RNA–Protein interactions for RNA: ENST00000242776.8

DDX39A-201, Transcript of DExD-box helicase 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39A, Length 1,471 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-201ENST00000242776 PIRTP0C851 137 aa13.53□□□□□ -0.24
DDX39A-201ENST00000242776 ATXN8OSP0DMR3 200 aa13.53□□□□□ -0.24
DDX39A-201ENST00000242776 TCP1P17987 556 aaKnown RBP13.53□□□□□ -0.24
DDX39A-201ENST00000242776 XRCC1P18887 633 aaPredicted RBP13.53□□□□□ -0.24
DDX39A-201ENST00000242776 MARCKSL1P49006 195 aa13.53□□□□□ -0.24
DDX39A-201ENST00000242776 NIPAL4Q0D2K0 466 aa13.53□□□□□ -0.24
DDX39A-201ENST00000242776 GALNT3Q14435 633 aa13.53□□□□□ -0.24
DDX39A-201ENST00000242776 CHRNA6Q15825 494 aa13.53□□□□□ -0.24
DDX39A-201ENST00000242776 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.53□□□□□ -0.24
DDX39A-201ENST00000242776 ATP13A4Q4VNC1 1196 aa13.53□□□□□ -0.24
DDX39A-201ENST00000242776 ADGRG6Q86SQ4 1221 aa13.53□□□□□ -0.24
DDX39A-201ENST00000242776 Q8NA96 180 aa13.53□□□□□ -0.24
DDX39A-201ENST00000242776 FAM71BQ8TC56 605 aa13.53□□□□□ -0.24
DDX39A-201ENST00000242776 KLHL6Q8WZ60 621 aa13.53□□□□□ -0.24
DDX39A-201ENST00000242776 CXorf40BQ96DE9 158 aa13.53□□□□□ -0.24
DDX39A-201ENST00000242776 ZDHHC12Q96GR4 267 aa13.53□□□□□ -0.24
DDX39A-201ENST00000242776 MAK16Q9BXY0 300 aaKnown RBP13.53□□□□□ -0.24
DDX39A-201ENST00000242776 RBM22Q9NW64 420 aaKnown RBP eCLIP13.53□□□□□ -0.242e-6■□□□□ 10.6
DDX39A-201ENST00000242776 SPTBP11277 2137 aa13.53□□□□□ -0.24
DDX39A-201ENST00000242776 LRBAP50851 2863 aa13.52□□□□□ -0.24
DDX39A-201ENST00000242776 MDC1Q14676 2089 aaKnown RBP13.52□□□□□ -0.24
DDX39A-201ENST00000242776 F5H423 210 aaPredicted RBP13.52□□□□□ -0.25
DDX39A-201ENST00000242776 CES2O00748 559 aa13.52□□□□□ -0.25
DDX39A-201ENST00000242776 MFSD11O43934 449 aa13.52□□□□□ -0.25
DDX39A-201ENST00000242776 BRAFP15056 766 aa13.52□□□□□ -0.25
DDX39A-201ENST00000242776 ZNF7P17097 686 aaPredicted RBP13.52□□□□□ -0.25
DDX39A-201ENST00000242776 NELFEP18615 380 aaKnown RBP13.52□□□□□ -0.25
DDX39A-201ENST00000242776 CAPZBP47756 277 aa13.52□□□□□ -0.25
DDX39A-201ENST00000242776 ARL4DP49703 201 aa13.52□□□□□ -0.25
DDX39A-201ENST00000242776 ARSEP51690 589 aa13.52□□□□□ -0.25
DDX39A-201ENST00000242776 DPYSL3Q14195 570 aa13.52□□□□□ -0.25
DDX39A-201ENST00000242776 PPP2R5EQ16537 467 aa13.52□□□□□ -0.25
DDX39A-201ENST00000242776 QPCTQ16769 361 aa13.52□□□□□ -0.25
DDX39A-201ENST00000242776 ANKRD20A8PQ5CZ79 823 aa13.52□□□□□ -0.25
DDX39A-201ENST00000242776 TFDP3Q5H9I0 405 aa13.52□□□□□ -0.25
DDX39A-201ENST00000242776 SPOCD1Q6ZMY3 1216 aa13.52□□□□□ -0.25
DDX39A-201ENST00000242776 PRSS42Q7Z5A4 293 aa13.52□□□□□ -0.25
DDX39A-201ENST00000242776 TEX26Q8N6G2 289 aa13.52□□□□□ -0.25
DDX39A-201ENST00000242776 AVL9Q8NBF6 648 aa13.52□□□□□ -0.25
DDX39A-201ENST00000242776 FDCSPQ8NFU4 85 aa13.52□□□□□ -0.25
DDX39A-201ENST00000242776 CCHCR1Q8TD31 782 aa13.52□□□□□ -0.25
DDX39A-201ENST00000242776 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.52□□□□□ -0.25
DDX39A-201ENST00000242776 THAP4Q8WY91 577 aa13.52□□□□□ -0.25
DDX39A-201ENST00000242776 RAPGEF5Q92565 580 aa13.52□□□□□ -0.25
DDX39A-201ENST00000242776 ALG3Q92685 438 aa13.52□□□□□ -0.25
DDX39A-201ENST00000242776 RNF25Q96BH1 459 aaPredicted RBP13.52□□□□□ -0.25
DDX39A-201ENST00000242776 PBKQ96KB5 322 aa13.52□□□□□ -0.25
DDX39A-201ENST00000242776 SLC29A3Q9BZD2 475 aa13.52□□□□□ -0.25
DDX39A-201ENST00000242776 SNX12Q9UMY4 172 aa13.52□□□□□ -0.25
DDX39A-201ENST00000242776 SHOC2Q9UQ13 582 aa13.52□□□□□ -0.25
DDX39A-201ENST00000242776 FARSAQ9Y285 508 aaKnown RBP13.52□□□□□ -0.25
DDX39A-201ENST00000242776 ZNF451Q9Y4E5 1061 aa13.52□□□□□ -0.25
DDX39A-201ENST00000242776 PIKFYVEQ9Y2I7 2098 aa13.51□□□□□ -0.25
DDX39A-201ENST00000242776 TOX3O15405 576 aaPredicted RBP13.51□□□□□ -0.25
DDX39A-201ENST00000242776 HLA-DQB2P05538 268 aa13.51□□□□□ -0.25
DDX39A-201ENST00000242776 CD48P09326 243 aa13.51□□□□□ -0.25
DDX39A-201ENST00000242776 TNFRSF8P28908 595 aa13.51□□□□□ -0.25
DDX39A-201ENST00000242776 PTPN7P35236 360 aa13.51□□□□□ -0.25
DDX39A-201ENST00000242776 SERPINB6P35237 376 aa13.51□□□□□ -0.25
DDX39A-201ENST00000242776 PDE1BQ01064 536 aa13.51□□□□□ -0.25
DDX39A-201ENST00000242776 PAPD7Q5XG87 772 aaKnown RBP13.51□□□□□ -0.25
DDX39A-201ENST00000242776 SLC6A19Q695T7 634 aa13.51□□□□□ -0.25
DDX39A-201ENST00000242776 MFSD7Q6UXD7 560 aa13.51□□□□□ -0.25
DDX39A-201ENST00000242776 SYVN1Q86TM6 617 aa13.51□□□□□ -0.25
DDX39A-201ENST00000242776 LRRTM4Q86VH4 590 aa13.51□□□□□ -0.25
DDX39A-201ENST00000242776 RFX6Q8HWS3 928 aa13.51□□□□□ -0.25
DDX39A-201ENST00000242776 OSBPL9Q96SU4 736 aa13.51□□□□□ -0.25
DDX39A-201ENST00000242776 NUDT9Q9BW91 350 aa13.51□□□□□ -0.25
DDX39A-201ENST00000242776 UCK1Q9HA47 277 aa13.51□□□□□ -0.25
DDX39A-201ENST00000242776 TRIM39Q9HCM9 518 aa13.51□□□□□ -0.25
DDX39A-201ENST00000242776 DNPEPQ9ULA0 475 aa13.51□□□□□ -0.25
DDX39A-201ENST00000242776 PCDHGA9Q9Y5G4 932 aaKnown RBP13.51□□□□□ -0.25
DDX39A-201ENST00000242776 SAR1BQ9Y6B6 198 aa13.51□□□□□ -0.25
DDX39A-201ENST00000242776 CCDC88CQ9P219 2028 aa13.5□□□□□ -0.25
DDX39A-201ENST00000242776 DPM1O60762 260 aa13.5□□□□□ -0.25
DDX39A-201ENST00000242776 LDLRP01130 860 aa13.5□□□□□ -0.25
DDX39A-201ENST00000242776 ZFXP17010 805 aaPredicted RBP13.5□□□□□ -0.25
DDX39A-201ENST00000242776 CD86P42081 329 aa13.5□□□□□ -0.25
DDX39A-201ENST00000242776 TFDP2Q14188 446 aa13.5□□□□□ -0.25
DDX39A-201ENST00000242776 GPR19Q15760 415 aa13.5□□□□□ -0.25
DDX39A-201ENST00000242776 KYNUQ16719 465 aa13.5□□□□□ -0.25
DDX39A-201ENST00000242776 PRAMEF17Q5VTA0 474 aa13.5□□□□□ -0.25
DDX39A-201ENST00000242776 LCN10Q6JVE6 187 aa13.5□□□□□ -0.25
DDX39A-201ENST00000242776 FBXO38Q6PIJ6 1188 aa13.5□□□□□ -0.25
DDX39A-201ENST00000242776 TMEM126BQ8IUX1 230 aa13.5□□□□□ -0.25
DDX39A-201ENST00000242776 CISD2Q8N5K1 135 aaKnown RBP13.5□□□□□ -0.25
DDX39A-201ENST00000242776 RBMXL3Q8N7X1 1067 aaKnown RBP13.5□□□□□ -0.25
DDX39A-201ENST00000242776 GPR26Q8NDV2 337 aa13.5□□□□□ -0.25
DDX39A-201ENST00000242776 GPR150Q8NGU9 434 aa13.5□□□□□ -0.25
DDX39A-201ENST00000242776 KIF18AQ8NI77 898 aa13.5□□□□□ -0.25
DDX39A-201ENST00000242776 ARRDC2Q8TBH0 407 aa13.5□□□□□ -0.25
DDX39A-201ENST00000242776 ZNF592Q92610 1267 aa13.5□□□□□ -0.25
DDX39A-201ENST00000242776 FAF2Q96CS3 445 aa13.5□□□□□ -0.25
DDX39A-201ENST00000242776 PHF12Q96QT6 1004 aa13.5□□□□□ -0.25
DDX39A-201ENST00000242776 MAP3K3Q99759 626 aa13.5□□□□□ -0.25
DDX39A-201ENST00000242776 GPR87Q9BY21 358 aa13.5□□□□□ -0.25
DDX39A-201ENST00000242776 CHST8Q9H2A9 424 aa13.5□□□□□ -0.25
DDX39A-201ENST00000242776 SLC40A1Q9NP59 571 aa13.5□□□□□ -0.25
DDX39A-201ENST00000242776 MLXIPLQ9NP71 852 aa13.5□□□□□ -0.25
DDX39A-201ENST00000242776 FGF21Q9NSA1 209 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms