RNA–Protein interactions for RNA: ENSMUST00000030992.12

Rnf4-201, Transcript of E3 ubiquitin-protein ligase RNF4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf4, Length 2,895 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4-201ENSMUST00000030992 Fkbp7O54998 218 aa12.54□□□□□ -0.4
Rnf4-201ENSMUST00000030992 JunP05627 334 aa12.54□□□□□ -0.4
Rnf4-201ENSMUST00000030992 Hoxa9P09631 271 aa12.54□□□□□ -0.4
Rnf4-201ENSMUST00000030992 JundP15066 341 aa12.54□□□□□ -0.4
Rnf4-201ENSMUST00000030992 Cct8P42932 548 aa12.54□□□□□ -0.4
Rnf4-201ENSMUST00000030992 Trpv5P69744 723 aa12.54□□□□□ -0.4
Rnf4-201ENSMUST00000030992 Il11ra2P70225 432 aa12.54□□□□□ -0.4
Rnf4-201ENSMUST00000030992 Kcna5Q61762 602 aa12.54□□□□□ -0.4
Rnf4-201ENSMUST00000030992 Itln1bQ80ZA0 313 aa12.54□□□□□ -0.4
Rnf4-201ENSMUST00000030992 Ppp1r1cQ8BKK4 108 aa12.54□□□□□ -0.4
Rnf4-201ENSMUST00000030992 Prdm8Q8BZ97 687 aa12.54□□□□□ -0.4
Rnf4-201ENSMUST00000030992 Atxn7l2Q8C8K6 696 aa12.54□□□□□ -0.4
Rnf4-201ENSMUST00000030992 Rab36Q8CAM5 267 aa12.54□□□□□ -0.4
Rnf4-201ENSMUST00000030992 Fbxo48Q8CAT8 161 aa12.54□□□□□ -0.4
Rnf4-201ENSMUST00000030992 Olfr448Q8VES9 310 aa12.54□□□□□ -0.4
Rnf4-201ENSMUST00000030992 GatmQ9D964 423 aaKnown RBP12.54□□□□□ -0.4
Rnf4-201ENSMUST00000030992 TesclQ9DAJ7 231 aa12.54□□□□□ -0.4
Rnf4-201ENSMUST00000030992 PyglQ9ET01 850 aa12.54□□□□□ -0.4
Rnf4-201ENSMUST00000030992 Pkp3Q9QY23 797 aa12.54□□□□□ -0.4
Rnf4-201ENSMUST00000030992 Gm42688A0A0R3P9D1 673 aa12.54□□□□□ -0.4
Rnf4-201ENSMUST00000030992 Pnldc1B2RXZ1 531 aa12.54□□□□□ -0.4
Rnf4-201ENSMUST00000030992 Fam151bD3YUE4 279 aa12.54□□□□□ -0.4
Rnf4-201ENSMUST00000030992 RbpjlO08674 515 aa12.54□□□□□ -0.4
Rnf4-201ENSMUST00000030992 Matn4O89029 624 aa12.54□□□□□ -0.4
Rnf4-201ENSMUST00000030992 Ptger3P30557 365 aa12.54□□□□□ -0.4
Rnf4-201ENSMUST00000030992 CskP41241 450 aa12.54□□□□□ -0.4
Rnf4-201ENSMUST00000030992 PgfP49764 158 aa12.54□□□□□ -0.4
Rnf4-201ENSMUST00000030992 Hspa8P63017 646 aaKnown RBP12.54□□□□□ -0.4
Rnf4-201ENSMUST00000030992 HdxQ14B70 692 aa12.54□□□□□ -0.4
Rnf4-201ENSMUST00000030992 Tmem173Q3TBT3 378 aa12.54□□□□□ -0.4
Rnf4-201ENSMUST00000030992 Tfap2cQ61312 449 aa12.54□□□□□ -0.4
Rnf4-201ENSMUST00000030992 MslnQ61468 625 aa12.54□□□□□ -0.4
Rnf4-201ENSMUST00000030992 StgQ8BM15 349 aa12.54□□□□□ -0.4
Rnf4-201ENSMUST00000030992 Rmdn2Q8BSE0 410 aa12.54□□□□□ -0.4
Rnf4-201ENSMUST00000030992 Ccdc142Q8CAI1 738 aa12.54□□□□□ -0.4
Rnf4-201ENSMUST00000030992 Cys1Q8R4T1 145 aa12.54□□□□□ -0.4
Rnf4-201ENSMUST00000030992 Plekha4Q8VC98 588 aa12.54□□□□□ -0.4
Rnf4-201ENSMUST00000030992 Golga7Q91W53 137 aa12.54□□□□□ -0.4
Rnf4-201ENSMUST00000030992 Mlf2Q99KX1 247 aa12.54□□□□□ -0.4
Rnf4-201ENSMUST00000030992 Gstt3Q99L20 241 aa12.54□□□□□ -0.4
Rnf4-201ENSMUST00000030992 Scd3Q99PL7 359 aa12.54□□□□□ -0.4
Rnf4-201ENSMUST00000030992 Kif19Q99PT9 997 aa12.54□□□□□ -0.4
Rnf4-201ENSMUST00000030992 RhoaQ9QUI0 193 aa12.54□□□□□ -0.4
Rnf4-201ENSMUST00000030992 Sae1Q9R1T2 350 aa12.54□□□□□ -0.4
Rnf4-201ENSMUST00000030992 Vmn1r49Q9WUF1 310 aa12.54□□□□□ -0.4
Rnf4-201ENSMUST00000030992 Sppl2cA2A6C4 690 aa12.53□□□□□ -0.4
Rnf4-201ENSMUST00000030992 Cylc2B1AWN8 422 aa12.53□□□□□ -0.4
Rnf4-201ENSMUST00000030992 Prrt4B2RU40 902 aa12.53□□□□□ -0.4
Rnf4-201ENSMUST00000030992 Tsc22d2E9Q7M2 769 aa12.53□□□□□ -0.4
Rnf4-201ENSMUST00000030992 F830016B08RikG3UWE2 416 aa12.53□□□□□ -0.4
Rnf4-201ENSMUST00000030992 Cd160O88875 185 aa12.53□□□□□ -0.4
Rnf4-201ENSMUST00000030992 P04213 122 aa12.53□□□□□ -0.4
Rnf4-201ENSMUST00000030992 Msr1P30204 458 aaKnown RBP12.53□□□□□ -0.4
Rnf4-201ENSMUST00000030992 Pxmp2P42925 194 aa12.53□□□□□ -0.4
Rnf4-201ENSMUST00000030992 Ctps1P70698 591 aa12.53□□□□□ -0.4
Rnf4-201ENSMUST00000030992 VegfcP97953 415 aa12.53□□□□□ -0.4
Rnf4-201ENSMUST00000030992 Hk3Q3TRM8 922 aa12.53□□□□□ -0.4
Rnf4-201ENSMUST00000030992 Syt14Q7TN84 555 aa12.53□□□□□ -0.4
Rnf4-201ENSMUST00000030992 PdprQ7TSQ8 878 aa12.53□□□□□ -0.4
Rnf4-201ENSMUST00000030992 Prickle2Q80Y24 845 aa12.53□□□□□ -0.4
Rnf4-201ENSMUST00000030992 Q810N5 247 aa12.53□□□□□ -0.4
Rnf4-201ENSMUST00000030992 Olfm2Q8BM13 448 aa12.53□□□□□ -0.4
Rnf4-201ENSMUST00000030992 Rdh12Q8BYK4 316 aa12.53□□□□□ -0.4
Rnf4-201ENSMUST00000030992 TiparpQ8C1B2 657 aa12.53□□□□□ -0.4
Rnf4-201ENSMUST00000030992 Sirt5Q8K2C6 310 aa12.53□□□□□ -0.4
Rnf4-201ENSMUST00000030992 Ssh3Q8K330 649 aa12.53□□□□□ -0.4
Rnf4-201ENSMUST00000030992 Ntmt1Q8R2U4 223 aa12.53□□□□□ -0.4
Rnf4-201ENSMUST00000030992 Lsm1Q8VC85 133 aa12.53□□□□□ -0.4
Rnf4-201ENSMUST00000030992 Olfr1353Q8VGU8 309 aa12.53□□□□□ -0.4
Rnf4-201ENSMUST00000030992 Olfr606Q8VGZ8 319 aa12.53□□□□□ -0.4
Rnf4-201ENSMUST00000030992 Adgrl4Q923X1 739 aa12.53□□□□□ -0.4
Rnf4-201ENSMUST00000030992 Nmnat1Q9EPA7 285 aa12.53□□□□□ -0.4
Rnf4-201ENSMUST00000030992 Mmp19Q9JHI0 527 aa12.53□□□□□ -0.4
Rnf4-201ENSMUST00000030992 SelenovD3YXG1 328 aa12.53□□□□□ -0.4
Rnf4-201ENSMUST00000030992 Rgs2O08849 211 aa12.53□□□□□ -0.4
Rnf4-201ENSMUST00000030992 Ifngr1P15261 477 aa12.53□□□□□ -0.4
Rnf4-201ENSMUST00000030992 Cyr61P18406 379 aa12.53□□□□□ -0.4
Rnf4-201ENSMUST00000030992 CryaaP24622 196 aa12.53□□□□□ -0.4
Rnf4-201ENSMUST00000030992 Ap1s1P61967 158 aa12.53□□□□□ -0.4
Rnf4-201ENSMUST00000030992 Nr1h2Q60644 446 aa12.53□□□□□ -0.4
Rnf4-201ENSMUST00000030992 Ints6Q6PCM2 883 aa12.53□□□□□ -0.4
Rnf4-201ENSMUST00000030992 D3Ertd751eQ8BGN2 192 aa12.53□□□□□ -0.4
Rnf4-201ENSMUST00000030992 Shc2Q8BMC3 573 aa12.53□□□□□ -0.4
Rnf4-201ENSMUST00000030992 Smad3Q8BUN5 425 aa12.53□□□□□ -0.4
Rnf4-201ENSMUST00000030992 Camk1dQ8BW96 385 aa12.53□□□□□ -0.4
Rnf4-201ENSMUST00000030992 Sec22cQ8BXT9 303 aa12.53□□□□□ -0.4
Rnf4-201ENSMUST00000030992 Thop1Q8C1A5 687 aaKnown RBP12.53□□□□□ -0.4
Rnf4-201ENSMUST00000030992 Olfr697Q8VFM4 317 aa12.53□□□□□ -0.4
Rnf4-201ENSMUST00000030992 Ndufs1Q91VD9 727 aaKnown RBP12.53□□□□□ -0.4
Rnf4-201ENSMUST00000030992 Ptbp2Q91Z31 531 aaKnown RBP12.53□□□□□ -0.4
Rnf4-201ENSMUST00000030992 Nif3l1Q9EQ80 376 aa12.53□□□□□ -0.4
Rnf4-201ENSMUST00000030992 Obsl1D3YYU8 1804 aaKnown RBP12.53□□□□□ -0.4
Rnf4-201ENSMUST00000030992 A6H6Q4 206 aa12.52□□□□□ -0.4
Rnf4-201ENSMUST00000030992 Catsperg2C6KI89 1145 aa12.52□□□□□ -0.4
Rnf4-201ENSMUST00000030992 Kbtbd6E9PYD7 486 aa12.52□□□□□ -0.4
Rnf4-201ENSMUST00000030992 Kbtbd7G5E8C2 690 aa12.52□□□□□ -0.4
Rnf4-201ENSMUST00000030992 Sod3O09164 251 aa12.52□□□□□ -0.4
Rnf4-201ENSMUST00000030992 Smad6O35182 495 aa12.52□□□□□ -0.4
Rnf4-201ENSMUST00000030992 ApoeP08226 311 aa12.52□□□□□ -0.4
Rnf4-201ENSMUST00000030992 Gli1P47806 1111 aa12.52□□□□□ -0.4
Retrieved 100 of 22,080 RNA–protein pairs in 29.5 ms