RNA–Protein interactions for RNA: ENSMUST00000035283.10

Nup88-201, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,450 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-201ENSMUST00000035283 Kcnj2P35561 428 aa13.27□□□□□ -0.29
Nup88-201ENSMUST00000035283 Timm13P62075 95 aa13.27□□□□□ -0.29
Nup88-201ENSMUST00000035283 Kcnab2P62482 367 aa13.27□□□□□ -0.29
Nup88-201ENSMUST00000035283 Il11ra2P70225 432 aa13.27□□□□□ -0.29
Nup88-201ENSMUST00000035283 Smpd1Q04519 627 aa13.27□□□□□ -0.29
Nup88-201ENSMUST00000035283 Itgb8Q0VBD0 767 aa13.27□□□□□ -0.29
Nup88-201ENSMUST00000035283 Smim24Q0VG18 120 aa13.27□□□□□ -0.29
Nup88-201ENSMUST00000035283 Ms4a15Q3UPL6 245 aa13.27□□□□□ -0.29
Nup88-201ENSMUST00000035283 Plk5Q4FZD7 595 aa13.27□□□□□ -0.29
Nup88-201ENSMUST00000035283 Gngt2Q61017 69 aa13.27□□□□□ -0.29
Nup88-201ENSMUST00000035283 Cntn2Q61330 1040 aa13.27□□□□□ -0.29
Nup88-201ENSMUST00000035283 Wnt8aQ64527 354 aa13.27□□□□□ -0.29
Nup88-201ENSMUST00000035283 Txndc15Q6P6J9 344 aa13.27□□□□□ -0.29
Nup88-201ENSMUST00000035283 Tdpoz3Q717B4 365 aa13.27□□□□□ -0.29
Nup88-201ENSMUST00000035283 Olfr814Q7TRH4 310 aa13.27□□□□□ -0.29
Nup88-201ENSMUST00000035283 Q8BHR8 331 aa13.27□□□□□ -0.29
Nup88-201ENSMUST00000035283 Slco2b1Q8BXB6 683 aa13.27□□□□□ -0.29
Nup88-201ENSMUST00000035283 Kcnv1Q8BZN2 503 aa13.27□□□□□ -0.29
Nup88-201ENSMUST00000035283 Nuak2Q8BZN4 639 aa13.27□□□□□ -0.29
Nup88-201ENSMUST00000035283 Smoc2Q8CD91 447 aa13.27□□□□□ -0.29
Nup88-201ENSMUST00000035283 Hacd3Q8K2C9 362 aa13.27□□□□□ -0.29
Nup88-201ENSMUST00000035283 Lrrc56Q8K375 552 aa13.27□□□□□ -0.29
Nup88-201ENSMUST00000035283 Zdhhc12Q8VC90 267 aa13.27□□□□□ -0.29
Nup88-201ENSMUST00000035283 Olfr806Q8VFI2 313 aa13.27□□□□□ -0.29
Nup88-201ENSMUST00000035283 Prmt3Q922H1 532 aa13.27□□□□□ -0.29
Nup88-201ENSMUST00000035283 Chid1Q922Q9 393 aa13.27□□□□□ -0.29
Nup88-201ENSMUST00000035283 CatsperzQ9CQP8 194 aa13.27□□□□□ -0.29
Nup88-201ENSMUST00000035283 Dnajb4Q9D832 337 aa13.27□□□□□ -0.29
Nup88-201ENSMUST00000035283 IgtpQ9DCE9 423 aa13.27□□□□□ -0.29
Nup88-201ENSMUST00000035283 NbnQ9R207 751 aa13.27□□□□□ -0.29
Nup88-201ENSMUST00000035283 Igkv5-45A0A0B4J1J1 115 aa13.27□□□□□ -0.29
Nup88-201ENSMUST00000035283 Zscan5bB2RTN3 468 aa13.27□□□□□ -0.29
Nup88-201ENSMUST00000035283 Olfr376E9Q4M1 320 aa13.27□□□□□ -0.29
Nup88-201ENSMUST00000035283 Spdye4cI6XKQ3 339 aa13.27□□□□□ -0.29
Nup88-201ENSMUST00000035283 Hk2O08528 917 aaKnown RBP13.27□□□□□ -0.29
Nup88-201ENSMUST00000035283 Sdc4O35988 198 aaKnown RBP13.27□□□□□ -0.29
Nup88-201ENSMUST00000035283 Znf143O70230 638 aa13.27□□□□□ -0.29
Nup88-201ENSMUST00000035283 Matn4O89029 624 aa13.27□□□□□ -0.29
Nup88-201ENSMUST00000035283 C2P21180 760 aa13.27□□□□□ -0.29
Nup88-201ENSMUST00000035283 S100a9P31725 113 aa13.27□□□□□ -0.29
Nup88-201ENSMUST00000035283 Acvr1P37172 509 aa13.27□□□□□ -0.29
Nup88-201ENSMUST00000035283 Igfbp4P47879 254 aa13.27□□□□□ -0.29
Nup88-201ENSMUST00000035283 Gadd45aP48316 165 aa13.27□□□□□ -0.29
Nup88-201ENSMUST00000035283 Muc1Q02496 630 aa13.27□□□□□ -0.29
Nup88-201ENSMUST00000035283 SPINDOCQ05AH6 381 aa13.27□□□□□ -0.29
Nup88-201ENSMUST00000035283 SbplQ3TUY3 232 aa13.27□□□□□ -0.29
Nup88-201ENSMUST00000035283 Tnks2Q3UES3 1166 aa13.27□□□□□ -0.29
Nup88-201ENSMUST00000035283 Hephl1Q3V1H3 1159 aa13.27□□□□□ -0.29
Nup88-201ENSMUST00000035283 Cnih3Q6ZWS4 160 aa13.27□□□□□ -0.29
Nup88-201ENSMUST00000035283 Prap1Q80XD8 149 aa13.27□□□□□ -0.29
Nup88-201ENSMUST00000035283 Zfp719Q8BIV1 735 aa13.27□□□□□ -0.29
Nup88-201ENSMUST00000035283 Ctxn3Q8BXZ0 80 aa13.27□□□□□ -0.29
Nup88-201ENSMUST00000035283 Pnpla8Q8K1N1 776 aa13.27□□□□□ -0.29
Nup88-201ENSMUST00000035283 Ca9Q8VHB5 437 aa13.27□□□□□ -0.29
Nup88-201ENSMUST00000035283 AassQ99K67 926 aa13.27□□□□□ -0.29
Nup88-201ENSMUST00000035283 Mrps18bQ99N84 254 aa13.27□□□□□ -0.29
Nup88-201ENSMUST00000035283 LrgukQ9D5S7 820 aa13.27□□□□□ -0.29
Nup88-201ENSMUST00000035283 Slco6d1Q9D5W6 683 aa13.27□□□□□ -0.29
Nup88-201ENSMUST00000035283 Haus5Q9D786 619 aa13.27□□□□□ -0.29
Nup88-201ENSMUST00000035283 PgcQ9D7R7 392 aa13.27□□□□□ -0.29
Nup88-201ENSMUST00000035283 TrmuQ9DAT5 417 aa13.27□□□□□ -0.29
Nup88-201ENSMUST00000035283 VapaQ9WV55 249 aaKnown RBP13.27□□□□□ -0.29
Nup88-201ENSMUST00000035283 Smim17A0A504 109 aa13.26□□□□□ -0.29
Nup88-201ENSMUST00000035283 Aldoart2A6ZI47 364 aa13.26□□□□□ -0.29
Nup88-201ENSMUST00000035283 Fam124aD3Z5V4 536 aa13.26□□□□□ -0.29
Nup88-201ENSMUST00000035283 Dthd1E9PZX1 795 aa13.26□□□□□ -0.29
Nup88-201ENSMUST00000035283 Vmn1r238E9Q373 306 aa13.26□□□□□ -0.29
Nup88-201ENSMUST00000035283 Vmn2r31L7N1Z4 861 aa13.26□□□□□ -0.29
Nup88-201ENSMUST00000035283 Nrp2O35375 931 aa13.26□□□□□ -0.29
Nup88-201ENSMUST00000035283 Lhx3P50481 400 aa13.26□□□□□ -0.29
Nup88-201ENSMUST00000035283 Hdac2P70288 488 aa13.26□□□□□ -0.29
Nup88-201ENSMUST00000035283 KdsrQ6GV12 332 aa13.26□□□□□ -0.29
Nup88-201ENSMUST00000035283 RbfaQ6P3B9 350 aa13.26□□□□□ -0.29
Nup88-201ENSMUST00000035283 LdahQ8BVA5 326 aa13.26□□□□□ -0.29
Nup88-201ENSMUST00000035283 Hmgcll1Q8JZS7 343 aa13.26□□□□□ -0.29
Nup88-201ENSMUST00000035283 Olfr575Q8VH16 318 aa13.26□□□□□ -0.29
Nup88-201ENSMUST00000035283 Pcdhb21Q91V48 774 aa13.26□□□□□ -0.29
Nup88-201ENSMUST00000035283 Cers2Q924Z4 380 aa13.26□□□□□ -0.29
Nup88-201ENSMUST00000035283 Q9CXL3 195 aa13.26□□□□□ -0.29
Nup88-201ENSMUST00000035283 Tpd52l2Q9CYZ2 220 aaKnown RBP13.26□□□□□ -0.29
Nup88-201ENSMUST00000035283 Tmed10Q9D1D4 219 aaKnown RBP13.26□□□□□ -0.29
Nup88-201ENSMUST00000035283 Efhd2Q9D8Y0 240 aaKnown RBP13.26□□□□□ -0.29
Nup88-201ENSMUST00000035283 Tmprss6Q9DBI0 811 aa13.26□□□□□ -0.29
Nup88-201ENSMUST00000035283 Tlr6Q9EPW9 795 aa13.26□□□□□ -0.29
Nup88-201ENSMUST00000035283 Gm30302A0A1Y7VN40 1110 aa13.25□□□□□ -0.29
Nup88-201ENSMUST00000035283 Cyp4a12bA2A974 508 aa13.25□□□□□ -0.29
Nup88-201ENSMUST00000035283 Syndig1A2ANU3 258 aa13.25□□□□□ -0.29
Nup88-201ENSMUST00000035283 Phf11cB4XVP9 339 aa13.25□□□□□ -0.29
Nup88-201ENSMUST00000035283 Zfr2E9Q5M4 874 aa13.25□□□□□ -0.29
Nup88-201ENSMUST00000035283 Gm6502L7N456 481 aa13.25□□□□□ -0.29
Nup88-201ENSMUST00000035283 E2f3O35261 457 aa13.25□□□□□ -0.29
Nup88-201ENSMUST00000035283 AldocP05063 363 aa13.25□□□□□ -0.29
Nup88-201ENSMUST00000035283 Fth1P09528 182 aa13.25□□□□□ -0.29
Nup88-201ENSMUST00000035283 Cdc25bP30306 576 aa13.25□□□□□ -0.29
Nup88-201ENSMUST00000035283 Inpp1P49442 396 aa13.25□□□□□ -0.29
Nup88-201ENSMUST00000035283 MitfQ08874 526 aa13.25□□□□□ -0.29
Nup88-201ENSMUST00000035283 Q3KNL4 93 aa13.25□□□□□ -0.29
Nup88-201ENSMUST00000035283 CenplQ3U3S3 329 aa13.25□□□□□ -0.29
Nup88-201ENSMUST00000035283 Zyg11bQ3UFS0 744 aa13.25□□□□□ -0.29
Nup88-201ENSMUST00000035283 LchnQ3UHG7 455 aa13.25□□□□□ -0.29
Retrieved 100 of 22,080 RNA–protein pairs in 70.6 ms