RNA–Protein interactions for RNA: ENST00000248121.6

SYNGR3-201, Transcript of synaptogyrin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNGR3, Length 2,051 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-201ENST00000248121 CACUL1Q86Y37 369 aa23.01■■□□□ 1.27
SYNGR3-201ENST00000248121 HMGCLL1Q8TB92 370 aa23.01■■□□□ 1.27
SYNGR3-201ENST00000248121 RTKNQ9BST9 563 aa23.01■■□□□ 1.27
SYNGR3-201ENST00000248121 RNPEPL1Q9HAU8 725 aa23.01■■□□□ 1.27
SYNGR3-201ENST00000248121 ZNF225Q9UK10 706 aa23.01■■□□□ 1.27
SYNGR3-201ENST00000248121 PTGDR2Q9Y5Y4 395 aa23.01■■□□□ 1.27
SYNGR3-201ENST00000248121 K7EQS6 105 aa23■■□□□ 1.27
SYNGR3-201ENST00000248121 AZIN1O14977 448 aa23■■□□□ 1.27
SYNGR3-201ENST00000248121 EPHX1P07099 455 aa23■■□□□ 1.27
SYNGR3-201ENST00000248121 RALGDSQ12967 914 aa23■■□□□ 1.27
SYNGR3-201ENST00000248121 LARP4Q71RC2 724 aaKnown RBP eCLIP23■■□□□ 1.27
SYNGR3-201ENST00000248121 KIRREL3Q8IZU9 778 aa23■■□□□ 1.27
SYNGR3-201ENST00000248121 PIP4K2CQ8TBX8 421 aa23■■□□□ 1.27
SYNGR3-201ENST00000248121 TUBB1Q9H4B7 451 aa23■■□□□ 1.27
SYNGR3-201ENST00000248121 ZDHHC3Q9NYG2 299 aa23■■□□□ 1.27
SYNGR3-201ENST00000248121 MBD1Q9UIS9 605 aaPredicted RBP23■■□□□ 1.27
SYNGR3-201ENST00000248121 ATP6AP2A0A1C7CYW4 349 aa22.99■■□□□ 1.27
SYNGR3-201ENST00000248121 ATP6AP2O75787 350 aa22.99■■□□□ 1.27
SYNGR3-201ENST00000248121 THRAP10827 490 aa22.99■■□□□ 1.27
SYNGR3-201ENST00000248121 PRDX3P30048 256 aaKnown RBP22.99■■□□□ 1.27
SYNGR3-201ENST00000248121 HSD11B1LQ7Z5J1 315 aa22.99■■□□□ 1.27
SYNGR3-201ENST00000248121 RP9Q8TA86 221 aaKnown RBP22.99■■□□□ 1.27
SYNGR3-201ENST00000248121 CSGALNACT1Q8TDX6 532 aa22.99■■□□□ 1.27
SYNGR3-201ENST00000248121 C19orf60Q96EN9 201 aa22.99■■□□□ 1.27
SYNGR3-201ENST00000248121 KCNK12Q9HB15 430 aa22.99■■□□□ 1.27
SYNGR3-201ENST00000248121 PRSS16Q9NQE7 514 aa22.99■■□□□ 1.27
SYNGR3-201ENST00000248121 HEBP1Q9NRV9 189 aa22.99■■□□□ 1.27
SYNGR3-201ENST00000248121 CD274Q9NZQ7 290 aa22.99■■□□□ 1.27
SYNGR3-201ENST00000248121 PPM1HQ9ULR3 514 aa22.99■■□□□ 1.27
SYNGR3-201ENST00000248121 TRIOO75962 3097 aa22.99■■□□□ 1.27
SYNGR3-201ENST00000248121 IGLV3-16A0A075B6K0 115 aa22.99■■□□□ 1.27
SYNGR3-201ENST00000248121 E2F3O00716 465 aa22.99■■□□□ 1.27
SYNGR3-201ENST00000248121 NSG1P42857 185 aa22.99■■□□□ 1.27
SYNGR3-201ENST00000248121 E2F5Q15329 346 aa22.99■■□□□ 1.27
SYNGR3-201ENST00000248121 UCMAQ8WVF2 138 aa22.99■■□□□ 1.27
SYNGR3-201ENST00000248121 P2RY13Q9BPV8 354 aa22.99■■□□□ 1.27
SYNGR3-201ENST00000248121 EIF2B4Q9UI10 523 aaKnown RBP22.99■■□□□ 1.27
SYNGR3-201ENST00000248121 VIPR1P32241 457 aa22.98■■□□□ 1.27
SYNGR3-201ENST00000248121 CTHP32929 405 aa22.98■■□□□ 1.27
SYNGR3-201ENST00000248121 SMAD4Q13485 552 aaKnown RBP22.98■■□□□ 1.27
SYNGR3-201ENST00000248121 ELAVL3Q14576 367 aaKnown RBP22.98■■□□□ 1.27
SYNGR3-201ENST00000248121 C18orf21Q32NC0 220 aaPredicted RBP22.98■■□□□ 1.27
SYNGR3-201ENST00000248121 MMAAQ8IVH4 418 aaKnown RBP22.98■■□□□ 1.27
SYNGR3-201ENST00000248121 ZBTB2Q8N680 514 aa22.98■■□□□ 1.27
SYNGR3-201ENST00000248121 ENDOVQ8N8Q3 282 aaKnown RBP22.98■■□□□ 1.27
SYNGR3-201ENST00000248121 TWIST2Q8WVJ9 160 aa22.98■■□□□ 1.27
SYNGR3-201ENST00000248121 OR8D1Q8WZ84 308 aa22.98■■□□□ 1.27
SYNGR3-201ENST00000248121 COPS8Q99627 209 aa22.98■■□□□ 1.27
SYNGR3-201ENST00000248121 NUDT4Q9NZJ9 180 aa22.98■■□□□ 1.27
SYNGR3-201ENST00000248121 ADAMTS6Q9UKP5 1117 aa22.98■■□□□ 1.27
SYNGR3-201ENST00000248121 STON1Q9Y6Q2 735 aa22.98■■□□□ 1.27
SYNGR3-201ENST00000248121 SNX2O60749 519 aa22.97■■□□□ 1.27
SYNGR3-201ENST00000248121 TIE1P35590 1138 aa22.97■■□□□ 1.27
SYNGR3-201ENST00000248121 KIR2DL1P43626 348 aaPredicted RBP22.97■■□□□ 1.27
SYNGR3-201ENST00000248121 CYLC2Q14093 348 aaPredicted RBP22.97■■□□□ 1.27
SYNGR3-201ENST00000248121 ARHGEF7Q14155 803 aa22.97■■□□□ 1.27
SYNGR3-201ENST00000248121 HERC3Q15034 1050 aa22.97■■□□□ 1.27
SYNGR3-201ENST00000248121 ZDHHC20Q5W0Z9 365 aa22.97■■□□□ 1.27
SYNGR3-201ENST00000248121 PGM2L1Q6PCE3 622 aa22.97■■□□□ 1.27
SYNGR3-201ENST00000248121 ADAMTSL2Q86TH1 951 aa22.97■■□□□ 1.27
SYNGR3-201ENST00000248121 SYVN1Q86TM6 617 aa22.97■■□□□ 1.27
SYNGR3-201ENST00000248121 DEFB107AQ8IZN7 70 aa22.97■■□□□ 1.27
SYNGR3-201ENST00000248121 ZNF513Q8N8E2 541 aaPredicted RBP22.97■■□□□ 1.27
SYNGR3-201ENST00000248121 SCAMP4Q969E2 229 aa22.97■■□□□ 1.27
SYNGR3-201ENST00000248121 PANX3Q96QZ0 392 aa22.97■■□□□ 1.27
SYNGR3-201ENST00000248121 CDX2Q99626 313 aaPredicted RBP22.97■■□□□ 1.27
SYNGR3-201ENST00000248121 LATS2Q9NRM7 1088 aa22.97■■□□□ 1.27
SYNGR3-201ENST00000248121 DKK3Q9UBP4 350 aa22.97■■□□□ 1.27
SYNGR3-201ENST00000248121 TMCO1Q9UM00 188 aa22.97■■□□□ 1.27
SYNGR3-201ENST00000248121 PIP5K1BO14986 540 aa22.97■■□□□ 1.27
SYNGR3-201ENST00000248121 UBDO15205 165 aa22.97■■□□□ 1.27
SYNGR3-201ENST00000248121 NARSO43776 548 aaKnown RBP22.97■■□□□ 1.27
SYNGR3-201ENST00000248121 ZNF30P17039 623 aa22.97■■□□□ 1.27
SYNGR3-201ENST00000248121 SLC44A3Q8N4M1 653 aa22.97■■□□□ 1.27
SYNGR3-201ENST00000248121 DLG3Q92796 817 aa22.97■■□□□ 1.27
SYNGR3-201ENST00000248121 LRIG1Q96JA1 1093 aa22.97■■□□□ 1.27
SYNGR3-201ENST00000248121 SPATS2LQ9NUQ6 558 aaKnown RBP22.97■■□□□ 1.27
SYNGR3-201ENST00000248121 SORBS2O94875 1100 aaKnown RBP22.96■■□□□ 1.27
SYNGR3-201ENST00000248121 PRNPP04156 253 aa22.96■■□□□ 1.27
SYNGR3-201ENST00000248121 CYP2A6P11509 494 aaPredicted RBP22.96■■□□□ 1.27
SYNGR3-201ENST00000248121 DGKAP23743 735 aa22.96■■□□□ 1.27
SYNGR3-201ENST00000248121 MMP12P39900 470 aa22.96■■□□□ 1.27
SYNGR3-201ENST00000248121 PON2Q15165 354 aa22.96■■□□□ 1.27
SYNGR3-201ENST00000248121 Q6ZVL8 140 aa22.96■■□□□ 1.27
SYNGR3-201ENST00000248121 PHYKPLQ8IUZ5 450 aa22.96■■□□□ 1.27
SYNGR3-201ENST00000248121 CHPFQ8IZ52 775 aa22.96■■□□□ 1.27
SYNGR3-201ENST00000248121 AKTIPQ9H8T0 292 aa22.96■■□□□ 1.27
SYNGR3-201ENST00000248121 PKD2L2Q9NZM6 624 aa22.96■■□□□ 1.27
SYNGR3-201ENST00000248121 H0Y3Z8 333 aa22.96■■□□□ 1.27
SYNGR3-201ENST00000248121 AIM2O14862 343 aa22.96■■□□□ 1.27
SYNGR3-201ENST00000248121 EGFP01133 1207 aa22.96■■□□□ 1.27
SYNGR3-201ENST00000248121 ETV3P41162 512 aa22.96■■□□□ 1.27
SYNGR3-201ENST00000248121 PSMD8P48556 350 aa22.96■■□□□ 1.27
SYNGR3-201ENST00000248121 RGS4P49798 205 aa22.96■■□□□ 1.27
SYNGR3-201ENST00000248121 NET1Q7Z628 596 aaPredicted RBP22.96■■□□□ 1.27
SYNGR3-201ENST00000248121 MYO1HQ8N1T3 1032 aa22.96■■□□□ 1.27
SYNGR3-201ENST00000248121 RCN3Q96D15 328 aa22.96■■□□□ 1.27
SYNGR3-201ENST00000248121 HGH1Q9BTY7 390 aa22.96■■□□□ 1.27
SYNGR3-201ENST00000248121 GIMAP2Q9UG22 337 aa22.96■■□□□ 1.27
SYNGR3-201ENST00000248121 FFAR2O15552 330 aa22.95■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms