-201ENST00000257290 TMEM41AQ96HV5 264 aa6.67□□□□□ -1.34
PDGFRA-201ENST00000257290 PANX3Q96QZ0 392 aa6.67□□□□□ -1.34
PDGFRA-201ENST00000257290 ZNF577Q9BSK1 485 aa6.67□□□□□ -1.34
PDGFRA-201ENST00000257290 NMUR2Q9GZQ4 415 aa6.67□□□□□ -1.34
PDGFRA-201ENST00000257290 SPACA1Q9HBV2 294 aa6.67□□□□□ -1.34
PDGFRA-201ENST00000257290 BARHL2Q9NY43 387 aa6.67□□□□□ -1.34
PDGFRA-201ENST00000257290 MYEF2Q9P2K5 600 aaKnown RBP6.67□□□□□ -1.34
PDGFRA-201ENST00000257290 PDE10AQ9Y233 779 aa6.67□□□□□ -1.34
PDGFRA-201ENST00000257290 AGAP5A6NIR3 686 aa6.67□□□□□ -1.34
PDGFRA-201ENST00000257290 NRP2O60462 931 aa6.67□□□□□ -1.34
PDGFRA-201ENST00000257290 RD3LP0DJH9 198 aa6.67□□□□□ -1.34
PDGFRA-201ENST00000257290 PAICSP22234 425 aaKnown RBP6.67□□□□□ -1.34
PDGFRA-201ENST00000257290 RPS19P39019 145 aaKnown RBP6.67□□□□□ -1.34
PDGFRA-201ENST00000257290 DRG2P55039 364 aaKnown RBP6.67□□□□□ -1.34
PDGFRA-201ENST00000257290 CCNJQ5T5M9 372 aa6.67□□□□□ -1.34
PDGFRA-201ENST00000257290 CDKAL1Q5VV42 579 aa6.67□□□□□ -1.34
PDGFRA-201ENST00000257290 PRAMEF13Q5VWM6 474 aa6.67□□□□□ -1.34
PDGFRA-201ENST00000257290 LIPNQ5VXI9 398 aa6.67□□□□□ -1.34
PDGFRA-201ENST00000257290 ATG9BQ674R7 924 aa6.67□□□□□ -1.34
PDGFRA-201ENST00000257290 EPHX4Q8IUS5 362 aa6.67□□□□□ -1.34
PDGFRA-201ENST00000257290 NAGSQ8N159 534 aa6.67□□□□□ -1.34
PDGFRA-201ENST00000257290 FBXL6Q8N531 539 aa6.67□□□□□ -1.34
PDGFRA-201ENST00000257290 ACBD4Q8NC06 268 aa6.67□□□□□ -1.34
PDGFRA-201ENST00000257290 NAXEQ8NCW5 288 aa6.67□□□□□ -1.34
PDGFRA-201ENST00000257290 OR2L3Q8NG85 312 aa6.67□□□□□ -1.34
PDGFRA-201ENST00000257290 IGDCC4Q8TDY8 1250 aa6.67□□□□□ -1.34
PDGFRA-201ENST00000257290 SYN2Q92777 582 aaPredicted RBP6.67□□□□□ -1.34
PDGFRA-201ENST00000257290 NELL1Q92832 810 aa6.67□□□□□ -1.34
PDGFRA-201ENST00000257290 CPNE4Q96A23 557 aaPredicted RBP6.67□□□□□ -1.34
PDGFRA-201ENST00000257290 C12orf66Q96MD2 445 aa6.67□□□□□ -1.34
PDGFRA-201ENST00000257290 BCL7BQ9BQE9 202 aa6.67□□□□□ -1.34
PDGFRA-201ENST00000257290 PI4K2AQ9BTU6 479 aa6.67□□□□□ -1.34
PDGFRA-201ENST00000257290 ZNF768Q9H5H4 540 aaKnown RBP6.67□□□□□ -1.34
PDGFRA-201ENST00000257290 TUBG2Q9NRH3 451 aa6.67□□□□□ -1.34
PDGFRA-201ENST00000257290 PTTG3PQ9NZH4 202 aa6.67□□□□□ -1.34
PDGFRA-201ENST00000257290 TSR3Q9UJK0 312 aaKnown RBP6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms