RNA–Protein interactions for RNA: ENSMUST00000035935.8

Ccdc40-201, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc40, Length 4,979 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-201ENSMUST00000035935 Clec2lP0C7M9 211 aa10.18□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Svs4P18419 113 aa10.18□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Nr5a2P45448 560 aa10.18□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Capza2P47754 286 aa10.18□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Aqp4P55088 323 aa10.18□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Htr4P97288 388 aa10.18□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Npy2rP97295 381 aa10.18□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 H2-M3Q31093 336 aa10.18□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Fam169aQ5XG69 665 aa10.18□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Got1l1Q7TSV6 404 aa10.18□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Aldh3b1Q80VQ0 468 aa10.18□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Rap2aQ80ZJ1 183 aa10.18□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Arl5aQ80ZU0 179 aa10.18□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Pxylp1Q8BHA9 480 aa10.18□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Asb14Q8C6Y6 587 aa10.18□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 AclyQ91V92 1091 aaKnown RBP10.18□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Cby3Q9CVN6 235 aa10.18□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Fam122aQ9DB52 284 aa10.18□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Chrac1Q9JKP8 129 aa10.18□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Ing1Q9QXV3 279 aa10.18□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Slc28a1E9PXX9 648 aa10.18□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Vmn2r14E9Q759 848 aa10.18□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Gm28048F7BCN0 99 aa10.18□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Pik3c3Q6PF93 887 aa10.18□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Hspbap1Q8BK58 483 aa10.18□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Tmem161aQ8VCA6 480 aa10.18□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Chchd6Q91VN4 273 aa10.18□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Slco1a5Q91YY5 670 aa10.18□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Rin1Q921Q7 763 aa10.18□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Ctu1Q99J10 420 aa10.18□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 MlycdQ99J39 492 aa10.18□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Nck1Q99M51 377 aa10.18□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 TympQ99N42 471 aa10.18□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Hnrnpa0Q9CX86 305 aaKnown RBP10.18□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Fzd9Q9R216 592 aa10.18□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 VarsQ9Z1Q9 1263 aaKnown RBP10.18□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 A0A1L1ST33 502 aa10.18□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Fbxo47A2A6H3 451 aa10.18□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Tubb1A2AQ07 451 aa10.18□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Pex10B1AUE5 324 aa10.18□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Zfr2E9Q5M4 874 aa10.18□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Gp5O08742 567 aa10.18□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Akap3O88987 864 aa10.18□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Lad1P57016 528 aa10.18□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 CtscP97821 462 aa10.18□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Pik3r3Q64143 461 aa10.18□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Colgalt2Q6NVG7 625 aa10.18□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Tgm6Q8BM11 706 aa10.18□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Fignl1Q8BPY9 683 aa10.18□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 OsgepQ8BWU5 335 aa10.18□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Slco6c1Q8C0X7 706 aa10.18□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Slc46a2Q8CA03 479 aa10.18□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Lrif1Q8CDD9 755 aa10.18□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Tab1Q8CF89 502 aa10.18□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 ItpkaQ8R071 459 aa10.18□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Mtmr14Q8VEL2 648 aa10.18□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Lpin3Q99PI4 848 aa10.18□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Ssr2Q9CPW5 183 aa10.18□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Gkn2Q9CQS6 184 aa10.18□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Sesn3Q9CYP7 492 aa10.18□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Nmnat1Q9EPA7 285 aa10.18□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Lipo4D3Z608 396 aa10.18□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Gm10719E9Q7T3 227 aa10.18□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Ltb4rO88855 351 aa10.18□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Ruvbl1P60122 456 aaKnown RBP10.18□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Prom2Q3UUY6 835 aa10.18□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Slc25a51Q5HZI9 298 aa10.18□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Brsk2Q69Z98 735 aa10.18□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Lix1Q6P566 282 aa10.18□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Cd300aQ6SJQ0 318 aa10.18□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Gpc2Q8BKV1 579 aa10.18□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Trmt10aQ8C1Z8 328 aaKnown RBP10.18□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Rcor1Q8CFE3 480 aa10.18□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Tmcc3Q8R310 477 aa10.18□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 HnrnpabQ99020 285 aaKnown RBP10.18□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Fcf1Q9CTH6 198 aa10.18□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Mcm8Q9CWV1 833 aa10.18□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Zfp623Q9CY99 499 aa10.18□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Cops7aQ9CZ04 275 aa10.18□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Oser1Q9D722 291 aa10.18□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 UqcrbQ9D855 111 aa10.18□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 TheglQ9DA15 459 aa10.18□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Nrp2O35375 931 aa10.17□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Pdcd5P56812 126 aa10.17□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Ncf4P97369 339 aa10.17□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 StimateQ3UF25 288 aa10.17□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Trpc5osQ3UHV4 110 aa10.17□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 CltbQ6IRU5 229 aaKnown RBP10.17□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Txndc15Q6P6J9 344 aa10.17□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Zic5Q7TQ40 622 aa10.17□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Olfr1037Q7TR84 321 aa10.17□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 1700001J03RikQ80ZR8 219 aa10.17□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Casp9Q8C3Q9 454 aa10.17□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Gm5591Q8CDK1 855 aa10.17□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Plac9Q8K262 108 aa10.17□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Wrnip1Q91XU0 660 aa10.17□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Gadd45gip1Q9CR59 222 aa10.17□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Tdrd12Q9CWU0 1215 aa10.17□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 CercamA3KGW5 592 aa10.17□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 5830411N06RikB3F5L4 1112 aa10.17□□□□□ -0.78
Retrieved 100 of 22,080 RNA–protein pairs in 21.3 ms