RNA–Protein interactions for RNA: ENST00000066544.7

CDC27-201, Transcript of cell division cycle 27, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDC27, Length 5,801 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-201ENST00000066544 C2orf78A6NCI8 922 aa8.17□□□□□ -1.1
CDC27-201ENST00000066544 COCHO43405 550 aa8.17□□□□□ -1.1
CDC27-201ENST00000066544 MLYCDO95822 493 aa8.17□□□□□ -1.1
CDC27-201ENST00000066544 B3GALT4O96024 378 aa8.17□□□□□ -1.1
CDC27-201ENST00000066544 GPIP06744 558 aa8.17□□□□□ -1.1
CDC27-201ENST00000066544 HOXB8P17481 243 aaPredicted RBP8.17□□□□□ -1.1
CDC27-201ENST00000066544 TTPAP49638 278 aa8.17□□□□□ -1.1
CDC27-201ENST00000066544 FCGRTP55899 365 aa8.17□□□□□ -1.1
CDC27-201ENST00000066544 ATP6AP1Q15904 470 aa8.17□□□□□ -1.1
CDC27-201ENST00000066544 USP41Q3LFD5 358 aa8.17□□□□□ -1.1
CDC27-201ENST00000066544 FAM174BQ3ZCQ3 159 aa8.17□□□□□ -1.1
CDC27-201ENST00000066544 SLC22A15Q8IZD6 547 aa8.17□□□□□ -1.1
CDC27-201ENST00000066544 BPIFB6Q8NFQ5 453 aa8.17□□□□□ -1.1
CDC27-201ENST00000066544 LKAAEAR1Q8TD35 194 aa8.17□□□□□ -1.1
CDC27-201ENST00000066544 RNF38Q9H0F5 515 aa8.17□□□□□ -1.1
CDC27-201ENST00000066544 VAPAQ9P0L0 249 aa8.17□□□□□ -1.1
CDC27-201ENST00000066544 TBKBP1A7MCY6 615 aa8.17□□□□□ -1.1
CDC27-201ENST00000066544 SH3BGRLO75368 114 aa8.17□□□□□ -1.1
CDC27-201ENST00000066544 TCF3P15923 654 aa8.17□□□□□ -1.1
CDC27-201ENST00000066544 CD247P20963 164 aa8.17□□□□□ -1.1
CDC27-201ENST00000066544 FOXD4Q12950 439 aaPredicted RBP8.17□□□□□ -1.1
CDC27-201ENST00000066544 GPR17Q13304 367 aa8.17□□□□□ -1.1
CDC27-201ENST00000066544 CPSF6Q16630 551 aaKnown RBP eCLIP8.17□□□□□ -1.1
CDC27-201ENST00000066544 TRIM71Q2Q1W2 868 aaKnown RBP8.17□□□□□ -1.1
CDC27-201ENST00000066544 LRRC73Q5JTD7 316 aa8.17□□□□□ -1.1
CDC27-201ENST00000066544 ABRAXAS1Q6UWZ7 409 aa8.17□□□□□ -1.1
CDC27-201ENST00000066544 GOLGA7Q7Z5G4 137 aa8.17□□□□□ -1.1
CDC27-201ENST00000066544 SPATA19Q7Z5L4 167 aa8.17□□□□□ -1.1
CDC27-201ENST00000066544 KRTCAP2Q8N6L1 136 aa8.17□□□□□ -1.1
CDC27-201ENST00000066544 CDC26Q8NHZ8 85 aa8.17□□□□□ -1.1
CDC27-201ENST00000066544 GFM2Q969S9 779 aaKnown RBP8.17□□□□□ -1.1
CDC27-201ENST00000066544 IFT80Q9P2H3 777 aaPredicted RBP8.17□□□□□ -1.1
CDC27-201ENST00000066544 WARS2Q9UGM6 360 aaKnown RBP8.17□□□□□ -1.1
CDC27-201ENST00000066544 UPK3BL1B0FP48 263 aa8.17□□□□□ -1.1
CDC27-201ENST00000066544 UPK3BL2E5RIL1 263 aa8.17□□□□□ -1.1
CDC27-201ENST00000066544 KCNH1O95259 989 aa8.17□□□□□ -1.1
CDC27-201ENST00000066544 S100BP04271 92 aaPredicted RBP8.17□□□□□ -1.1
CDC27-201ENST00000066544 CA8P35219 290 aa8.17□□□□□ -1.1
CDC27-201ENST00000066544 CAPGP40121 348 aa8.17□□□□□ -1.1
CDC27-201ENST00000066544 BNIP3Q12983 259 aa8.17□□□□□ -1.1
CDC27-201ENST00000066544 PHKG1Q16816 387 aa8.17□□□□□ -1.1
CDC27-201ENST00000066544 SLC36A3Q495N2 470 aa8.17□□□□□ -1.1
CDC27-201ENST00000066544 CYBRD1Q53TN4 286 aa8.17□□□□□ -1.1
CDC27-201ENST00000066544 LDLRAP1Q5SW96 308 aa8.17□□□□□ -1.1
CDC27-201ENST00000066544 INTS11Q5TA45 600 aaKnown RBP8.17□□□□□ -1.1
CDC27-201ENST00000066544 KLHL35Q6PF15 583 aa8.17□□□□□ -1.1
CDC27-201ENST00000066544 ENPP6Q6UWR7 440 aa8.17□□□□□ -1.1
CDC27-201ENST00000066544 GCNT7Q6ZNI0 430 aa8.17□□□□□ -1.1
CDC27-201ENST00000066544 ERI1Q8IV48 349 aaKnown RBP8.17□□□□□ -1.1
CDC27-201ENST00000066544 TMBIM1Q969X1 311 aa8.17□□□□□ -1.1
CDC27-201ENST00000066544 CCDC90BQ9GZT6 254 aa8.17□□□□□ -1.1
CDC27-201ENST00000066544 ASB8Q9H765 288 aa8.17□□□□□ -1.1
CDC27-201ENST00000066544 PFDN4Q9NQP4 134 aa8.17□□□□□ -1.1
CDC27-201ENST00000066544 WWOXQ9NZC7 414 aa8.17□□□□□ -1.1
CDC27-201ENST00000066544 PKD2L2Q9NZM6 624 aa8.17□□□□□ -1.1
CDC27-201ENST00000066544 PHF24Q9UPV7 400 aa8.17□□□□□ -1.1
CDC27-201ENST00000066544 ARVCFO00192 962 aa8.17□□□□□ -1.1
CDC27-201ENST00000066544 PENKP01210 267 aaPredicted RBP8.17□□□□□ -1.1
CDC27-201ENST00000066544 MYF6P23409 242 aa8.17□□□□□ -1.1
CDC27-201ENST00000066544 ZFP36L2P47974 494 aaKnown RBP8.17□□□□□ -1.1
CDC27-201ENST00000066544 CHRNB3Q05901 458 aa8.17□□□□□ -1.1
CDC27-201ENST00000066544 TNK2Q07912 1038 aa8.17□□□□□ -1.1
CDC27-201ENST00000066544 ARHGEF7Q14155 803 aa8.17□□□□□ -1.1
CDC27-201ENST00000066544 AARS2Q5JTZ9 985 aaKnown RBP8.17□□□□□ -1.1
CDC27-201ENST00000066544 SPESP1Q6UW49 350 aa8.17□□□□□ -1.1
CDC27-201ENST00000066544 GALNT7Q86SF2 657 aa8.17□□□□□ -1.1
CDC27-201ENST00000066544 HM13Q8TCT9 377 aa8.17□□□□□ -1.1
CDC27-201ENST00000066544 ULK4Q96C45 1275 aa8.17□□□□□ -1.1
CDC27-201ENST00000066544 EID2BQ96D98 161 aa8.17□□□□□ -1.1
CDC27-201ENST00000066544 ITCHQ96J02 903 aa8.17□□□□□ -1.1
CDC27-201ENST00000066544 CGREF1Q99674 301 aa8.17□□□□□ -1.1
CDC27-201ENST00000066544 ADGRE3Q9BY15 652 aa8.17□□□□□ -1.1
CDC27-201ENST00000066544 CLPBQ9H078 707 aa8.17□□□□□ -1.1
CDC27-201ENST00000066544 IKZF5Q9H5V7 419 aa8.17□□□□□ -1.1
CDC27-201ENST00000066544 RNF186Q9NXI6 227 aa8.17□□□□□ -1.1
CDC27-201ENST00000066544 AASSQ9UDR5 926 aa8.17□□□□□ -1.1
CDC27-201ENST00000066544 ABT1Q9ULW3 272 aaKnown RBP8.17□□□□□ -1.1
CDC27-201ENST00000066544 PTPRDP23468 1912 aa8.17□□□□□ -1.1
CDC27-201ENST00000066544 PTGES3LE9PB15 166 aa8.16□□□□□ -1.1
CDC27-201ENST00000066544 H0YJX3 145 aa8.16□□□□□ -1.1
CDC27-201ENST00000066544 TBL1XO60907 577 aa8.16□□□□□ -1.1
CDC27-201ENST00000066544 LRATO95237 230 aa8.16□□□□□ -1.1
CDC27-201ENST00000066544 RASAL1O95294 804 aa8.16□□□□□ -1.1
CDC27-201ENST00000066544 IGLV3-27P01718 113 aa8.16□□□□□ -1.1
CDC27-201ENST00000066544 MAGEA11P43364 429 aa8.16□□□□□ -1.1
CDC27-201ENST00000066544 ARF5P84085 180 aa8.16□□□□□ -1.1
CDC27-201ENST00000066544 RAB39AQ14964 217 aa8.16□□□□□ -1.1
CDC27-201ENST00000066544 SPANXN4Q5MJ08 99 aa8.16□□□□□ -1.1
CDC27-201ENST00000066544 HECTD3Q5T447 861 aa8.16□□□□□ -1.1
CDC27-201ENST00000066544 OGFOD2Q6N063 350 aa8.16□□□□□ -1.1
CDC27-201ENST00000066544 TBC1D21Q8IYX1 336 aa8.16□□□□□ -1.1
CDC27-201ENST00000066544 MFSD2AQ8NA29 543 aa8.16□□□□□ -1.1
CDC27-201ENST00000066544 DUS3LQ96G46 650 aaKnown RBP8.16□□□□□ -1.1
CDC27-201ENST00000066544 ACTL8Q9H568 366 aa8.16□□□□□ -1.1
CDC27-201ENST00000066544 MARCH5Q9NX47 278 aa8.16□□□□□ -1.1
CDC27-201ENST00000066544 PADI4Q9UM07 663 aa8.16□□□□□ -1.1
CDC27-201ENST00000066544 ZNF711Q9Y462 761 aa8.16□□□□□ -1.1
CDC27-201ENST00000066544 PCDHB7Q9Y5E2 793 aa8.16□□□□□ -1.1
CDC27-201ENST00000066544 NLRC5Q86WI3 1866 aa8.16□□□□□ -1.1
CDC27-201ENST00000066544 TRPM7Q96QT4 1865 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms