RNA–Protein interactions for RNA: ENSMUST00000052648.8

Ccdc28a-201, Transcript of Coiled-coil domain-containing 28A, mousemouse

TSL 1 (best) BASIC

Gene Ccdc28a, Length 2,255 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28a-201ENSMUST00000052648 Ubtfl1Q3USZ2 394 aa8.73□□□□□ -1.01
Ccdc28a-201ENSMUST00000052648 Fut10Q5F2L2 481 aa8.73□□□□□ -1.01
Ccdc28a-201ENSMUST00000052648 Atp2a3Q64518 1038 aa8.73□□□□□ -1.01
Ccdc28a-201ENSMUST00000052648 Fam149b1Q6NSV7 578 aa8.73□□□□□ -1.01
Ccdc28a-201ENSMUST00000052648 Ubtd2Q6PGH0 234 aa8.73□□□□□ -1.01
Ccdc28a-201ENSMUST00000052648 Trpm4Q7TN37 1213 aa8.73□□□□□ -1.01
Ccdc28a-201ENSMUST00000052648 Prpf38bQ80SY5 542 aaKnown RBP8.73□□□□□ -1.01
Ccdc28a-201ENSMUST00000052648 Zfp57Q8C6P8 421 aa8.73□□□□□ -1.01
Ccdc28a-201ENSMUST00000052648 Vmn1r87Q8R255 295 aa8.73□□□□□ -1.01
Ccdc28a-201ENSMUST00000052648 Dact1Q8R4A3 778 aa8.73□□□□□ -1.01
Ccdc28a-201ENSMUST00000052648 Cstf1Q99LC2 431 aaKnown RBP8.73□□□□□ -1.01
Ccdc28a-201ENSMUST00000052648 Abcf2Q99LE6 628 aaKnown RBP8.73□□□□□ -1.01
Ccdc28a-201ENSMUST00000052648 Gtf2a1Q99PM3 378 aa8.73□□□□□ -1.01
Ccdc28a-201ENSMUST00000052648 Trappc5Q9CQA1 188 aa8.73□□□□□ -1.01
Ccdc28a-201ENSMUST00000052648 Fam173bQ9D1Z3 247 aa8.73□□□□□ -1.01
Ccdc28a-201ENSMUST00000052648 Prl8a6Q9DAY2 240 aa8.73□□□□□ -1.01
Ccdc28a-201ENSMUST00000052648 Rrp8Q9DB85 457 aaKnown RBP8.73□□□□□ -1.01
Ccdc28a-201ENSMUST00000052648 FastkQ9JIX9 511 aa8.73□□□□□ -1.01
Ccdc28a-201ENSMUST00000052648 Capn15Q9JLG8 1095 aa8.73□□□□□ -1.01
Ccdc28a-201ENSMUST00000052648 Carm1Q9WVG6 608 aa8.73□□□□□ -1.01
Ccdc28a-201ENSMUST00000052648 Zbed5B2RPU8 756 aa8.73□□□□□ -1.01
Ccdc28a-201ENSMUST00000052648 Mkrn2osD3Z393 217 aa8.73□□□□□ -1.01
Ccdc28a-201ENSMUST00000052648 Gm1110F6Y113 635 aa8.73□□□□□ -1.01
Ccdc28a-201ENSMUST00000052648 Mtnd3P03899 115 aa8.73□□□□□ -1.01
Ccdc28a-201ENSMUST00000052648 SagP20443 403 aa8.73□□□□□ -1.01
Ccdc28a-201ENSMUST00000052648 Hrh1P70174 488 aa8.73□□□□□ -1.01
Ccdc28a-201ENSMUST00000052648 Surf6P70279 355 aaKnown RBP8.73□□□□□ -1.01
Ccdc28a-201ENSMUST00000052648 Cuzd1P70412 606 aa8.73□□□□□ -1.01
Ccdc28a-201ENSMUST00000052648 Cct5P80316 541 aaKnown RBP8.73□□□□□ -1.01
Ccdc28a-201ENSMUST00000052648 Hoxc4Q08624 264 aa8.73□□□□□ -1.01
Ccdc28a-201ENSMUST00000052648 Tmem120bQ3TA38 339 aa8.73□□□□□ -1.01
Ccdc28a-201ENSMUST00000052648 Gpr165Q3V3A3 455 aa8.73□□□□□ -1.01
Ccdc28a-201ENSMUST00000052648 Gm527Q4KL13 310 aa8.73□□□□□ -1.01
Ccdc28a-201ENSMUST00000052648 Slc25a51Q5HZI9 298 aa8.73□□□□□ -1.01
Ccdc28a-201ENSMUST00000052648 Havcr1Q5QNS5 305 aa8.73□□□□□ -1.01
Ccdc28a-201ENSMUST00000052648 Ptpn21Q62136 1176 aa8.73□□□□□ -1.01
Ccdc28a-201ENSMUST00000052648 Ppp2r2aQ6P1F6 447 aa8.73□□□□□ -1.01
Ccdc28a-201ENSMUST00000052648 Zic5Q7TQ40 622 aa8.73□□□□□ -1.01
Ccdc28a-201ENSMUST00000052648 Pcdh19Q80TF3 1145 aa8.73□□□□□ -1.01
Ccdc28a-201ENSMUST00000052648 SnphQ80U23 495 aa8.73□□□□□ -1.01
Ccdc28a-201ENSMUST00000052648 Ap4e1Q80V94 1122 aa8.73□□□□□ -1.01
Ccdc28a-201ENSMUST00000052648 Tmtc4Q8BG19 741 aa8.73□□□□□ -1.01
Ccdc28a-201ENSMUST00000052648 Bend5Q8C6D4 421 aa8.73□□□□□ -1.01
Ccdc28a-201ENSMUST00000052648 Rdh1Q8CGV4 317 aa8.73□□□□□ -1.01
Ccdc28a-201ENSMUST00000052648 CopaQ8CIE6 1224 aaKnown RBP8.73□□□□□ -1.01
Ccdc28a-201ENSMUST00000052648 Ints9Q8K114 658 aaKnown RBP8.73□□□□□ -1.01
Ccdc28a-201ENSMUST00000052648 OlahQ8R197 265 aa8.73□□□□□ -1.01
Ccdc28a-201ENSMUST00000052648 Pmf1Q9CPV5 202 aa8.73□□□□□ -1.01
Ccdc28a-201ENSMUST00000052648 Cmc1Q9CPZ8 106 aa8.73□□□□□ -1.01
Ccdc28a-201ENSMUST00000052648 SarnpQ9D1J3 210 aaKnown RBP8.73□□□□□ -1.01
Ccdc28a-201ENSMUST00000052648 Ccdc70Q9D9B0 223 aa8.73□□□□□ -1.01
Ccdc28a-201ENSMUST00000052648 Spry4Q9WTP2 300 aa8.73□□□□□ -1.01
Ccdc28a-201ENSMUST00000052648 Cst9Q9Z0H6 137 aa8.73□□□□□ -1.01
Ccdc28a-201ENSMUST00000052648 Cacna1cQ01815 2139 aa8.72□□□□□ -1.01
Ccdc28a-201ENSMUST00000052648 Igkv6-20A0A140T8P2 115 aa8.72□□□□□ -1.01
Ccdc28a-201ENSMUST00000052648 Olfr1160A2AVT0 319 aa8.72□□□□□ -1.01
Ccdc28a-201ENSMUST00000052648 Gm4969D3YZT1 566 aa8.72□□□□□ -1.01
Ccdc28a-201ENSMUST00000052648 Zc3h7aE9PWW6 970 aaKnown RBP8.72□□□□□ -1.01
Ccdc28a-201ENSMUST00000052648 Lrrc31F6VYM1 502 aa8.72□□□□□ -1.01
Ccdc28a-201ENSMUST00000052648 Ess2O70279 479 aa8.72□□□□□ -1.01
Ccdc28a-201ENSMUST00000052648 NagluO88325 739 aa8.72□□□□□ -1.01
Ccdc28a-201ENSMUST00000052648 WapP01173 134 aa8.72□□□□□ -1.01
Ccdc28a-201ENSMUST00000052648 JunP05627 334 aa8.72□□□□□ -1.01
Ccdc28a-201ENSMUST00000052648 Tbxa2rP30987 341 aa8.72□□□□□ -1.01
Ccdc28a-201ENSMUST00000052648 Ypel5P62700 121 aa8.72□□□□□ -1.01
Ccdc28a-201ENSMUST00000052648 Tbx4P70325 552 aa8.72□□□□□ -1.01
Ccdc28a-201ENSMUST00000052648 CtscP97821 462 aa8.72□□□□□ -1.01
Ccdc28a-201ENSMUST00000052648 ChukQ60680 745 aa8.72□□□□□ -1.01
Ccdc28a-201ENSMUST00000052648 MarcoQ60754 518 aa8.72□□□□□ -1.01
Ccdc28a-201ENSMUST00000052648 Lrrc8eQ66JT1 795 aa8.72□□□□□ -1.01
Ccdc28a-201ENSMUST00000052648 Ephx4Q6IE26 359 aa8.72□□□□□ -1.01
Ccdc28a-201ENSMUST00000052648 Tmeff1Q6PFE7 372 aa8.72□□□□□ -1.01
Ccdc28a-201ENSMUST00000052648 Sort1Q6PHU5 825 aa8.72□□□□□ -1.01
Ccdc28a-201ENSMUST00000052648 Tigd3Q7TM95 470 aa8.72□□□□□ -1.01
Ccdc28a-201ENSMUST00000052648 Olfr1505Q7TQQ2 316 aa8.72□□□□□ -1.01
Ccdc28a-201ENSMUST00000052648 Olfr299Q7TS05 330 aa8.72□□□□□ -1.01
Ccdc28a-201ENSMUST00000052648 R3hcc1lQ8BJM3 775 aaKnown RBP8.72□□□□□ -1.01
Ccdc28a-201ENSMUST00000052648 SntnQ8C9X1 147 aa8.72□□□□□ -1.01
Ccdc28a-201ENSMUST00000052648 Sugp1Q8CH02 643 aaKnown RBP8.72□□□□□ -1.01
Ccdc28a-201ENSMUST00000052648 Irf2bp1Q8R3Y8 584 aa8.72□□□□□ -1.01
Ccdc28a-201ENSMUST00000052648 Olfr806Q8VFI2 313 aa8.72□□□□□ -1.01
Ccdc28a-201ENSMUST00000052648 Pcdhb21Q91V48 774 aa8.72□□□□□ -1.01
Ccdc28a-201ENSMUST00000052648 Cd302Q9DCG2 228 aa8.72□□□□□ -1.01
Ccdc28a-201ENSMUST00000052648 PiggD3Z3Y1 983 aa8.71□□□□□ -1.01
Ccdc28a-201ENSMUST00000052648 Ccdc24E9PUW8 296 aa8.71□□□□□ -1.01
Ccdc28a-201ENSMUST00000052648 Olfr620E9PZ66 313 aa8.71□□□□□ -1.01
Ccdc28a-201ENSMUST00000052648 Rnf169E9Q7F2 694 aa8.71□□□□□ -1.01
Ccdc28a-201ENSMUST00000052648 Olfr726E9Q8X3 321 aa8.71□□□□□ -1.01
Ccdc28a-201ENSMUST00000052648 Obox5G3X9P6 291 aa8.71□□□□□ -1.01
Ccdc28a-201ENSMUST00000052648 Olfr319L7MTY4 306 aa8.71□□□□□ -1.01
Ccdc28a-201ENSMUST00000052648 Serpinb6bO08804 377 aa8.71□□□□□ -1.01
Ccdc28a-201ENSMUST00000052648 Art2bO35975 289 aa8.71□□□□□ -1.01
Ccdc28a-201ENSMUST00000052648 MpoP11247 718 aa8.71□□□□□ -1.01
Ccdc28a-201ENSMUST00000052648 Ces1cP23953 554 aa8.71□□□□□ -1.01
Ccdc28a-201ENSMUST00000052648 Tbx1P70323 479 aa8.71□□□□□ -1.01
Ccdc28a-201ENSMUST00000052648 Olfr725Q05A45 321 aa8.71□□□□□ -1.01
Ccdc28a-201ENSMUST00000052648 Meaf6Q2VPQ9 191 aa8.71□□□□□ -1.01
Ccdc28a-201ENSMUST00000052648 CtrcQ3SYP2 268 aa8.71□□□□□ -1.01
Ccdc28a-201ENSMUST00000052648 Vat1Q62465 406 aa8.71□□□□□ -1.01
Ccdc28a-201ENSMUST00000052648 Sf1Q64213 653 aaKnown RBP8.71□□□□□ -1.01
Retrieved 100 of 22,080 RNA–protein pairs in 17.6 ms