RNA–Protein interactions for RNA: ENST00000011700.10

VPS13D-201, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 1 (best)

Gene VPS13D, Length 10,969 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-201ENST00000011700 GAS6Q14393 721 aa6.02□□□□□ -1.45
VPS13D-201ENST00000011700 CBX2Q14781 532 aaPredicted RBP6.02□□□□□ -1.45
VPS13D-201ENST00000011700 IQCCQ4KMZ1 466 aa6.02□□□□□ -1.45
VPS13D-201ENST00000011700 GPAT3Q53EU6 434 aa6.02□□□□□ -1.45
VPS13D-201ENST00000011700 ARL9Q6T311 187 aa6.02□□□□□ -1.45
VPS13D-201ENST00000011700 TRAPPC5Q8IUR0 188 aa6.02□□□□□ -1.45
VPS13D-201ENST00000011700 ANKFN1Q8N957 763 aa6.02□□□□□ -1.45
VPS13D-201ENST00000011700 TBC1D16Q8TBP0 767 aa6.02□□□□□ -1.45
VPS13D-201ENST00000011700 SLCO2A1Q92959 643 aa6.02□□□□□ -1.45
VPS13D-201ENST00000011700 S100A16Q96FQ6 103 aaKnown RBP6.02□□□□□ -1.45
VPS13D-201ENST00000011700 TMEM121BQ9BXQ6 578 aaPredicted RBP6.02□□□□□ -1.45
VPS13D-201ENST00000011700 IRF2BPLQ9H1B7 796 aa6.02□□□□□ -1.45
VPS13D-201ENST00000011700 LRRC42Q9Y546 428 aa6.02□□□□□ -1.45
VPS13D-201ENST00000011700 HSPE1-MOB4S4R3N1 261 aa6.02□□□□□ -1.45
VPS13D-201ENST00000011700 CNOT1A5YKK6 2376 aaKnown RBP6.01□□□□□ -1.45
VPS13D-201ENST00000011700 MT-CO2P00403 227 aa6.01□□□□□ -1.45
VPS13D-201ENST00000011700 DSG2Q14126 1118 aa6.01□□□□□ -1.45
VPS13D-201ENST00000011700 SEMA3AQ14563 771 aa6.01□□□□□ -1.45
VPS13D-201ENST00000011700 FAM182AQ5T1J6 154 aa6.01□□□□□ -1.45
VPS13D-201ENST00000011700 PTAR1Q7Z6K3 402 aaPredicted RBP6.01□□□□□ -1.45
VPS13D-201ENST00000011700 ALDH16A1Q8IZ83 802 aa6.01□□□□□ -1.45
VPS13D-201ENST00000011700 C12orf50Q8NA57 414 aaPredicted RBP6.01□□□□□ -1.45
VPS13D-201ENST00000011700 NCSTNQ92542 709 aa6.01□□□□□ -1.45
VPS13D-201ENST00000011700 CXorf40BQ96DE9 158 aa6.01□□□□□ -1.45
VPS13D-201ENST00000011700 RERGLQ9H628 205 aa6.01□□□□□ -1.45
VPS13D-201ENST00000011700 LRTM1Q9HBL6 345 aa6.01□□□□□ -1.45
VPS13D-201ENST00000011700 POFUT2Q9Y2G5 429 aa6.01□□□□□ -1.45
VPS13D-201ENST00000011700 ATG4BQ9Y4P1 393 aa6.01□□□□□ -1.45
VPS13D-201ENST00000011700 WDR27A2RRH5 827 aa6.01□□□□□ -1.45
VPS13D-201ENST00000011700 NCF1BA6NI72 391 aaPredicted RBP6.01□□□□□ -1.45
VPS13D-201ENST00000011700 NCF1CA8MVU1 366 aaPredicted RBP6.01□□□□□ -1.45
VPS13D-201ENST00000011700 NCF1P14598 390 aaPredicted RBP6.01□□□□□ -1.45
VPS13D-201ENST00000011700 EPORP19235 508 aa6.01□□□□□ -1.45
VPS13D-201ENST00000011700 UGT1A3P35503 534 aa6.01□□□□□ -1.45
VPS13D-201ENST00000011700 HSD17B7P56937 341 aa6.01□□□□□ -1.45
VPS13D-201ENST00000011700 CACNG1Q06432 222 aa6.01□□□□□ -1.45
VPS13D-201ENST00000011700 NRF1Q16656 503 aa6.01□□□□□ -1.45
VPS13D-201ENST00000011700 FRMD7Q6ZUT3 714 aa6.01□□□□□ -1.45
VPS13D-201ENST00000011700 ZNF227Q86WZ6 799 aa6.01□□□□□ -1.45
VPS13D-201ENST00000011700 GID4Q8IVV7 300 aa6.01□□□□□ -1.45
VPS13D-201ENST00000011700 SPERTQ8NA61 448 aa6.01□□□□□ -1.45
VPS13D-201ENST00000011700 CEP76Q8TAP6 659 aa6.01□□□□□ -1.45
VPS13D-201ENST00000011700 BAP1Q92560 729 aa6.01□□□□□ -1.45
VPS13D-201ENST00000011700 ZBTB9Q96C00 473 aa6.01□□□□□ -1.45
VPS13D-201ENST00000011700 GAS2L1Q99501 681 aaPredicted RBP6.01□□□□□ -1.45
VPS13D-201ENST00000011700 GTPBP2Q9BX10 602 aaKnown RBP6.01□□□□□ -1.45
VPS13D-201ENST00000011700 ASB8Q9H765 288 aa6.01□□□□□ -1.45
VPS13D-201ENST00000011700 EP300Q09472 2414 aaPredicted RBP6.01□□□□□ -1.45
VPS13D-201ENST00000011700 ITGB4P16144 1822 aa6.01□□□□□ -1.45
VPS13D-201ENST00000011700 CCL15-CCL14A0A0B4J2E2 113 aa6.01□□□□□ -1.45
VPS13D-201ENST00000011700 PMM2O15305 246 aa6.01□□□□□ -1.45
VPS13D-201ENST00000011700 HSPA12AO43301 675 aa6.01□□□□□ -1.45
VPS13D-201ENST00000011700 COQ9O75208 318 aa6.01□□□□□ -1.45
VPS13D-201ENST00000011700 TRBC1P01850 177 aa6.01□□□□□ -1.45
VPS13D-201ENST00000011700 HRH2P25021 359 aa6.01□□□□□ -1.45
VPS13D-201ENST00000011700 CASRP41180 1078 aa6.01□□□□□ -1.45
VPS13D-201ENST00000011700 CCL15Q16663 113 aa6.01□□□□□ -1.45
VPS13D-201ENST00000011700 RNASEH2BQ5TBB1 312 aaKnown RBP6.01□□□□□ -1.45
VPS13D-201ENST00000011700 ABHD13Q7L211 337 aa6.01□□□□□ -1.45
VPS13D-201ENST00000011700 PLD4Q96BZ4 506 aa6.01□□□□□ -1.45
VPS13D-201ENST00000011700 TRMT13Q9NUP7 481 aaKnown RBP6.01□□□□□ -1.45
VPS13D-201ENST00000011700 CAPN6Q9Y6Q1 641 aa6.01□□□□□ -1.45
VPS13D-201ENST00000011700 KMT2EQ8IZD2 1858 aa6.01□□□□□ -1.45
VPS13D-201ENST00000011700 ESR1P03372 595 aa6.01□□□□□ -1.45
VPS13D-201ENST00000011700 PRNPP04156 253 aa6.01□□□□□ -1.45
VPS13D-201ENST00000011700 GBX2P52951 348 aaPredicted RBP6.01□□□□□ -1.45
VPS13D-201ENST00000011700 MZT1Q08AG7 82 aa6.01□□□□□ -1.45
VPS13D-201ENST00000011700 MELKQ14680 651 aa6.01□□□□□ -1.45
VPS13D-201ENST00000011700 SLC22A10Q63ZE4 541 aa6.01□□□□□ -1.45
VPS13D-201ENST00000011700 CLNKQ7Z7G1 428 aa6.01□□□□□ -1.45
VPS13D-201ENST00000011700 ZNF563Q8TA94 476 aa6.01□□□□□ -1.45
VPS13D-201ENST00000011700 ACSF2Q96CM8 615 aaPredicted RBP6.01□□□□□ -1.45
VPS13D-201ENST00000011700 ERLEC1Q96DZ1 483 aa6.01□□□□□ -1.45
VPS13D-201ENST00000011700 RNF31Q96EP0 1072 aa6.01□□□□□ -1.45
VPS13D-201ENST00000011700 PHPT1Q9NRX4 125 aaPredicted RBP6.01□□□□□ -1.45
VPS13D-201ENST00000011700 SNCAIPQ9Y6H5 919 aa6.01□□□□□ -1.45
VPS13D-201ENST00000011700 LAMB2P55268 1798 aa6.01□□□□□ -1.45
VPS13D-201ENST00000011700 SCAF4O95104 1147 aaKnown RBP6.01□□□□□ -1.45
VPS13D-201ENST00000011700 IL3P08700 152 aa6.01□□□□□ -1.45
VPS13D-201ENST00000011700 KCNA5P22460 613 aa6.01□□□□□ -1.45
VPS13D-201ENST00000011700 PTGER3P43115 390 aa6.01□□□□□ -1.45
VPS13D-201ENST00000011700 NDST2P52849 883 aa6.01□□□□□ -1.45
VPS13D-201ENST00000011700 CAV3P56539 151 aa6.01□□□□□ -1.45
VPS13D-201ENST00000011700 SLC1A5Q15758 541 aa6.01□□□□□ -1.45
VPS13D-201ENST00000011700 RTL6Q6ICC9 239 aa6.01□□□□□ -1.45
VPS13D-201ENST00000011700 PGAP1Q75T13 922 aa6.01□□□□□ -1.45
VPS13D-201ENST00000011700 GALNT12Q8IXK2 581 aa6.01□□□□□ -1.45
VPS13D-201ENST00000011700 ZSWIM2Q8NEG5 633 aa6.01□□□□□ -1.45
VPS13D-201ENST00000011700 RBM18Q96H35 190 aaKnown RBP6.01□□□□□ -1.45
VPS13D-201ENST00000011700 NECAB3Q96P71 396 aaPredicted RBP6.01□□□□□ -1.45
VPS13D-201ENST00000011700 OR52B2Q96RD2 323 aa6.01□□□□□ -1.45
VPS13D-201ENST00000011700 PBDC1Q9BVG4 233 aa6.01□□□□□ -1.45
VPS13D-201ENST00000011700 GPR88Q9GZN0 384 aa6.01□□□□□ -1.45
VPS13D-201ENST00000011700 SEMA4AQ9H3S1 761 aa6.01□□□□□ -1.45
VPS13D-201ENST00000011700 BRD9Q9H8M2 597 aa6.01□□□□□ -1.45
VPS13D-201ENST00000011700 AKAP3O75969 853 aa6.01□□□□□ -1.45
VPS13D-201ENST00000011700 RENP00797 406 aa6.01□□□□□ -1.45
VPS13D-201ENST00000011700 IFNA10P01566 189 aa6.01□□□□□ -1.45
VPS13D-201ENST00000011700 HRGP04196 525 aa6.01□□□□□ -1.45
VPS13D-201ENST00000011700 IFNA4P05014 189 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms