RNA–Protein interactions for RNA: ENST00000254816.5

TRIM47-201, Transcript of tripartite motif containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM47, Length 2,266 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-201ENST00000254816 MEI4A8MW99 385 aa18.6■□□□□ 0.57
TRIM47-201ENST00000254816 H0Y858 1186 aa18.6■□□□□ 0.57
TRIM47-201ENST00000254816 K7ESM1 405 aa18.6■□□□□ 0.57
TRIM47-201ENST00000254816 PSMD11O00231 422 aa18.6■□□□□ 0.57
TRIM47-201ENST00000254816 KRT36O76013 467 aa18.6■□□□□ 0.57
TRIM47-201ENST00000254816 EGFP01133 1207 aa18.6■□□□□ 0.57
TRIM47-201ENST00000254816 SERPINA6P08185 405 aa18.6■□□□□ 0.57
TRIM47-201ENST00000254816 MSH3P20585 1137 aa18.6■□□□□ 0.57
TRIM47-201ENST00000254816 DGKAP23743 735 aa18.6■□□□□ 0.57
TRIM47-201ENST00000254816 DRD3P35462 400 aa18.6■□□□□ 0.57
TRIM47-201ENST00000254816 SERPINB5P36952 375 aa18.6■□□□□ 0.57
TRIM47-201ENST00000254816 SATB1Q01826 763 aa18.6■□□□□ 0.57
TRIM47-201ENST00000254816 TGFBIQ15582 683 aa18.6■□□□□ 0.57
TRIM47-201ENST00000254816 SBSNQ6UWP8 590 aa18.6■□□□□ 0.57
TRIM47-201ENST00000254816 MYO1HQ8N1T3 1032 aa18.6■□□□□ 0.57
TRIM47-201ENST00000254816 AADATQ8N5Z0 425 aa18.6■□□□□ 0.57
TRIM47-201ENST00000254816 BTN2A2Q8WVV5 523 aa18.6■□□□□ 0.57
TRIM47-201ENST00000254816 PANX3Q96QZ0 392 aa18.6■□□□□ 0.57
TRIM47-201ENST00000254816 OR52B2Q96RD2 323 aa18.6■□□□□ 0.57
TRIM47-201ENST00000254816 LIMD1Q9UGP4 676 aa18.6■□□□□ 0.57
TRIM47-201ENST00000254816 TRPM6Q9BX84 2022 aa18.6■□□□□ 0.57
TRIM47-201ENST00000254816 CCDC189A1A4V9 331 aa18.6■□□□□ 0.57
TRIM47-201ENST00000254816 RGSL1A5PLK6 1076 aa18.6■□□□□ 0.57
TRIM47-201ENST00000254816 HDAC3O15379 428 aa18.6■□□□□ 0.57
TRIM47-201ENST00000254816 LZTS3O60299 673 aaPredicted RBP18.6■□□□□ 0.57
TRIM47-201ENST00000254816 TNFRSF4P43489 277 aa18.6■□□□□ 0.57
TRIM47-201ENST00000254816 RGS4P49798 205 aa18.6■□□□□ 0.57
TRIM47-201ENST00000254816 PIP5KL1Q5T9C9 394 aa18.6■□□□□ 0.57
TRIM47-201ENST00000254816 KIAA1211LQ6NV74 962 aa18.6■□□□□ 0.57
TRIM47-201ENST00000254816 DDHD1Q8NEL9 900 aa18.6■□□□□ 0.57
TRIM47-201ENST00000254816 CLPTM1LQ96KA5 538 aa18.6■□□□□ 0.57
TRIM47-201ENST00000254816 COLQQ9Y215 455 aaPredicted RBP18.6■□□□□ 0.57
TRIM47-201ENST00000254816 ASB1Q9Y576 335 aa18.6■□□□□ 0.57
TRIM47-201ENST00000254816 SGTAO43765 313 aa18.59■□□□□ 0.57
TRIM47-201ENST00000254816 EPHA3P29320 983 aa18.59■□□□□ 0.57
TRIM47-201ENST00000254816 RCN1Q15293 331 aa18.59■□□□□ 0.57
TRIM47-201ENST00000254816 CST6Q15828 149 aa18.59■□□□□ 0.57
TRIM47-201ENST00000254816 C18orf21Q32NC0 220 aaPredicted RBP18.59■□□□□ 0.57
TRIM47-201ENST00000254816 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP18.59■□□□□ 0.57
TRIM47-201ENST00000254816 CYHR1Q6ZMK1 362 aa18.59■□□□□ 0.57
TRIM47-201ENST00000254816 FRA10AC1Q70Z53 315 aa18.59■□□□□ 0.57
TRIM47-201ENST00000254816 TRIM74Q86UV6 250 aa18.59■□□□□ 0.57
TRIM47-201ENST00000254816 NRSN1Q8IZ57 195 aa18.59■□□□□ 0.57
TRIM47-201ENST00000254816 GLYATL1Q969I3 302 aa18.59■□□□□ 0.57
TRIM47-201ENST00000254816 NUS1Q96E22 293 aa18.59■□□□□ 0.57
TRIM47-201ENST00000254816 HDAC8Q9BY41 377 aa18.59■□□□□ 0.57
TRIM47-201ENST00000254816 RSPH9Q9H1X1 276 aaPredicted RBP18.59■□□□□ 0.57
TRIM47-201ENST00000254816 STN1Q9H668 368 aaKnown RBP18.59■□□□□ 0.57
TRIM47-201ENST00000254816 EML4Q9HC35 981 aaKnown RBP18.59■□□□□ 0.57
TRIM47-201ENST00000254816 FAM8A1Q9UBU6 413 aa18.59■□□□□ 0.57
TRIM47-201ENST00000254816 SERGEFQ9UGK8 458 aa18.59■□□□□ 0.57
TRIM47-201ENST00000254816 FADS3Q9Y5Q0 445 aa18.59■□□□□ 0.57
TRIM47-201ENST00000254816 SOX1O00570 391 aaPredicted RBP18.58■□□□□ 0.57
TRIM47-201ENST00000254816 SYNCRIPO60506 623 aaKnown RBP18.58■□□□□ 0.57
TRIM47-201ENST00000254816 MAGEC1O60732 1142 aa18.58■□□□□ 0.57
TRIM47-201ENST00000254816 SNX2O60749 519 aa18.58■□□□□ 0.57
TRIM47-201ENST00000254816 SKAP2O75563 359 aaPredicted RBP18.58■□□□□ 0.57
TRIM47-201ENST00000254816 SOD1P00441 154 aa18.58■□□□□ 0.57
TRIM47-201ENST00000254816 PTDSS1P48651 473 aaKnown RBP18.58■□□□□ 0.57
TRIM47-201ENST00000254816 ERFP50548 548 aa18.58■□□□□ 0.57
TRIM47-201ENST00000254816 CLNS1AP54105 237 aaKnown RBP18.58■□□□□ 0.57
TRIM47-201ENST00000254816 HSPA14Q0VDF9 509 aa18.58■□□□□ 0.57
TRIM47-201ENST00000254816 CAMK2GQ13555 558 aaPredicted RBP18.58■□□□□ 0.57
TRIM47-201ENST00000254816 BOP1Q14137 746 aaKnown RBP18.58■□□□□ 0.57
TRIM47-201ENST00000254816 TMEM52BQ4KMG9 183 aa18.58■□□□□ 0.57
TRIM47-201ENST00000254816 FAM46CQ5VWP2 391 aa18.58■□□□□ 0.57
TRIM47-201ENST00000254816 CLEC6AQ6EIG7 209 aa18.58■□□□□ 0.57
TRIM47-201ENST00000254816 TRPC4APQ8TEL6 797 aa18.58■□□□□ 0.57
TRIM47-201ENST00000254816 SLC6A17Q9H1V8 727 aa18.58■□□□□ 0.57
TRIM47-201ENST00000254816 DCLRE1BQ9H816 532 aa18.58■□□□□ 0.57
TRIM47-201ENST00000254816 KCNK12Q9HB15 430 aa18.58■□□□□ 0.57
TRIM47-201ENST00000254816 LATS2Q9NRM7 1088 aa18.58■□□□□ 0.57
TRIM47-201ENST00000254816 KCTD5Q9NXV2 234 aa18.58■□□□□ 0.57
TRIM47-201ENST00000254816 PIAS3Q9Y6X2 628 aa18.58■□□□□ 0.57
TRIM47-201ENST00000254816 E9PBE3 544 aa18.58■□□□□ 0.56
TRIM47-201ENST00000254816 KLK8O60259 260 aa18.58■□□□□ 0.56
TRIM47-201ENST00000254816 KLHL41O60662 606 aa18.58■□□□□ 0.56
TRIM47-201ENST00000254816 GUCA1CO95843 209 aa18.58■□□□□ 0.56
TRIM47-201ENST00000254816 AOAHP28039 575 aa18.58■□□□□ 0.56
TRIM47-201ENST00000254816 CCNG1P51959 295 aa18.58■□□□□ 0.56
TRIM47-201ENST00000254816 MXRA7P84157 204 aa18.58■□□□□ 0.56
TRIM47-201ENST00000254816 TAF11Q15544 211 aa18.58■□□□□ 0.56
TRIM47-201ENST00000254816 TMPRSS6Q8IU80 811 aa18.58■□□□□ 0.56
TRIM47-201ENST00000254816 VRK3Q8IV63 474 aa18.58■□□□□ 0.56
TRIM47-201ENST00000254816 DTX3LQ8TDB6 740 aa18.58■□□□□ 0.56
TRIM47-201ENST00000254816 CXorf40AQ8TE69 158 aa18.58■□□□□ 0.56
TRIM47-201ENST00000254816 DLG3Q92796 817 aa18.58■□□□□ 0.56
TRIM47-201ENST00000254816 VPS35Q96QK1 796 aa18.58■□□□□ 0.56
TRIM47-201ENST00000254816 SEMA4BQ9NPR2 832 aaPredicted RBP18.58■□□□□ 0.56
TRIM47-201ENST00000254816 A0A1B0GTL3 188 aa18.57■□□□□ 0.56
TRIM47-201ENST00000254816 CFAP99D6REC4 459 aa18.57■□□□□ 0.56
TRIM47-201ENST00000254816 ASGR2P07307 311 aa18.57■□□□□ 0.56
TRIM47-201ENST00000254816 CTSCP53634 463 aa18.57■□□□□ 0.56
TRIM47-201ENST00000254816 SH3BP2P78314 561 aa18.57■□□□□ 0.56
TRIM47-201ENST00000254816 PHKG1Q16816 387 aa18.57■□□□□ 0.56
TRIM47-201ENST00000254816 PPP1R3AQ16821 1122 aa18.57■□□□□ 0.56
TRIM47-201ENST00000254816 TTLL9Q3SXZ7 439 aa18.57■□□□□ 0.56
TRIM47-201ENST00000254816 TMEM196Q5HYL7 178 aa18.57■□□□□ 0.56
TRIM47-201ENST00000254816 RAET1GQ6H3X3 334 aa18.57■□□□□ 0.56
TRIM47-201ENST00000254816 ADAMTSL2Q86TH1 951 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms