RNA–Protein interactions for RNA: ENST00000228425.10

PPFIBP1-201, Transcript of PPFIA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PPFIBP1, Length 5,933 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIBP1-201ENST00000228425 FOXM1Q08050 763 aa5.9□□□□□ -1.46
PPFIBP1-201ENST00000228425 ZNF844Q08AG5 666 aa5.9□□□□□ -1.46
PPFIBP1-201ENST00000228425 ECH1Q13011 328 aa5.9□□□□□ -1.46
PPFIBP1-201ENST00000228425 LRP8Q14114 963 aa5.9□□□□□ -1.46
PPFIBP1-201ENST00000228425 SULT1C3Q6IMI6 304 aa5.9□□□□□ -1.46
PPFIBP1-201ENST00000228425 C1orf186Q6ZWK4 172 aa5.9□□□□□ -1.46
PPFIBP1-201ENST00000228425 APTXQ7Z2E3 356 aaKnown RBP5.9□□□□□ -1.46
PPFIBP1-201ENST00000228425 NUP54Q7Z3B4 507 aa5.9□□□□□ -1.46
PPFIBP1-201ENST00000228425 TMEM161BQ8NDZ6 487 aa5.9□□□□□ -1.46
PPFIBP1-201ENST00000228425 TRPV1Q8NER1 839 aa5.9□□□□□ -1.46
PPFIBP1-201ENST00000228425 OR52K1Q8NGK4 314 aa5.9□□□□□ -1.46
PPFIBP1-201ENST00000228425 SGK3Q96BR1 496 aa5.9□□□□□ -1.46
PPFIBP1-201ENST00000228425 DNAJC19Q96DA6 116 aa5.9□□□□□ -1.46
PPFIBP1-201ENST00000228425 NXPE2Q96DL1 559 aa5.9□□□□□ -1.46
PPFIBP1-201ENST00000228425 RIOK2Q9BVS4 552 aaKnown RBP5.9□□□□□ -1.46
PPFIBP1-201ENST00000228425 ZYG11BQ9C0D3 744 aa5.9□□□□□ -1.46
PPFIBP1-201ENST00000228425 SMPD4Q9NXE4 827 aa5.9□□□□□ -1.46
PPFIBP1-201ENST00000228425 NCKIPSDQ9NZQ3 722 aa5.9□□□□□ -1.46
PPFIBP1-201ENST00000228425 PCDHGC3Q9UN70 934 aa5.9□□□□□ -1.46
PPFIBP1-201ENST00000228425 NDUFAF1Q9Y375 327 aa5.9□□□□□ -1.46
PPFIBP1-201ENST00000228425 HBS1LQ9Y450 684 aaKnown RBP5.9□□□□□ -1.46
PPFIBP1-201ENST00000228425 LTBP3Q9NS15 1303 aa5.9□□□□□ -1.47
PPFIBP1-201ENST00000228425 WDR81Q562E7 1941 aa5.9□□□□□ -1.47
PPFIBP1-201ENST00000228425 PCP4L1A6NKN8 68 aa5.9□□□□□ -1.47
PPFIBP1-201ENST00000228425 SNAP91O60641 907 aa5.9□□□□□ -1.47
PPFIBP1-201ENST00000228425 RAMP2O60895 175 aa5.9□□□□□ -1.47
PPFIBP1-201ENST00000228425 SMPD2O60906 423 aa5.9□□□□□ -1.47
PPFIBP1-201ENST00000228425 LTA4HP09960 611 aaKnown RBP5.9□□□□□ -1.47
PPFIBP1-201ENST00000228425 ZNF823P16415 610 aa5.9□□□□□ -1.47
PPFIBP1-201ENST00000228425 OGNP20774 298 aaKnown RBP5.9□□□□□ -1.47
PPFIBP1-201ENST00000228425 FSHRP23945 695 aa5.9□□□□□ -1.47
PPFIBP1-201ENST00000228425 BUD31P41223 144 aaPredicted RBP5.9□□□□□ -1.47
PPFIBP1-201ENST00000228425 OC90Q02509 493 aaPredicted RBP5.9□□□□□ -1.47
PPFIBP1-201ENST00000228425 RPA4Q13156 261 aa5.9□□□□□ -1.47
PPFIBP1-201ENST00000228425 ITGA7Q13683 1181 aa5.9□□□□□ -1.47
PPFIBP1-201ENST00000228425 ZNF460Q14592 562 aa5.9□□□□□ -1.47
PPFIBP1-201ENST00000228425 USF2Q15853 346 aaPredicted RBP5.9□□□□□ -1.47
PPFIBP1-201ENST00000228425 AGKQ53H12 422 aa5.9□□□□□ -1.47
PPFIBP1-201ENST00000228425 KLHL26Q53HC5 615 aa5.9□□□□□ -1.47
PPFIBP1-201ENST00000228425 TFDP3Q5H9I0 405 aa5.9□□□□□ -1.47
PPFIBP1-201ENST00000228425 DDX59Q5T1V6 619 aaKnown RBP eCLIP5.9□□□□□ -1.47
PPFIBP1-201ENST00000228425 CCBE1Q6UXH8 406 aaPredicted RBP5.9□□□□□ -1.47
PPFIBP1-201ENST00000228425 TPGS1Q6ZTW0 290 aa5.9□□□□□ -1.47
PPFIBP1-201ENST00000228425 TXNRD3Q86VQ6 643 aa5.9□□□□□ -1.47
PPFIBP1-201ENST00000228425 CPA6Q8N4T0 437 aa5.9□□□□□ -1.47
PPFIBP1-201ENST00000228425 MYDGFQ969H8 173 aa5.9□□□□□ -1.47
PPFIBP1-201ENST00000228425 KLF6Q99612 283 aaPredicted RBP5.9□□□□□ -1.47
PPFIBP1-201ENST00000228425 ARHGEF4Q9NR80 690 aa5.9□□□□□ -1.47
PPFIBP1-201ENST00000228425 SACM1LQ9NTJ5 587 aa5.9□□□□□ -1.47
PPFIBP1-201ENST00000228425 PACSIN3Q9UKS6 424 aa5.9□□□□□ -1.47
PPFIBP1-201ENST00000228425 ERGIC3Q9Y282 383 aa5.9□□□□□ -1.47
PPFIBP1-201ENST00000228425 FREM2Q5SZK8 3169 aa5.9□□□□□ -1.47
PPFIBP1-201ENST00000228425 COL11A2P13942 1736 aaPredicted RBP5.9□□□□□ -1.47
PPFIBP1-201ENST00000228425 A0A075B6Q4 140 aa5.9□□□□□ -1.47
PPFIBP1-201ENST00000228425 NPHP3-ACAD11A0A0J9YXS1 232 aa5.9□□□□□ -1.47
PPFIBP1-201ENST00000228425 LOC100506127A0A0U1RQW1 187 aa5.9□□□□□ -1.47
PPFIBP1-201ENST00000228425 CLPTM1O96005 669 aa5.9□□□□□ -1.47
PPFIBP1-201ENST00000228425 LDLRP01130 860 aa5.9□□□□□ -1.47
PPFIBP1-201ENST00000228425 RPLP1P05386 114 aaKnown RBP5.9□□□□□ -1.47
PPFIBP1-201ENST00000228425 ERCC2P18074 760 aa5.9□□□□□ -1.47
PPFIBP1-201ENST00000228425 PVALBP20472 110 aaPredicted RBP5.9□□□□□ -1.47
PPFIBP1-201ENST00000228425 KLRK1P26718 216 aa5.9□□□□□ -1.47
PPFIBP1-201ENST00000228425 NAMPTP43490 491 aa5.9□□□□□ -1.47
PPFIBP1-201ENST00000228425 ILF3Q12906 894 aaKnown RBP eCLIP5.9□□□□□ -1.47
PPFIBP1-201ENST00000228425 CCINQ13939 588 aa5.9□□□□□ -1.47
PPFIBP1-201ENST00000228425 LSM12Q3MHD2 195 aaKnown RBP5.9□□□□□ -1.47
PPFIBP1-201ENST00000228425 CRY2Q49AN0 593 aa5.9□□□□□ -1.47
PPFIBP1-201ENST00000228425 VPS26BQ4G0F5 336 aa5.9□□□□□ -1.47
PPFIBP1-201ENST00000228425 ZNF484Q5JVG2 852 aa5.9□□□□□ -1.47
PPFIBP1-201ENST00000228425 MARC1Q5VT66 337 aa5.9□□□□□ -1.47
PPFIBP1-201ENST00000228425 SLC9A9Q8IVB4 645 aa5.9□□□□□ -1.47
PPFIBP1-201ENST00000228425 LGI2Q8N0V4 545 aa5.9□□□□□ -1.47
PPFIBP1-201ENST00000228425 FAM169BQ8N8A8 192 aa5.9□□□□□ -1.47
PPFIBP1-201ENST00000228425 PPP1R13LQ8WUF5 828 aa5.9□□□□□ -1.47
PPFIBP1-201ENST00000228425 KCNE4Q8WWG9 221 aa5.9□□□□□ -1.47
PPFIBP1-201ENST00000228425 PRMT6Q96LA8 375 aaPredicted RBP5.9□□□□□ -1.47
PPFIBP1-201ENST00000228425 ZNF607Q96SK3 696 aa5.9□□□□□ -1.47
PPFIBP1-201ENST00000228425 DCUN1D5Q9BTE7 237 aa5.9□□□□□ -1.47
PPFIBP1-201ENST00000228425 OR10A4Q9H209 315 aa5.9□□□□□ -1.47
PPFIBP1-201ENST00000228425 TMEM27Q9HBJ8 222 aa5.9□□□□□ -1.47
PPFIBP1-201ENST00000228425 EXD2Q9NVH0 621 aa5.9□□□□□ -1.47
PPFIBP1-201ENST00000228425 TAS2R13Q9NYV9 303 aa5.9□□□□□ -1.47
PPFIBP1-201ENST00000228425 RABGEF1Q9UJ41 708 aa5.9□□□□□ -1.47
PPFIBP1-201ENST00000228425 CDH9Q9ULB4 789 aa5.9□□□□□ -1.47
PPFIBP1-201ENST00000228425 ROBO3Q96MS0 1386 aa5.89□□□□□ -1.47
PPFIBP1-201ENST00000228425 CYP3A7-CYP3A51PA0A087WV96 503 aa5.89□□□□□ -1.47
PPFIBP1-201ENST00000228425 TBC1D3DA0A087WVF3 549 aa5.89□□□□□ -1.47
PPFIBP1-201ENST00000228425 TBC1D3IA0A087WXS9 549 aa5.89□□□□□ -1.47
PPFIBP1-201ENST00000228425 TBC1D3EA0A087X179 549 aa5.89□□□□□ -1.47
PPFIBP1-201ENST00000228425 TBC1D3KA0A087X1G2 549 aa5.89□□□□□ -1.47
PPFIBP1-201ENST00000228425 TBC1D3FA6NER0 549 aaPredicted RBP5.89□□□□□ -1.47
PPFIBP1-201ENST00000228425 TBC1D3LB9A6J9 549 aa5.89□□□□□ -1.47
PPFIBP1-201ENST00000228425 CYTIPO60759 359 aa5.89□□□□□ -1.47
PPFIBP1-201ENST00000228425 SERPINB7O75635 380 aa5.89□□□□□ -1.47
PPFIBP1-201ENST00000228425 GABBR2O75899 941 aa5.89□□□□□ -1.47
PPFIBP1-201ENST00000228425 ASGR2P07307 311 aa5.89□□□□□ -1.47
PPFIBP1-201ENST00000228425 CYP3A4P08684 503 aa5.89□□□□□ -1.47
PPFIBP1-201ENST00000228425 TBC1D3HP0C7X1 549 aa5.89□□□□□ -1.47
PPFIBP1-201ENST00000228425 LAG3P18627 525 aa5.89□□□□□ -1.47
PPFIBP1-201ENST00000228425 DRD4P21917 467 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms