RNA–Protein interactions for RNA: ENST00000223641.4

SEC61B-201, Transcript of Sec61 translocon beta subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61B, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61B-201ENST00000223641 SUSD2Q9UGT4 822 aa13.8□□□□□ -0.2
SEC61B-201ENST00000223641 ZNHIT2Q9UHR6 403 aa13.8□□□□□ -0.2
SEC61B-201ENST00000223641 ST14Q9Y5Y6 855 aa13.8□□□□□ -0.2
SEC61B-201ENST00000223641 ZFC3H1O60293 1989 aaKnown RBP13.8□□□□□ -0.2
SEC61B-201ENST00000223641 LIN7AO14910 233 aaPredicted RBP13.79□□□□□ -0.2
SEC61B-201ENST00000223641 SLCO2B1O94956 709 aa13.79□□□□□ -0.2
SEC61B-201ENST00000223641 TSPAN12O95859 305 aa13.79□□□□□ -0.2
SEC61B-201ENST00000223641 CBSLP0DN79 551 aa13.79□□□□□ -0.2
SEC61B-201ENST00000223641 PYGBP11216 843 aa13.79□□□□□ -0.2
SEC61B-201ENST00000223641 COL6A2P12110 1019 aa13.79□□□□□ -0.2
SEC61B-201ENST00000223641 GNSP15586 552 aa13.79□□□□□ -0.2
SEC61B-201ENST00000223641 ITGB6P18564 788 aa13.79□□□□□ -0.2
SEC61B-201ENST00000223641 KRT4P19013 534 aa13.79□□□□□ -0.2
SEC61B-201ENST00000223641 CBSP35520 551 aa13.79□□□□□ -0.2
SEC61B-201ENST00000223641 CSNK1EP49674 416 aaKnown RBP13.79□□□□□ -0.2
SEC61B-201ENST00000223641 CLCNKAP51800 687 aa13.79□□□□□ -0.2
SEC61B-201ENST00000223641 HK3P52790 923 aa13.79□□□□□ -0.2
SEC61B-201ENST00000223641 PDAP1Q13442 181 aaKnown RBP13.79□□□□□ -0.2
SEC61B-201ENST00000223641 PPM1JQ5JR12 505 aa13.79□□□□□ -0.2
SEC61B-201ENST00000223641 ZC3H14Q6PJT7 736 aaKnown RBP13.79□□□□□ -0.2
SEC61B-201ENST00000223641 CRTC3Q6UUV7 619 aa13.79□□□□□ -0.2
SEC61B-201ENST00000223641 LAYNQ6UX15 382 aa13.79□□□□□ -0.2
SEC61B-201ENST00000223641 OTOAQ7RTW8 1153 aa13.79□□□□□ -0.2
SEC61B-201ENST00000223641 LCA5Q86VQ0 697 aa13.79□□□□□ -0.2
SEC61B-201ENST00000223641 AMZ2Q86W34 360 aa13.79□□□□□ -0.2
SEC61B-201ENST00000223641 PARGQ86W56 976 aa13.79□□□□□ -0.2
SEC61B-201ENST00000223641 GALNT13Q8IUC8 556 aa13.79□□□□□ -0.2
SEC61B-201ENST00000223641 SPNS2Q8IVW8 549 aa13.79□□□□□ -0.2
SEC61B-201ENST00000223641 SRRM1Q8IYB3 904 aaKnown RBP13.79□□□□□ -0.2
SEC61B-201ENST00000223641 CENPLQ8N0S6 344 aaPredicted RBP13.79□□□□□ -0.2
SEC61B-201ENST00000223641 ZBTB2Q8N680 514 aa13.79□□□□□ -0.2
SEC61B-201ENST00000223641 HM13Q8TCT9 377 aa13.79□□□□□ -0.2
SEC61B-201ENST00000223641 ANKRD49Q8WVL7 239 aa13.79□□□□□ -0.2
SEC61B-201ENST00000223641 ASZ1Q8WWH4 475 aa13.79□□□□□ -0.2
SEC61B-201ENST00000223641 ELMO1Q92556 727 aa13.79□□□□□ -0.2
SEC61B-201ENST00000223641 TSACCQ96A04 125 aaPredicted RBP13.79□□□□□ -0.2
SEC61B-201ENST00000223641 SKA1Q96BD8 255 aa13.79□□□□□ -0.2
SEC61B-201ENST00000223641 ALKBH8Q96BT7 664 aaKnown RBP13.79□□□□□ -0.2
SEC61B-201ENST00000223641 ERVMER34-1Q9H9K5 563 aa13.79□□□□□ -0.2
SEC61B-201ENST00000223641 CARS2Q9HA77 564 aaKnown RBP13.79□□□□□ -0.2
SEC61B-201ENST00000223641 CYP4F12Q9HCS2 524 aa13.79□□□□□ -0.2
SEC61B-201ENST00000223641 SSU72Q9NP77 194 aaKnown RBP13.79□□□□□ -0.2
SEC61B-201ENST00000223641 MED4Q9NPJ6 270 aa13.79□□□□□ -0.2
SEC61B-201ENST00000223641 TM7SF3Q9NS93 570 aa13.79□□□□□ -0.2
SEC61B-201ENST00000223641 KLF15Q9UIH9 416 aa13.79□□□□□ -0.2
SEC61B-201ENST00000223641 TRMT6Q9UJA5 497 aaKnown RBP13.79□□□□□ -0.2
SEC61B-201ENST00000223641 NOVA2Q9UNW9 492 aaKnown RBP13.79□□□□□ -0.2
SEC61B-201ENST00000223641 ACOT9Q9Y305 439 aa13.79□□□□□ -0.2
SEC61B-201ENST00000223641 PRKAB1Q9Y478 270 aa13.79□□□□□ -0.2
SEC61B-201ENST00000223641 CACNA1EQ15878 2313 aa13.78□□□□□ -0.2
SEC61B-201ENST00000223641 A0A087X1B8 175 aa13.78□□□□□ -0.2
SEC61B-201ENST00000223641 HMGB1P1B2RPK0 211 aaPredicted RBP13.78□□□□□ -0.2
SEC61B-201ENST00000223641 TYROBPO43914 113 aa13.78□□□□□ -0.2
SEC61B-201ENST00000223641 RASGRP1O95267 797 aa13.78□□□□□ -0.2
SEC61B-201ENST00000223641 TNFP01375 233 aa13.78□□□□□ -0.2
SEC61B-201ENST00000223641 CSF2P04141 144 aa13.78□□□□□ -0.2
SEC61B-201ENST00000223641 CREB1P16220 341 aa13.78□□□□□ -0.2
SEC61B-201ENST00000223641 CTSKP43235 329 aa13.78□□□□□ -0.2
SEC61B-201ENST00000223641 GNPDA1P46926 289 aa13.78□□□□□ -0.2
SEC61B-201ENST00000223641 BLKP51451 505 aa13.78□□□□□ -0.2
SEC61B-201ENST00000223641 BNC1Q01954 994 aa13.78□□□□□ -0.2
SEC61B-201ENST00000223641 PLOD1Q02809 727 aaPredicted RBP13.78□□□□□ -0.2
SEC61B-201ENST00000223641 PPARDQ03181 441 aa13.78□□□□□ -0.2
SEC61B-201ENST00000223641 TCF15Q12870 199 aa13.78□□□□□ -0.2
SEC61B-201ENST00000223641 DLG1Q12959 904 aa13.78□□□□□ -0.2
SEC61B-201ENST00000223641 RPA4Q13156 261 aa13.78□□□□□ -0.2
SEC61B-201ENST00000223641 LRP8Q14114 963 aa13.78□□□□□ -0.2
SEC61B-201ENST00000223641 TEAD4Q15561 434 aa13.78□□□□□ -0.2
SEC61B-201ENST00000223641 TTLL9Q3SXZ7 439 aa13.78□□□□□ -0.2
SEC61B-201ENST00000223641 TAF1BQ53T94 588 aaPredicted RBP13.78□□□□□ -0.2
SEC61B-201ENST00000223641 ACSBG2Q5FVE4 666 aa13.78□□□□□ -0.2
SEC61B-201ENST00000223641 METRNLQ641Q3 311 aa13.78□□□□□ -0.2
SEC61B-201ENST00000223641 CYHR1Q6ZMK1 362 aa13.78□□□□□ -0.2
SEC61B-201ENST00000223641 RAPH1Q70E73 1250 aa13.78□□□□□ -0.2
SEC61B-201ENST00000223641 CHST15Q7LFX5 561 aaPredicted RBP13.78□□□□□ -0.2
SEC61B-201ENST00000223641 RASGRP3Q8IV61 690 aa13.78□□□□□ -0.2
SEC61B-201ENST00000223641 NKAPQ8N5F7 415 aaKnown RBP13.78□□□□□ -0.2
SEC61B-201ENST00000223641 GOLGA6L1Q8N7Z2 621 aa13.78□□□□□ -0.2
SEC61B-201ENST00000223641 BANPQ8N9N5 519 aa13.78□□□□□ -0.2
SEC61B-201ENST00000223641 GLMNQ92990 594 aa13.78□□□□□ -0.2
SEC61B-201ENST00000223641 FAM136AQ96C01 138 aa13.78□□□□□ -0.2
SEC61B-201ENST00000223641 GPR78Q96P69 363 aa13.78□□□□□ -0.2
SEC61B-201ENST00000223641 OR2M4Q96R27 311 aa13.78□□□□□ -0.2
SEC61B-201ENST00000223641 DPEP2Q9H4A9 486 aa13.78□□□□□ -0.2
SEC61B-201ENST00000223641 COG4Q9H9E3 785 aa13.78□□□□□ -0.2
SEC61B-201ENST00000223641 SARS2Q9NP81 518 aaKnown RBP13.78□□□□□ -0.2
SEC61B-201ENST00000223641 TLK1Q9UKI8 766 aa13.78□□□□□ -0.2
SEC61B-201ENST00000223641 ANKRD6Q9Y2G4 727 aa13.78□□□□□ -0.2
SEC61B-201ENST00000223641 ATXN2Q99700 1313 aaKnown RBP13.78□□□□□ -0.2
SEC61B-201ENST00000223641 PI4KAP42356 2102 aa13.78□□□□□ -0.2
SEC61B-201ENST00000223641 MYO15AQ9UKN7 3530 aa13.77□□□□□ -0.2
SEC61B-201ENST00000223641 GOLGA8RI6L899 631 aa13.77□□□□□ -0.21
SEC61B-201ENST00000223641 KLHL2O95198 593 aa13.77□□□□□ -0.21
SEC61B-201ENST00000223641 EPN2O95208 641 aa13.77□□□□□ -0.21
SEC61B-201ENST00000223641 APOA4P06727 396 aa13.77□□□□□ -0.21
SEC61B-201ENST00000223641 GSTA1P08263 222 aa13.77□□□□□ -0.21
SEC61B-201ENST00000223641 CCDC166P0CW27 439 aa13.77□□□□□ -0.21
SEC61B-201ENST00000223641 ENO3P13929 434 aaPredicted RBP13.77□□□□□ -0.21
SEC61B-201ENST00000223641 NME1P15531 152 aaKnown RBP13.77□□□□□ -0.21
SEC61B-201ENST00000223641 DGKAP23743 735 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms