RNA–Protein interactions for RNA: ENST00000225696.8

NUP88-201, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 2,194 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-201ENST00000225696 RHNO1Q9BSD3 238 aa12.24□□□□□ -0.45
NUP88-201ENST00000225696 TBCDQ9BTW9 1192 aa12.24□□□□□ -0.45
NUP88-201ENST00000225696 ZYG11BQ9C0D3 744 aa12.24□□□□□ -0.45
NUP88-201ENST00000225696 HPS4Q9NQG7 708 aa12.24□□□□□ -0.45
NUP88-201ENST00000225696 SMPD4Q9NXE4 827 aa12.24□□□□□ -0.45
NUP88-201ENST00000225696 BAG5Q9UL15 447 aa12.24□□□□□ -0.45
NUP88-201ENST00000225696 ZNF232Q9UNY5 417 aa12.24□□□□□ -0.45
NUP88-201ENST00000225696 PMF1-BGLAPU3KQ54 211 aa12.24□□□□□ -0.45
NUP88-201ENST00000225696 U3KQV3 271 aa12.24□□□□□ -0.45
NUP88-201ENST00000225696 NLRC5Q86WI3 1866 aa12.24□□□□□ -0.45
NUP88-201ENST00000225696 PTPRDP23468 1912 aa12.23□□□□□ -0.45
NUP88-201ENST00000225696 FAM92AA1XBS5 289 aa12.23□□□□□ -0.45
NUP88-201ENST00000225696 CST1P01037 141 aa12.23□□□□□ -0.45
NUP88-201ENST00000225696 ANXA6P08133 673 aa12.23□□□□□ -0.45
NUP88-201ENST00000225696 CNPP09543 421 aaKnown RBP12.23□□□□□ -0.45
NUP88-201ENST00000225696 RHOQP17081 205 aa12.23□□□□□ -0.45
NUP88-201ENST00000225696 JAK1P23458 1154 aa12.23□□□□□ -0.45
NUP88-201ENST00000225696 HTR7P34969 479 aa12.23□□□□□ -0.45
NUP88-201ENST00000225696 ARL1P40616 181 aaPredicted RBP12.23□□□□□ -0.45
NUP88-201ENST00000225696 ISL1P61371 349 aa12.23□□□□□ -0.45
NUP88-201ENST00000225696 PPP2R2BQ00005 443 aa12.23□□□□□ -0.45
NUP88-201ENST00000225696 NRG1Q02297 640 aaPredicted RBP12.23□□□□□ -0.45
NUP88-201ENST00000225696 GRIK2Q13002 908 aa12.23□□□□□ -0.45
NUP88-201ENST00000225696 PTGR1Q14914 329 aa12.23□□□□□ -0.45
NUP88-201ENST00000225696 LAPTM4AQ15012 233 aa12.23□□□□□ -0.45
NUP88-201ENST00000225696 PTPRNQ16849 979 aa12.23□□□□□ -0.45
NUP88-201ENST00000225696 TYSND1Q2T9J0 566 aa12.23□□□□□ -0.45
NUP88-201ENST00000225696 ATP6AP1LQ52LC2 224 aa12.23□□□□□ -0.45
NUP88-201ENST00000225696 RBM48Q5RL73 367 aaKnown RBP12.23□□□□□ -0.45
NUP88-201ENST00000225696 OVOS1Q6IE37 1185 aa12.23□□□□□ -0.45
NUP88-201ENST00000225696 SPESP1Q6UW49 350 aa12.23□□□□□ -0.45
NUP88-201ENST00000225696 DNAJC14Q6Y2X3 702 aaPredicted RBP12.23□□□□□ -0.45
NUP88-201ENST00000225696 GPRIN3Q6ZVF9 776 aa12.23□□□□□ -0.45
NUP88-201ENST00000225696 MIB1Q86YT6 1006 aa12.23□□□□□ -0.45
NUP88-201ENST00000225696 FAM126BQ8IXS8 530 aa12.23□□□□□ -0.45
NUP88-201ENST00000225696 DPP10Q8N608 796 aa12.23□□□□□ -0.45
NUP88-201ENST00000225696 OR4K2Q8NGD2 314 aa12.23□□□□□ -0.45
NUP88-201ENST00000225696 OR10A6Q8NH74 314 aa12.23□□□□□ -0.45
NUP88-201ENST00000225696 BRSK1Q8TDC3 778 aa12.23□□□□□ -0.45
NUP88-201ENST00000225696 MUL1Q969V5 352 aa12.23□□□□□ -0.45
NUP88-201ENST00000225696 EXOC2Q96KP1 924 aa12.23□□□□□ -0.45
NUP88-201ENST00000225696 C1orf74Q96LT6 269 aa12.23□□□□□ -0.45
NUP88-201ENST00000225696 ZNF347Q96SE7 839 aa12.23□□□□□ -0.45
NUP88-201ENST00000225696 HERC2P3Q9BVR0 1158 aa12.23□□□□□ -0.45
NUP88-201ENST00000225696 OSBPL10Q9BXB5 764 aa12.23□□□□□ -0.45
NUP88-201ENST00000225696 SLC6A13Q9NSD5 602 aa12.23□□□□□ -0.45
NUP88-201ENST00000225696 TMEM248Q9NWD8 314 aa12.23□□□□□ -0.45
NUP88-201ENST00000225696 TAS2R13Q9NYV9 303 aa12.23□□□□□ -0.45
NUP88-201ENST00000225696 ZIM2Q9NZV7 527 aa12.23□□□□□ -0.45
NUP88-201ENST00000225696 RNF181Q9P0P0 153 aa12.23□□□□□ -0.45
NUP88-201ENST00000225696 MAGEL2Q9UJ55 1249 aa12.23□□□□□ -0.45
NUP88-201ENST00000225696 A0A0D9SEW6 157 aa12.23□□□□□ -0.45
NUP88-201ENST00000225696 C17orf102A2RUQ5 167 aa12.23□□□□□ -0.45
NUP88-201ENST00000225696 MGEA5O60502 916 aa12.23□□□□□ -0.45
NUP88-201ENST00000225696 KATNA1O75449 491 aa12.23□□□□□ -0.45
NUP88-201ENST00000225696 CAPN1P07384 714 aa12.23□□□□□ -0.45
NUP88-201ENST00000225696 PFKLP17858 780 aa12.23□□□□□ -0.45
NUP88-201ENST00000225696 TGFBR1P36897 503 aa12.23□□□□□ -0.45
NUP88-201ENST00000225696 RGRP47804 291 aa12.23□□□□□ -0.45
NUP88-201ENST00000225696 PIK3CGP48736 1102 aa12.23□□□□□ -0.45
NUP88-201ENST00000225696 MRPL19P49406 292 aaKnown RBP12.23□□□□□ -0.45
NUP88-201ENST00000225696 CHRNB3Q05901 458 aa12.23□□□□□ -0.45
NUP88-201ENST00000225696 RAD51Q06609 339 aa12.23□□□□□ -0.45
NUP88-201ENST00000225696 EFEMP1Q12805 493 aa12.23□□□□□ -0.45
NUP88-201ENST00000225696 ADPRMQ3LIE5 342 aa12.23□□□□□ -0.45
NUP88-201ENST00000225696 GTDC1Q4AE62 458 aa12.23□□□□□ -0.45
NUP88-201ENST00000225696 FAM98BQ52LJ0 330 aaKnown RBP12.23□□□□□ -0.45
NUP88-201ENST00000225696 ZNF362Q5T0B9 420 aaPredicted RBP12.23□□□□□ -0.45
NUP88-201ENST00000225696 C1QTNF12Q5T7M4 302 aa12.23□□□□□ -0.45
NUP88-201ENST00000225696 LAIR1Q6GTX8 287 aa12.23□□□□□ -0.45
NUP88-201ENST00000225696 PSAPL1Q6NUJ1 521 aa12.23□□□□□ -0.45
NUP88-201ENST00000225696 CYP20A1Q6UW02 462 aa12.23□□□□□ -0.45
NUP88-201ENST00000225696 MDGA1Q8NFP4 955 aa12.23□□□□□ -0.45
NUP88-201ENST00000225696 CCDC97Q96F63 343 aaPredicted RBP12.23□□□□□ -0.45
NUP88-201ENST00000225696 BARD1Q99728 777 aaKnown RBP12.23□□□□□ -0.45
NUP88-201ENST00000225696 CCDC90BQ9GZT6 254 aa12.23□□□□□ -0.45
NUP88-201ENST00000225696 POPDC3Q9HBV1 291 aa12.23□□□□□ -0.45
NUP88-201ENST00000225696 AKIP1Q9NQ31 210 aa12.23□□□□□ -0.45
NUP88-201ENST00000225696 POLE4Q9NR33 117 aa12.23□□□□□ -0.45
NUP88-201ENST00000225696 LIMD1Q9UGP4 676 aa12.23□□□□□ -0.45
NUP88-201ENST00000225696 ENPP5Q9UJA9 477 aa12.23□□□□□ -0.45
NUP88-201ENST00000225696 B3GNT3Q9Y2A9 372 aa12.23□□□□□ -0.45
NUP88-201ENST00000225696 POLR3HQ9Y535 204 aaPredicted RBP12.23□□□□□ -0.45
NUP88-201ENST00000225696 HTTP42858 3142 aa12.22□□□□□ -0.45
NUP88-201ENST00000225696 TYW5A2RUC4 315 aaKnown RBP12.22□□□□□ -0.45
NUP88-201ENST00000225696 CLDN25C9JDP6 229 aa12.22□□□□□ -0.45
NUP88-201ENST00000225696 SLC1A7O00341 560 aa12.22□□□□□ -0.45
NUP88-201ENST00000225696 KLK8O60259 260 aa12.22□□□□□ -0.45
NUP88-201ENST00000225696 MITFO75030 526 aaPredicted RBP12.22□□□□□ -0.45
NUP88-201ENST00000225696 UGT2B11O75310 529 aa12.22□□□□□ -0.45
NUP88-201ENST00000225696 TULP3O75386 442 aa12.22□□□□□ -0.45
NUP88-201ENST00000225696 PRKD3O94806 890 aa12.22□□□□□ -0.45
NUP88-201ENST00000225696 CD6P30203 668 aa12.22□□□□□ -0.45
NUP88-201ENST00000225696 GRK4P32298 578 aa12.22□□□□□ -0.45
NUP88-201ENST00000225696 MAP2K4P45985 399 aa12.22□□□□□ -0.45
NUP88-201ENST00000225696 TPD52P55327 224 aaPredicted RBP12.22□□□□□ -0.45
NUP88-201ENST00000225696 TBX4P57082 545 aa12.22□□□□□ -0.45
NUP88-201ENST00000225696 RPS3AP61247 264 aaKnown RBP12.22□□□□□ -0.45
NUP88-201ENST00000225696 EMX1Q04741 257 aaPredicted RBP12.22□□□□□ -0.45
NUP88-201ENST00000225696 SERINC3Q13530 473 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms