RNA–Protein interactions for RNA: ENST00000236192.11

VAMP4-201, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP4, Length 5,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-201ENST00000236192 SMURF2Q9HAU4 748 aa12.73□□□□□ -0.37
VAMP4-201ENST00000236192 TCRBV3S1A0A5B6 114 aa12.73□□□□□ -0.37
VAMP4-201ENST00000236192 MLYCDO95822 493 aa12.73□□□□□ -0.37
VAMP4-201ENST00000236192 HOXB8P17481 243 aaPredicted RBP12.73□□□□□ -0.37
VAMP4-201ENST00000236192 CLCN5P51795 746 aa12.73□□□□□ -0.37
VAMP4-201ENST00000236192 NHSL2Q5HYW2 709 aa12.73□□□□□ -0.37
VAMP4-201ENST00000236192 ZNF641Q96N77 438 aaPredicted RBP12.73□□□□□ -0.37
VAMP4-201ENST00000236192 MCMBPQ9BTE3 642 aa12.73□□□□□ -0.37
VAMP4-201ENST00000236192 PTGFRNQ9P2B2 879 aa12.73□□□□□ -0.37
VAMP4-201ENST00000236192 GMEB2Q9UKD1 530 aa12.73□□□□□ -0.37
VAMP4-201ENST00000236192 PCDHGB2Q9Y5G2 931 aa12.73□□□□□ -0.37
VAMP4-201ENST00000236192 SGTAO43765 313 aa12.73□□□□□ -0.37
VAMP4-201ENST00000236192 KHDRBS3O75525 346 aaKnown RBP12.73□□□□□ -0.37
VAMP4-201ENST00000236192 ATP4BP51164 291 aa12.73□□□□□ -0.37
VAMP4-201ENST00000236192 BCAT1P54687 386 aa12.73□□□□□ -0.37
VAMP4-201ENST00000236192 ZNF33BQ06732 778 aa12.73□□□□□ -0.37
VAMP4-201ENST00000236192 STX4Q12846 297 aa12.73□□□□□ -0.37
VAMP4-201ENST00000236192 TSTA3Q13630 321 aaPredicted RBP12.73□□□□□ -0.37
VAMP4-201ENST00000236192 ELOAQ14241 798 aaKnown RBP12.73□□□□□ -0.37
VAMP4-201ENST00000236192 COL19A1Q14993 1142 aa12.73□□□□□ -0.37
VAMP4-201ENST00000236192 PIK3R6Q5UE93 754 aa12.73□□□□□ -0.37
VAMP4-201ENST00000236192 CLEC6AQ6EIG7 209 aa12.73□□□□□ -0.37
VAMP4-201ENST00000236192 PMF1Q6P1K2 205 aa12.73□□□□□ -0.37
VAMP4-201ENST00000236192 ADAMTSL2Q86TH1 951 aa12.73□□□□□ -0.37
VAMP4-201ENST00000236192 IGDCC3Q8IVU1 814 aa12.73□□□□□ -0.37
VAMP4-201ENST00000236192 PIAS4Q8N2W9 510 aaPredicted RBP12.73□□□□□ -0.37
VAMP4-201ENST00000236192 ATAD1Q8NBU5 361 aa12.73□□□□□ -0.37
VAMP4-201ENST00000236192 CCDC115Q96NT0 180 aa12.73□□□□□ -0.37
VAMP4-201ENST00000236192 PFDN5Q99471 154 aa12.73□□□□□ -0.37
VAMP4-201ENST00000236192 NLNQ9BYT8 704 aa12.73□□□□□ -0.37
VAMP4-201ENST00000236192 IRGMA1A4Y4 181 aa12.73□□□□□ -0.37
VAMP4-201ENST00000236192 ISM1B1AKI9 464 aa12.73□□□□□ -0.37
VAMP4-201ENST00000236192 CXCR6O00574 342 aa12.73□□□□□ -0.37
VAMP4-201ENST00000236192 AP3D1O14617 1153 aa12.73□□□□□ -0.37
VAMP4-201ENST00000236192 PLA2G6O60733 806 aa12.73□□□□□ -0.37
VAMP4-201ENST00000236192 MRPS14O60783 128 aaKnown RBP12.73□□□□□ -0.37
VAMP4-201ENST00000236192 FGFR1P11362 822 aa12.73□□□□□ -0.37
VAMP4-201ENST00000236192 CPB1P15086 417 aa12.73□□□□□ -0.37
VAMP4-201ENST00000236192 GPR85P60893 370 aa12.73□□□□□ -0.37
VAMP4-201ENST00000236192 CD300CQ08708 224 aa12.73□□□□□ -0.37
VAMP4-201ENST00000236192 ADAM15Q13444 863 aa12.73□□□□□ -0.37
VAMP4-201ENST00000236192 MOB2Q70IA6 237 aa12.73□□□□□ -0.37
VAMP4-201ENST00000236192 ADGRF2Q8IZF7 708 aa12.73□□□□□ -0.37
VAMP4-201ENST00000236192 FSTL5Q8N475 847 aaPredicted RBP12.73□□□□□ -0.37
VAMP4-201ENST00000236192 PLD5Q8N7P1 536 aa12.73□□□□□ -0.37
VAMP4-201ENST00000236192 ZNF366Q8N895 744 aa12.73□□□□□ -0.37
VAMP4-201ENST00000236192 SSX3Q99909 188 aa12.73□□□□□ -0.37
VAMP4-201ENST00000236192 TIMM22Q9Y584 194 aa12.73□□□□□ -0.37
VAMP4-201ENST00000236192 CSADQ9Y600 493 aa12.73□□□□□ -0.37
VAMP4-201ENST00000236192 PRMT3O60678 531 aa12.72□□□□□ -0.37
VAMP4-201ENST00000236192 ZNF780AO75290 641 aaPredicted RBP12.72□□□□□ -0.37
VAMP4-201ENST00000236192 HTR1BP28222 390 aa12.72□□□□□ -0.37
VAMP4-201ENST00000236192 DEFA6Q01524 100 aa12.72□□□□□ -0.37
VAMP4-201ENST00000236192 TEAD4Q15561 434 aa12.72□□□□□ -0.37
VAMP4-201ENST00000236192 LCN8Q6JVE9 175 aa12.72□□□□□ -0.37
VAMP4-201ENST00000236192 NAPRTQ6XQN6 538 aa12.72□□□□□ -0.37
VAMP4-201ENST00000236192 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.72□□□□□ -0.37
VAMP4-201ENST00000236192 WDR49Q8IV35 697 aa12.72□□□□□ -0.37
VAMP4-201ENST00000236192 CCDC117Q8IWD4 279 aaPredicted RBP12.72□□□□□ -0.37
VAMP4-201ENST00000236192 UBQLNLQ8IYU4 475 aa12.72□□□□□ -0.37
VAMP4-201ENST00000236192 ZDHHC14Q8IZN3 488 aa12.72□□□□□ -0.37
VAMP4-201ENST00000236192 ZNF671Q8TAW3 534 aa12.72□□□□□ -0.37
VAMP4-201ENST00000236192 KAT2AQ92830 837 aa12.72□□□□□ -0.37
VAMP4-201ENST00000236192 IL20Q9NYY1 176 aa12.72□□□□□ -0.37
VAMP4-201ENST00000236192 ZNF451Q9Y4E5 1061 aa12.72□□□□□ -0.37
VAMP4-201ENST00000236192 CLCA3PQ9Y6N3 262 aa12.72□□□□□ -0.37
VAMP4-201ENST00000236192 SEC22BO75396 215 aa12.72□□□□□ -0.37
VAMP4-201ENST00000236192 PRG2P13727 222 aa12.72□□□□□ -0.37
VAMP4-201ENST00000236192 PTPN5P54829 565 aa12.72□□□□□ -0.37
VAMP4-201ENST00000236192 DUSP7Q16829 419 aa12.72□□□□□ -0.37
VAMP4-201ENST00000236192 OVOS1Q6IE37 1185 aa12.72□□□□□ -0.37
VAMP4-201ENST00000236192 ACOX2Q99424 681 aa12.72□□□□□ -0.37
VAMP4-201ENST00000236192 C12orf57Q99622 126 aa12.72□□□□□ -0.37
VAMP4-201ENST00000236192 PRMT8Q9NR22 394 aaPredicted RBP12.72□□□□□ -0.37
VAMP4-201ENST00000236192 AGPAT4Q9NRZ5 378 aa12.72□□□□□ -0.37
VAMP4-201ENST00000236192 NARFQ9UHQ1 456 aa12.72□□□□□ -0.37
VAMP4-201ENST00000236192 GSAPA4D1B5 854 aa12.72□□□□□ -0.37
VAMP4-201ENST00000236192 CRHBPP24387 322 aa12.72□□□□□ -0.37
VAMP4-201ENST00000236192 TOR2AQ5JU69 321 aa12.72□□□□□ -0.37
VAMP4-201ENST00000236192 SLC26A9Q7LBE3 791 aa12.72□□□□□ -0.37
VAMP4-201ENST00000236192 CIR1Q86X95 450 aaPredicted RBP12.72□□□□□ -0.37
VAMP4-201ENST00000236192 MAP4K3Q8IVH8 894 aa12.72□□□□□ -0.37
VAMP4-201ENST00000236192 ZDHHC21Q8IVQ6 265 aa12.72□□□□□ -0.37
VAMP4-201ENST00000236192 PDZD9Q8IXQ8 264 aa12.72□□□□□ -0.37
VAMP4-201ENST00000236192 OR7G3Q8NG95 312 aa12.72□□□□□ -0.37
VAMP4-201ENST00000236192 OR5J2Q8NH18 312 aa12.72□□□□□ -0.37
VAMP4-201ENST00000236192 ZNF675Q8TD23 568 aa12.72□□□□□ -0.37
VAMP4-201ENST00000236192 FAM129BQ96TA1 746 aa12.72□□□□□ -0.37
VAMP4-201ENST00000236192 AGAP2Q99490 1192 aa12.72□□□□□ -0.37
VAMP4-201ENST00000236192 TBL1YQ9BQ87 522 aa12.72□□□□□ -0.37
VAMP4-201ENST00000236192 NARFLQ9H6Q4 476 aa12.72□□□□□ -0.37
VAMP4-201ENST00000236192 TAS2R3Q9NYW6 316 aa12.72□□□□□ -0.37
VAMP4-201ENST00000236192 INTS6Q9UL03 887 aaKnown RBP12.72□□□□□ -0.37
VAMP4-201ENST00000236192 CNTN6Q9UQ52 1028 aa12.72□□□□□ -0.37
VAMP4-201ENST00000236192 MAN2B2Q9Y2E5 1009 aa12.72□□□□□ -0.37
VAMP4-201ENST00000236192 HSPE1-MOB4S4R3N1 261 aa12.72□□□□□ -0.37
VAMP4-201ENST00000236192 C9JVG2 144 aa12.72□□□□□ -0.37
VAMP4-201ENST00000236192 DHX15O43143 795 aaKnown RBP12.72□□□□□ -0.37
VAMP4-201ENST00000236192 VPS26AO75436 327 aa12.72□□□□□ -0.37
VAMP4-201ENST00000236192 IL18RAPO95256 599 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms