RNA–Protein interactions for RNA: ENST00000250448.2

FOXA1-201, Transcript of forkhead box A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXA1, Length 2,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-201ENST00000250448 PER2O15055 1255 aa16.77■□□□□ 0.28
FOXA1-201ENST00000250448 NOL3O60936 208 aaKnown RBP16.77■□□□□ 0.28
FOXA1-201ENST00000250448 GJB3O75712 270 aa16.77■□□□□ 0.28
FOXA1-201ENST00000250448 INHBBP09529 407 aa16.77■□□□□ 0.28
FOXA1-201ENST00000250448 IDO1P14902 403 aa16.77■□□□□ 0.28
FOXA1-201ENST00000250448 CD86P42081 329 aa16.77■□□□□ 0.28
FOXA1-201ENST00000250448 TNK2Q07912 1038 aa16.77■□□□□ 0.28
FOXA1-201ENST00000250448 SLC10A7Q0GE19 358 aa16.77■□□□□ 0.28
FOXA1-201ENST00000250448 CBX3Q13185 183 aa16.77■□□□□ 0.28
FOXA1-201ENST00000250448 SLC44A4Q53GD3 710 aa16.77■□□□□ 0.28
FOXA1-201ENST00000250448 XKR5Q6UX68 686 aa16.77■□□□□ 0.28
FOXA1-201ENST00000250448 TBC1D21Q8IYX1 336 aa16.77■□□□□ 0.28
FOXA1-201ENST00000250448 UMODL1-AS1Q8N2C9 162 aa16.77■□□□□ 0.28
FOXA1-201ENST00000250448 MAGEE2Q8TD90 523 aaPredicted RBP16.77■□□□□ 0.28
FOXA1-201ENST00000250448 SP7Q8TDD2 431 aaPredicted RBP16.77■□□□□ 0.28
FOXA1-201ENST00000250448 NSUN5Q96P11 429 aaKnown RBP16.77■□□□□ 0.28
FOXA1-201ENST00000250448 KCTD14Q9BQ13 255 aaPredicted RBP16.77■□□□□ 0.28
FOXA1-201ENST00000250448 KLF16Q9BXK1 252 aaPredicted RBP16.77■□□□□ 0.28
FOXA1-201ENST00000250448 YTHDF1Q9BYJ9 559 aaKnown RBP16.77■□□□□ 0.28
FOXA1-201ENST00000250448 NT5MQ9NPB1 228 aa16.77■□□□□ 0.28
FOXA1-201ENST00000250448 CRYL1Q9Y2S2 319 aa16.77■□□□□ 0.28
FOXA1-201ENST00000250448 XIRP2A4UGR9 3374 aa16.77■□□□□ 0.27
FOXA1-201ENST00000250448 LINC00032P0C843 101 aa16.77■□□□□ 0.27
FOXA1-201ENST00000250448 NCK1P16333 377 aa16.77■□□□□ 0.27
FOXA1-201ENST00000250448 SLC11A2P49281 568 aa16.77■□□□□ 0.27
FOXA1-201ENST00000250448 HLCSP50747 726 aa16.77■□□□□ 0.27
FOXA1-201ENST00000250448 C21orf59P57076 290 aa16.77■□□□□ 0.27
FOXA1-201ENST00000250448 POLD3Q15054 466 aaPredicted RBP16.77■□□□□ 0.27
FOXA1-201ENST00000250448 OR4D1Q15615 310 aa16.77■□□□□ 0.27
FOXA1-201ENST00000250448 RABL3Q5HYI8 236 aa16.77■□□□□ 0.27
FOXA1-201ENST00000250448 PTRH1Q86Y79 214 aaKnown RBP16.77■□□□□ 0.27
FOXA1-201ENST00000250448 ZBTB8BQ8NAP8 495 aaPredicted RBP16.77■□□□□ 0.27
FOXA1-201ENST00000250448 PAPD5Q8NDF8 572 aaKnown RBP16.77■□□□□ 0.27
FOXA1-201ENST00000250448 PLEKHA8Q96JA3 519 aa16.77■□□□□ 0.27
FOXA1-201ENST00000250448 CDK5RAP1Q96SZ6 601 aaKnown RBP16.77■□□□□ 0.27
FOXA1-201ENST00000250448 CPQQ9Y646 472 aa16.77■□□□□ 0.27
FOXA1-201ENST00000250448 KANSL1LA0AUZ9 987 aa16.76■□□□□ 0.27
FOXA1-201ENST00000250448 DRGXA6NNA5 263 aa16.76■□□□□ 0.27
FOXA1-201ENST00000250448 RAMP2O60895 175 aa16.76■□□□□ 0.27
FOXA1-201ENST00000250448 SNAP29O95721 258 aa16.76■□□□□ 0.27
FOXA1-201ENST00000250448 LDLRP01130 860 aa16.76■□□□□ 0.27
FOXA1-201ENST00000250448 CA3P07451 260 aa16.76■□□□□ 0.27
FOXA1-201ENST00000250448 UGT1A1P22309 533 aa16.76■□□□□ 0.27
FOXA1-201ENST00000250448 UGT1A4P22310 534 aa16.76■□□□□ 0.27
FOXA1-201ENST00000250448 UGT1A3P35503 534 aa16.76■□□□□ 0.27
FOXA1-201ENST00000250448 UGT1A5P35504 534 aa16.76■□□□□ 0.27
FOXA1-201ENST00000250448 YAP1P46937 504 aaKnown RBP16.76■□□□□ 0.27
FOXA1-201ENST00000250448 KPNA1P52294 538 aaPredicted RBP16.76■□□□□ 0.27
FOXA1-201ENST00000250448 LIPEQ05469 1076 aa16.76■□□□□ 0.27
FOXA1-201ENST00000250448 ITKQ08881 620 aa16.76■□□□□ 0.27
FOXA1-201ENST00000250448 CAMK1Q14012 370 aa16.76■□□□□ 0.27
FOXA1-201ENST00000250448 PFKFB4Q16877 469 aa16.76■□□□□ 0.27
FOXA1-201ENST00000250448 CCNYL2Q5T2Q4 361 aa16.76■□□□□ 0.27
FOXA1-201ENST00000250448 MRPL43Q8N983 215 aaKnown RBP16.76■□□□□ 0.27
FOXA1-201ENST00000250448 OR7D4Q8NG98 312 aa16.76■□□□□ 0.27
FOXA1-201ENST00000250448 DNAJB14Q8TBM8 379 aa16.76■□□□□ 0.27
FOXA1-201ENST00000250448 CEP295NLQ96MC4 621 aa16.76■□□□□ 0.27
FOXA1-201ENST00000250448 SLC30A3Q99726 388 aa16.76■□□□□ 0.27
FOXA1-201ENST00000250448 IFT80Q9P2H3 777 aaPredicted RBP16.76■□□□□ 0.27
FOXA1-201ENST00000250448 OAS3Q9Y6K5 1087 aaKnown RBP16.76■□□□□ 0.27
FOXA1-201ENST00000250448 MROH6A6NGR9 719 aa16.76■□□□□ 0.27
FOXA1-201ENST00000250448 WASH4PA8MWX3 477 aa16.76■□□□□ 0.27
FOXA1-201ENST00000250448 GLUD1P00367 558 aa16.76■□□□□ 0.27
FOXA1-201ENST00000250448 ZNF12P17014 697 aa16.76■□□□□ 0.27
FOXA1-201ENST00000250448 ADARB1P78563 741 aaKnown RBP16.76■□□□□ 0.27
FOXA1-201ENST00000250448 BNIP3Q12983 259 aa16.76■□□□□ 0.27
FOXA1-201ENST00000250448 ANKRD26P1Q6NSI1 321 aa16.76■□□□□ 0.27
FOXA1-201ENST00000250448 RBM23Q86U06 439 aaKnown RBP16.76■□□□□ 0.27
FOXA1-201ENST00000250448 OSCP1Q8WVF1 389 aa16.76■□□□□ 0.27
FOXA1-201ENST00000250448 RPL10LQ96L21 214 aaKnown RBP16.76■□□□□ 0.27
FOXA1-201ENST00000250448 TUBA1CQ9BQE3 449 aa16.76■□□□□ 0.27
FOXA1-201ENST00000250448 SP110Q9HB58 689 aa16.76■□□□□ 0.27
FOXA1-201ENST00000250448 TLR9Q9NR96 1032 aa16.76■□□□□ 0.27
FOXA1-201ENST00000250448 GPR45Q9Y5Y3 372 aa16.76■□□□□ 0.27
FOXA1-201ENST00000250448 A0A1W2PP18 115 aa16.75■□□□□ 0.27
FOXA1-201ENST00000250448 SUPT3HO75486 399 aa16.75■□□□□ 0.27
FOXA1-201ENST00000250448 CPNE6O95741 557 aa16.75■□□□□ 0.27
FOXA1-201ENST00000250448 PEX11BO96011 259 aa16.75■□□□□ 0.27
FOXA1-201ENST00000250448 CKMP06732 381 aa16.75■□□□□ 0.27
FOXA1-201ENST00000250448 UMPSP11172 480 aa16.75■□□□□ 0.27
FOXA1-201ENST00000250448 CCR2P41597 374 aa16.75■□□□□ 0.27
FOXA1-201ENST00000250448 GRSF1Q12849 480 aaKnown RBP eCLIP16.75■□□□□ 0.27
FOXA1-201ENST00000250448 ZNF549Q6P9A3 640 aa16.75■□□□□ 0.27
FOXA1-201ENST00000250448 CHST15Q7LFX5 561 aaPredicted RBP16.75■□□□□ 0.27
FOXA1-201ENST00000250448 LRRC49Q8IUZ0 686 aa16.75■□□□□ 0.27
FOXA1-201ENST00000250448 DDHD1Q8NEL9 900 aa16.75■□□□□ 0.27
FOXA1-201ENST00000250448 PNPT1Q8TCS8 783 aaKnown RBP16.75■□□□□ 0.27
FOXA1-201ENST00000250448 ADAMTS19Q8TE59 1207 aa16.75■□□□□ 0.27
FOXA1-201ENST00000250448 TSPEARQ8WU66 669 aa16.75■□□□□ 0.27
FOXA1-201ENST00000250448 TANKQ92844 425 aa16.75■□□□□ 0.27
FOXA1-201ENST00000250448 CNDP2Q96KP4 475 aaKnown RBP16.75■□□□□ 0.27
FOXA1-201ENST00000250448 ZNF639Q9UID6 485 aa16.75■□□□□ 0.27
FOXA1-201ENST00000250448 ASPDHA6ND91 283 aa16.75■□□□□ 0.27
FOXA1-201ENST00000250448 H3BMM5 538 aa16.75■□□□□ 0.27
FOXA1-201ENST00000250448 VPS4BO75351 444 aa16.75■□□□□ 0.27
FOXA1-201ENST00000250448 ZBTB11O95625 1053 aaPredicted RBP16.75■□□□□ 0.27
FOXA1-201ENST00000250448 MT-ND1P03886 318 aa16.75■□□□□ 0.27
FOXA1-201ENST00000250448 MTHFD2P13995 350 aa16.75■□□□□ 0.27
FOXA1-201ENST00000250448 EPCAMP16422 314 aa16.75■□□□□ 0.27
FOXA1-201ENST00000250448 DIO3P55073 304 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms