RNA–Protein interactions for RNA: ENST00000642021.1

PHGDH-233, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,794 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-233ENST00000642021 ANKRD34AQ69YU3 496 aa13.66□□□□□ -0.22
PHGDH-233ENST00000642021 ALG1LQ6GMV1 187 aa13.66□□□□□ -0.22
PHGDH-233ENST00000642021 AFTPHQ6ULP2 937 aa13.66□□□□□ -0.22
PHGDH-233ENST00000642021 GPSM1Q86YR5 675 aa13.66□□□□□ -0.22
PHGDH-233ENST00000642021 CROCCP3Q8IVE0 287 aa13.66□□□□□ -0.22
PHGDH-233ENST00000642021 COLGALT2Q8IYK4 626 aa13.66□□□□□ -0.22
PHGDH-233ENST00000642021 NKAPQ8N5F7 415 aaKnown RBP13.66□□□□□ -0.22
PHGDH-233ENST00000642021 TMBIM1Q969X1 311 aa13.66□□□□□ -0.22
PHGDH-233ENST00000642021 BDH2Q9BUT1 245 aa13.66□□□□□ -0.22
PHGDH-233ENST00000642021 SARS2Q9NP81 518 aaKnown RBP13.66□□□□□ -0.22
PHGDH-233ENST00000642021 PKD2L2Q9NZM6 624 aa13.66□□□□□ -0.22
PHGDH-233ENST00000642021 HTTP42858 3142 aa13.66□□□□□ -0.22
PHGDH-233ENST00000642021 TYW5A2RUC4 315 aaKnown RBP13.66□□□□□ -0.22
PHGDH-233ENST00000642021 GLTPD2A6NH11 291 aa13.66□□□□□ -0.22
PHGDH-233ENST00000642021 TRIM64BA6NI03 449 aa13.66□□□□□ -0.22
PHGDH-233ENST00000642021 CAPN1P07384 714 aa13.66□□□□□ -0.22
PHGDH-233ENST00000642021 HNRNPCP07910 306 aaKnown RBP eCLIP13.66□□□□□ -0.22
PHGDH-233ENST00000642021 INHBBP09529 407 aa13.66□□□□□ -0.22
PHGDH-233ENST00000642021 CTGFP29279 349 aa13.66□□□□□ -0.22
PHGDH-233ENST00000642021 MAPKAPK2P49137 400 aa13.66□□□□□ -0.22
PHGDH-233ENST00000642021 NFE2Q16621 373 aaPredicted RBP13.66□□□□□ -0.22
PHGDH-233ENST00000642021 PROSER1Q86XN7 944 aa13.66□□□□□ -0.22
PHGDH-233ENST00000642021 SMYD1Q8NB12 490 aa13.66□□□□□ -0.22
PHGDH-233ENST00000642021 TTC16Q8NEE8 873 aa13.66□□□□□ -0.22
PHGDH-233ENST00000642021 C8orf4Q9NR00 106 aa13.66□□□□□ -0.22
PHGDH-233ENST00000642021 FAIMQ9NVQ4 179 aa13.66□□□□□ -0.22
PHGDH-233ENST00000642021 UTS2RQ9UKP6 389 aa13.66□□□□□ -0.22
PHGDH-233ENST00000642021 PCDHB5Q9Y5E4 795 aa13.66□□□□□ -0.22
PHGDH-233ENST00000642021 TSPAN3O60637 253 aa13.65□□□□□ -0.22
PHGDH-233ENST00000642021 ALBP02768 609 aa13.65□□□□□ -0.22
PHGDH-233ENST00000642021 EEF1B2P24534 225 aaKnown RBP13.65□□□□□ -0.22
PHGDH-233ENST00000642021 MC4RP32245 332 aa13.65□□□□□ -0.22
PHGDH-233ENST00000642021 ARL1P40616 181 aaPredicted RBP13.65□□□□□ -0.22
PHGDH-233ENST00000642021 TGFBIQ15582 683 aa13.65□□□□□ -0.22
PHGDH-233ENST00000642021 ATP6AP1LQ52LC2 224 aa13.65□□□□□ -0.22
PHGDH-233ENST00000642021 RFTN2Q52LD8 501 aaPredicted RBP13.65□□□□□ -0.22
PHGDH-233ENST00000642021 CLLU1OSQ5K130 101 aa13.65□□□□□ -0.22
PHGDH-233ENST00000642021 ANKRD26P1Q6NSI1 321 aa13.65□□□□□ -0.22
PHGDH-233ENST00000642021 ZC3H7AQ8IWR0 971 aaKnown RBP13.65□□□□□ -0.22
PHGDH-233ENST00000642021 DPP10Q8N608 796 aa13.65□□□□□ -0.22
PHGDH-233ENST00000642021 GIPC3Q8TF64 312 aa13.65□□□□□ -0.22
PHGDH-233ENST00000642021 OSCP1Q8WVF1 389 aa13.65□□□□□ -0.22
PHGDH-233ENST00000642021 ZNF510Q9Y2H8 683 aa13.65□□□□□ -0.22
PHGDH-233ENST00000642021 PCDHB3Q9Y5E6 796 aa13.65□□□□□ -0.22
PHGDH-233ENST00000642021 MOXD2PA6NHM9 499 aa13.65□□□□□ -0.22
PHGDH-233ENST00000642021 ANKRD28O15084 1053 aa13.65□□□□□ -0.22
PHGDH-233ENST00000642021 ALPLP05186 524 aa13.65□□□□□ -0.22
PHGDH-233ENST00000642021 CDH1P12830 882 aa13.65□□□□□ -0.22
PHGDH-233ENST00000642021 HMOX2P30519 316 aa13.65□□□□□ -0.22
PHGDH-233ENST00000642021 GJA8P48165 433 aa13.65□□□□□ -0.22
PHGDH-233ENST00000642021 IL2P60568 153 aa13.65□□□□□ -0.22
PHGDH-233ENST00000642021 RPS24P62847 133 aaKnown RBP13.65□□□□□ -0.22
PHGDH-233ENST00000642021 GNA12Q03113 381 aa13.65□□□□□ -0.22
PHGDH-233ENST00000642021 DSC1Q08554 894 aa13.65□□□□□ -0.22
PHGDH-233ENST00000642021 TAF1CQ15572 869 aaPredicted RBP13.65□□□□□ -0.22
PHGDH-233ENST00000642021 TAF1AQ15573 450 aaPredicted RBP13.65□□□□□ -0.22
PHGDH-233ENST00000642021 NKG7Q16617 165 aa13.65□□□□□ -0.22
PHGDH-233ENST00000642021 TXNDC11Q6PKC3 985 aa13.65□□□□□ -0.22
PHGDH-233ENST00000642021 IL27RAQ6UWB1 636 aa13.65□□□□□ -0.22
PHGDH-233ENST00000642021 HS3ST5Q8IZT8 346 aa13.65□□□□□ -0.22
PHGDH-233ENST00000642021 LPCAT1Q8NF37 534 aa13.65□□□□□ -0.22
PHGDH-233ENST00000642021 OR13F1Q8NGS4 319 aa13.65□□□□□ -0.22
PHGDH-233ENST00000642021 METTL6Q8TCB7 284 aa13.65□□□□□ -0.22
PHGDH-233ENST00000642021 ACDQ96AP0 544 aa13.65□□□□□ -0.22
PHGDH-233ENST00000642021 PSKH2Q96QS6 385 aa13.65□□□□□ -0.22
PHGDH-233ENST00000642021 CGREF1Q99674 301 aa13.65□□□□□ -0.22
PHGDH-233ENST00000642021 FANCEQ9HB96 536 aa13.65□□□□□ -0.22
PHGDH-233ENST00000642021 TRMT13Q9NUP7 481 aaKnown RBP13.65□□□□□ -0.22
PHGDH-233ENST00000642021 TRMT6Q9UJA5 497 aaKnown RBP13.65□□□□□ -0.22
PHGDH-233ENST00000642021 ST14Q9Y5Y6 855 aa13.65□□□□□ -0.22
PHGDH-233ENST00000642021 H0YAE9 185 aa13.64□□□□□ -0.23
PHGDH-233ENST00000642021 INSIG1O15503 277 aa13.64□□□□□ -0.23
PHGDH-233ENST00000642021 VPS26AO75436 327 aa13.64□□□□□ -0.23
PHGDH-233ENST00000642021 KATNA1O75449 491 aa13.64□□□□□ -0.23
PHGDH-233ENST00000642021 CELF2O95319 508 aaKnown RBP13.64□□□□□ -0.23
PHGDH-233ENST00000642021 CNPP09543 421 aaKnown RBP13.64□□□□□ -0.23
PHGDH-233ENST00000642021 CR2P20023 1033 aa13.64□□□□□ -0.23
PHGDH-233ENST00000642021 TTKP33981 857 aa13.64□□□□□ -0.23
PHGDH-233ENST00000642021 NAA20P61599 178 aa13.64□□□□□ -0.23
PHGDH-233ENST00000642021 SFSWAPQ12872 951 aaKnown RBP13.64□□□□□ -0.23
PHGDH-233ENST00000642021 ILF2Q12905 390 aaKnown RBP13.64□□□□□ -0.23
PHGDH-233ENST00000642021 PPP1R8Q12972 351 aaKnown RBP13.64□□□□□ -0.23
PHGDH-233ENST00000642021 CRY1Q16526 586 aa13.64□□□□□ -0.23
PHGDH-233ENST00000642021 XAF1Q6GPH4 301 aa13.64□□□□□ -0.23
PHGDH-233ENST00000642021 C16orf87Q6PH81 154 aa13.64□□□□□ -0.23
PHGDH-233ENST00000642021 ZNF554Q86TJ5 538 aa13.64□□□□□ -0.23
PHGDH-233ENST00000642021 STK32CQ86UX6 486 aa13.64□□□□□ -0.23
PHGDH-233ENST00000642021 ZNF583Q96ND8 569 aa13.64□□□□□ -0.23
PHGDH-233ENST00000642021 TLR8Q9NR97 1041 aaKnown RBP13.64□□□□□ -0.23
PHGDH-233ENST00000642021 RIC8BQ9NVN3 520 aa13.64□□□□□ -0.23
PHGDH-233ENST00000642021 VAPAQ9P0L0 249 aa13.64□□□□□ -0.23
PHGDH-233ENST00000642021 ZFP37Q9Y6Q3 630 aaPredicted RBP13.64□□□□□ -0.23
PHGDH-233ENST00000642021 C2orf81A6NN90 581 aa13.64□□□□□ -0.23
PHGDH-233ENST00000642021 PRSS23O95084 383 aa13.64□□□□□ -0.23
PHGDH-233ENST00000642021 CPNE6O95741 557 aa13.64□□□□□ -0.23
PHGDH-233ENST00000642021 UGT1A1P22309 533 aa13.64□□□□□ -0.23
PHGDH-233ENST00000642021 UGT1A4P22310 534 aa13.64□□□□□ -0.23
PHGDH-233ENST00000642021 UGT1A3P35503 534 aa13.64□□□□□ -0.23
PHGDH-233ENST00000642021 UGT1A5P35504 534 aa13.64□□□□□ -0.23
PHGDH-233ENST00000642021 ALDH3A2P51648 485 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms