RNA–Protein interactions for RNA: ENST00000222345.10

SIPA1L3-201, Transcript of signal induced proliferation associated 1 like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIPA1L3, Length 7,987 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1L3-201ENST00000222345 EI24O14681 340 aa13.56□□□□□ -0.24
SIPA1L3-201ENST00000222345 SPTLC1O15269 473 aa13.56□□□□□ -0.24
SIPA1L3-201ENST00000222345 KERAO60938 352 aa13.56□□□□□ -0.24
SIPA1L3-201ENST00000222345 CELF2O95319 508 aaKnown RBP13.56□□□□□ -0.24
SIPA1L3-201ENST00000222345 HOXC6P09630 235 aa13.56□□□□□ -0.24
SIPA1L3-201ENST00000222345 AP5B1Q2VPB7 878 aa13.56□□□□□ -0.24
SIPA1L3-201ENST00000222345 GNASQ5JWF2 1037 aa13.56□□□□□ -0.24
SIPA1L3-201ENST00000222345 BRMS1LQ5PSV4 323 aa13.56□□□□□ -0.24
SIPA1L3-201ENST00000222345 PARK7Q99497 189 aaKnown RBP13.56□□□□□ -0.24
SIPA1L3-201ENST00000222345 ATP13A1Q9HD20 1204 aa13.56□□□□□ -0.24
SIPA1L3-201ENST00000222345 SLC7A8Q9UHI5 535 aa13.56□□□□□ -0.24
SIPA1L3-201ENST00000222345 RPH3AQ9Y2J0 694 aaPredicted RBP13.56□□□□□ -0.24
SIPA1L3-201ENST00000222345 RCCD1A6NED2 376 aa13.56□□□□□ -0.24
SIPA1L3-201ENST00000222345 E5RJQ4 531 aa13.56□□□□□ -0.24
SIPA1L3-201ENST00000222345 HOXA2O43364 376 aa13.56□□□□□ -0.24
SIPA1L3-201ENST00000222345 OR10H2O60403 315 aa13.56□□□□□ -0.24
SIPA1L3-201ENST00000222345 SRCP12931 536 aa13.56□□□□□ -0.24
SIPA1L3-201ENST00000222345 LAMTOR4Q0VGL1 99 aa13.56□□□□□ -0.24
SIPA1L3-201ENST00000222345 PRKD1Q15139 912 aaPredicted RBP13.56□□□□□ -0.24
SIPA1L3-201ENST00000222345 TGFBIQ15582 683 aa13.56□□□□□ -0.24
SIPA1L3-201ENST00000222345 BRINP3Q76B58 766 aa13.56□□□□□ -0.24
SIPA1L3-201ENST00000222345 FAM83AQ86UY5 434 aa13.56□□□□□ -0.24
SIPA1L3-201ENST00000222345 UBQLNLQ8IYU4 475 aa13.56□□□□□ -0.24
SIPA1L3-201ENST00000222345 EXOC2Q96KP1 924 aa13.56□□□□□ -0.24
SIPA1L3-201ENST00000222345 SAV1Q9H4B6 383 aaPredicted RBP13.56□□□□□ -0.24
SIPA1L3-201ENST00000222345 OR12D3Q9UGF7 316 aa13.56□□□□□ -0.24
SIPA1L3-201ENST00000222345 ROBO2Q9HCK4 1378 aa13.56□□□□□ -0.24
SIPA1L3-201ENST00000222345 C9IYK1 514 aa13.56□□□□□ -0.24
SIPA1L3-201ENST00000222345 ITM2AO43736 263 aa13.56□□□□□ -0.24
SIPA1L3-201ENST00000222345 CSTF2P33240 577 aaKnown RBP eCLIP13.56□□□□□ -0.24
SIPA1L3-201ENST00000222345 GBX2P52951 348 aaPredicted RBP13.56□□□□□ -0.24
SIPA1L3-201ENST00000222345 PNLIPRP1P54315 467 aa13.56□□□□□ -0.24
SIPA1L3-201ENST00000222345 GJA9P57773 515 aa13.56□□□□□ -0.24
SIPA1L3-201ENST00000222345 PPP3CAQ08209 521 aa13.56□□□□□ -0.24
SIPA1L3-201ENST00000222345 PLEKHN1Q494U1 663 aaPredicted RBP13.56□□□□□ -0.24
SIPA1L3-201ENST00000222345 DET1Q7L5Y6 550 aa13.56□□□□□ -0.24
SIPA1L3-201ENST00000222345 RANBP3LQ86VV4 465 aaPredicted RBP13.56□□□□□ -0.24
SIPA1L3-201ENST00000222345 OR10H5Q8NGA6 315 aa13.56□□□□□ -0.24
SIPA1L3-201ENST00000222345 MAELQ96JY0 434 aaKnown RBP13.56□□□□□ -0.24
SIPA1L3-201ENST00000222345 SLC39A3Q9BRY0 314 aa13.56□□□□□ -0.24
SIPA1L3-201ENST00000222345 ZNF334Q9HCZ1 680 aaPredicted RBP13.56□□□□□ -0.24
SIPA1L3-201ENST00000222345 CALML5Q9NZT1 146 aa13.56□□□□□ -0.24
SIPA1L3-201ENST00000222345 RFPL1O75677 317 aa13.56□□□□□ -0.24
SIPA1L3-201ENST00000222345 RGS6P49758 472 aa13.56□□□□□ -0.24
SIPA1L3-201ENST00000222345 PPP4CP60510 307 aa13.56□□□□□ -0.24
SIPA1L3-201ENST00000222345 SMARCB1Q12824 385 aa13.56□□□□□ -0.24
SIPA1L3-201ENST00000222345 AIMP2Q13155 320 aaKnown RBP13.56□□□□□ -0.24
SIPA1L3-201ENST00000222345 TMEM86AQ8N2M4 240 aa13.56□□□□□ -0.24
SIPA1L3-201ENST00000222345 CEP295NLQ96MC4 621 aa13.56□□□□□ -0.24
SIPA1L3-201ENST00000222345 NUSAP1Q9BXS6 441 aaKnown RBP13.56□□□□□ -0.24
SIPA1L3-201ENST00000222345 RIOX1Q9H6W3 641 aa13.56□□□□□ -0.24
SIPA1L3-201ENST00000222345 WDR55Q9H6Y2 383 aaPredicted RBP13.56□□□□□ -0.24
SIPA1L3-201ENST00000222345 PLEKHA1Q9HB21 404 aa13.56□□□□□ -0.24
SIPA1L3-201ENST00000222345 FOLH1BQ9HBA9 442 aa13.56□□□□□ -0.24
SIPA1L3-201ENST00000222345 KCNN3Q9UGI6 736 aa13.56□□□□□ -0.24
SIPA1L3-201ENST00000222345 IKZF2Q9UKS7 526 aa13.56□□□□□ -0.24
SIPA1L3-201ENST00000222345 PCDHB1Q9Y5F3 818 aa13.56□□□□□ -0.24
SIPA1L3-201ENST00000222345 PER2O15055 1255 aa13.56□□□□□ -0.24
SIPA1L3-201ENST00000222345 ZNF3P17036 446 aa13.56□□□□□ -0.24
SIPA1L3-201ENST00000222345 CHMP24386 653 aa13.56□□□□□ -0.24
SIPA1L3-201ENST00000222345 GRIA2P42262 883 aa13.56□□□□□ -0.24
SIPA1L3-201ENST00000222345 LCP2Q13094 533 aa13.56□□□□□ -0.24
SIPA1L3-201ENST00000222345 COQ8AQ8NI60 647 aa13.56□□□□□ -0.24
SIPA1L3-201ENST00000222345 HYLS1Q96M11 299 aa13.56□□□□□ -0.24
SIPA1L3-201ENST00000222345 CCDC32Q9BV29 185 aa13.56□□□□□ -0.24
SIPA1L3-201ENST00000222345 ASB8Q9H765 288 aa13.56□□□□□ -0.24
SIPA1L3-201ENST00000222345 C11orf16Q9NQ32 467 aa13.56□□□□□ -0.24
SIPA1L3-201ENST00000222345 ABCD2Q9UBJ2 740 aa13.56□□□□□ -0.24
SIPA1L3-201ENST00000222345 NR2E1Q9Y466 385 aa13.56□□□□□ -0.24
SIPA1L3-201ENST00000222345 DAGLAQ9Y4D2 1042 aa13.56□□□□□ -0.24
SIPA1L3-201ENST00000222345 DCDC2CA8MYV0 355 aa13.56□□□□□ -0.24
SIPA1L3-201ENST00000222345 LRATO95237 230 aa13.56□□□□□ -0.24
SIPA1L3-201ENST00000222345 CSF1RP07333 972 aa13.56□□□□□ -0.24
SIPA1L3-201ENST00000222345 LPOP22079 712 aaPredicted RBP13.56□□□□□ -0.24
SIPA1L3-201ENST00000222345 PPATQ06203 517 aa13.56□□□□□ -0.24
SIPA1L3-201ENST00000222345 ARL13AQ5H913 290 aaPredicted RBP13.56□□□□□ -0.24
SIPA1L3-201ENST00000222345 SLC44A3Q8N4M1 653 aa13.56□□□□□ -0.24
SIPA1L3-201ENST00000222345 NINQ8N4C6 2090 aa13.55□□□□□ -0.24
SIPA1L3-201ENST00000222345 SSX4O60224 188 aa13.55□□□□□ -0.24
SIPA1L3-201ENST00000222345 DFNA5O60443 496 aa13.55□□□□□ -0.24
SIPA1L3-201ENST00000222345 PTTG1O95997 202 aa13.55□□□□□ -0.24
SIPA1L3-201ENST00000222345 IFNA17P01571 189 aa13.55□□□□□ -0.24
SIPA1L3-201ENST00000222345 AOC1P19801 751 aa13.55□□□□□ -0.24
SIPA1L3-201ENST00000222345 MCCD1P59942 119 aaPredicted RBP13.55□□□□□ -0.24
SIPA1L3-201ENST00000222345 PSMA6P60900 246 aaKnown RBP13.55□□□□□ -0.24
SIPA1L3-201ENST00000222345 E2F1Q01094 437 aa13.55□□□□□ -0.24
SIPA1L3-201ENST00000222345 RASGEF1BQ0VAM2 473 aa13.55□□□□□ -0.24
SIPA1L3-201ENST00000222345 C3orf67Q6ZVT6 689 aa13.55□□□□□ -0.24
SIPA1L3-201ENST00000222345 CHSY3Q70JA7 882 aa13.55□□□□□ -0.24
SIPA1L3-201ENST00000222345 ANKRD13BQ86YJ7 626 aa13.55□□□□□ -0.24
SIPA1L3-201ENST00000222345 CPB2Q96IY4 423 aa13.55□□□□□ -0.24
SIPA1L3-201ENST00000222345 TMEM246Q9BRR3 403 aa13.55□□□□□ -0.24
SIPA1L3-201ENST00000222345 CPNE5Q9HCH3 593 aa13.55□□□□□ -0.24
SIPA1L3-201ENST00000222345 HCN2Q9UL51 889 aa13.55□□□□□ -0.24
SIPA1L3-201ENST00000222345 CHD2O14647 1828 aaKnown RBP13.55□□□□□ -0.24
SIPA1L3-201ENST00000222345 C17orf102A2RUQ5 167 aa13.55□□□□□ -0.24
SIPA1L3-201ENST00000222345 TP73O15350 636 aa13.55□□□□□ -0.24
SIPA1L3-201ENST00000222345 IFNA2P01563 188 aa13.55□□□□□ -0.24
SIPA1L3-201ENST00000222345 GIMD1P0DJR0 217 aa13.55□□□□□ -0.24
SIPA1L3-201ENST00000222345 LSAMPQ13449 338 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms