RNA–Protein interactions for RNA: ENST00000638794.1

SMN2-216, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-216ENST00000638794 NDUFA10O95299 355 aa16.53■□□□□ 0.24
SMN2-216ENST00000638794 PTMSP20962 102 aa16.53■□□□□ 0.24
SMN2-216ENST00000638794 DLSTP36957 453 aa16.53■□□□□ 0.24
SMN2-216ENST00000638794 HALP42357 657 aa16.53■□□□□ 0.24
SMN2-216ENST00000638794 MARCKSL1P49006 195 aa16.53■□□□□ 0.24
SMN2-216ENST00000638794 DMPKQ09013 629 aa16.53■□□□□ 0.24
SMN2-216ENST00000638794 IL11RAQ14626 422 aa16.53■□□□□ 0.24
SMN2-216ENST00000638794 SLC1A5Q15758 541 aa16.53■□□□□ 0.24
SMN2-216ENST00000638794 PPP2R5EQ16537 467 aa16.53■□□□□ 0.24
SMN2-216ENST00000638794 TFDP3Q5H9I0 405 aa16.53■□□□□ 0.24
SMN2-216ENST00000638794 LDLRAP1Q5SW96 308 aa16.53■□□□□ 0.24
SMN2-216ENST00000638794 ZDHHC20Q5W0Z9 365 aa16.53■□□□□ 0.24
SMN2-216ENST00000638794 FAM83HQ6ZRV2 1179 aaPredicted RBP16.53■□□□□ 0.24
SMN2-216ENST00000638794 AMZ2Q86W34 360 aa16.53■□□□□ 0.24
SMN2-216ENST00000638794 RASGRP3Q8IV61 690 aa16.53■□□□□ 0.24
SMN2-216ENST00000638794 CNGA4Q8IV77 575 aa16.53■□□□□ 0.24
SMN2-216ENST00000638794 DDHD1Q8NEL9 900 aa16.53■□□□□ 0.24
SMN2-216ENST00000638794 APOBEC4Q8WW27 367 aaKnown RBP16.53■□□□□ 0.24
SMN2-216ENST00000638794 KLHL6Q8WZ60 621 aa16.53■□□□□ 0.24
SMN2-216ENST00000638794 STAMBPL1Q96FJ0 436 aa16.53■□□□□ 0.24
SMN2-216ENST00000638794 QKIQ96PU8 341 aaKnown RBP eCLIP16.53■□□□□ 0.24
SMN2-216ENST00000638794 ZCCHC2Q9C0B9 1178 aaKnown RBP16.53■□□□□ 0.24
SMN2-216ENST00000638794 HACD3Q9P035 362 aa16.53■□□□□ 0.24
SMN2-216ENST00000638794 EPHA6Q9UF33 1036 aa16.53■□□□□ 0.24
SMN2-216ENST00000638794 NAV2Q8IVL1 2488 aa16.52■□□□□ 0.24
SMN2-216ENST00000638794 GLYATL1P3A0A0U1RQE8 302 aa16.52■□□□□ 0.24
SMN2-216ENST00000638794 OR2AG2A6NM03 316 aa16.52■□□□□ 0.24
SMN2-216ENST00000638794 GAPDHSO14556 408 aaPredicted RBP16.52■□□□□ 0.24
SMN2-216ENST00000638794 KCNJ13O60928 360 aa16.52■□□□□ 0.24
SMN2-216ENST00000638794 POP7O75817 140 aaKnown RBP16.52■□□□□ 0.24
SMN2-216ENST00000638794 FGF5P12034 268 aa16.52■□□□□ 0.24
SMN2-216ENST00000638794 HLA-DPA1P20036 260 aa16.52■□□□□ 0.24
SMN2-216ENST00000638794 HADHBP55084 474 aaKnown RBP16.52■□□□□ 0.24
SMN2-216ENST00000638794 MPP3Q13368 585 aa16.52■□□□□ 0.24
SMN2-216ENST00000638794 RPE65Q16518 533 aa16.52■□□□□ 0.24
SMN2-216ENST00000638794 GPRC6AQ5T6X5 926 aa16.52■□□□□ 0.24
SMN2-216ENST00000638794 PID1Q7Z2X4 250 aa16.52■□□□□ 0.24
SMN2-216ENST00000638794 KATNAL2Q8IYT4 538 aa16.52■□□□□ 0.24
SMN2-216ENST00000638794 COL26A1Q96A83 441 aa16.52■□□□□ 0.24
SMN2-216ENST00000638794 ABHD17AQ96GS6 310 aa16.52■□□□□ 0.24
SMN2-216ENST00000638794 VAT1Q99536 393 aa16.52■□□□□ 0.24
SMN2-216ENST00000638794 RAB33BQ9H082 229 aa16.52■□□□□ 0.24
SMN2-216ENST00000638794 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.52■□□□□ 0.24
SMN2-216ENST00000638794 LNPEPQ9UIQ6 1025 aa16.52■□□□□ 0.24
SMN2-216ENST00000638794 PSMD13Q9UNM6 376 aa16.52■□□□□ 0.24
SMN2-216ENST00000638794 PKP3Q9Y446 797 aa16.52■□□□□ 0.24
SMN2-216ENST00000638794 DOPEY2Q9Y3R5 2298 aa16.51■□□□□ 0.23
SMN2-216ENST00000638794 IGHV5-51A0A0C4DH38 117 aa16.51■□□□□ 0.23
SMN2-216ENST00000638794 GOLGA6L3A6NEY3 463 aa16.51■□□□□ 0.23
SMN2-216ENST00000638794 AKR1B15C9JRZ8 316 aaPredicted RBP16.51■□□□□ 0.23
SMN2-216ENST00000638794 SPAG6O75602 509 aa16.51■□□□□ 0.23
SMN2-216ENST00000638794 ZRANB2O95218 330 aaKnown RBP eCLIP16.51■□□□□ 0.23
SMN2-216ENST00000638794 NELFEP18615 380 aaKnown RBP16.51■□□□□ 0.23
SMN2-216ENST00000638794 FECHP22830 423 aa16.51■□□□□ 0.23
SMN2-216ENST00000638794 TBX2Q13207 712 aaPredicted RBP16.51■□□□□ 0.23
SMN2-216ENST00000638794 ITGA9Q13797 1035 aa16.51■□□□□ 0.23
SMN2-216ENST00000638794 NFE2L1Q14494 772 aa16.51■□□□□ 0.23
SMN2-216ENST00000638794 PTPRCAPQ14761 206 aa16.51■□□□□ 0.23
SMN2-216ENST00000638794 TMEM220Q6QAJ8 160 aa16.51■□□□□ 0.23
SMN2-216ENST00000638794 PPP1R3BQ86XI6 285 aa16.51■□□□□ 0.23
SMN2-216ENST00000638794 CCDC50Q8IVM0 306 aa16.51■□□□□ 0.23
SMN2-216ENST00000638794 RNF214Q8ND24 703 aa16.51■□□□□ 0.23
SMN2-216ENST00000638794 RSPH14Q9UHP6 348 aa16.51■□□□□ 0.23
SMN2-216ENST00000638794 KCTD3Q9Y597 815 aa16.51■□□□□ 0.23
SMN2-216ENST00000638794 PCDHB3Q9Y5E6 796 aa16.51■□□□□ 0.23
SMN2-216ENST00000638794 HACD1B0YJ81 288 aa16.5■□□□□ 0.23
SMN2-216ENST00000638794 TIAF1O95411 115 aa16.5■□□□□ 0.23
SMN2-216ENST00000638794 FURINP09958 794 aa16.5■□□□□ 0.23
SMN2-216ENST00000638794 PBLDP30039 288 aaPredicted RBP16.5■□□□□ 0.23
SMN2-216ENST00000638794 CASRP41180 1078 aa16.5■□□□□ 0.23
SMN2-216ENST00000638794 MAGEA1P43355 309 aa16.5■□□□□ 0.23
SMN2-216ENST00000638794 SEPT6Q14141 434 aa16.5■□□□□ 0.23
SMN2-216ENST00000638794 ERV3-1Q14264 604 aa16.5■□□□□ 0.23
SMN2-216ENST00000638794 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.5■□□□□ 0.23
SMN2-216ENST00000638794 RCOR2Q8IZ40 523 aa16.5■□□□□ 0.23
SMN2-216ENST00000638794 BEND7Q8N7W2 519 aaPredicted RBP16.5■□□□□ 0.23
SMN2-216ENST00000638794 FSD1LQ9BXM9 530 aa16.5■□□□□ 0.23
SMN2-216ENST00000638794 TSPY26PQ9H489 355 aa16.5■□□□□ 0.23
SMN2-216ENST00000638794 C10orf88Q9H8K7 445 aa16.5■□□□□ 0.23
SMN2-216ENST00000638794 SMOXQ9NWM0 555 aa16.5■□□□□ 0.23
SMN2-216ENST00000638794 SEMA5BQ9P283 1151 aa16.5■□□□□ 0.23
SMN2-216ENST00000638794 ANAPC2Q9UJX6 822 aa16.5■□□□□ 0.23
SMN2-216ENST00000638794 TRHDEQ9UKU6 1024 aa16.5■□□□□ 0.23
SMN2-216ENST00000638794 TFR2Q9UP52 801 aa16.5■□□□□ 0.23
SMN2-216ENST00000638794 KCNMB2Q9Y691 235 aa16.5■□□□□ 0.23
SMN2-216ENST00000638794 CFAP20Q9Y6A4 193 aaKnown RBP16.5■□□□□ 0.23
SMN2-216ENST00000638794 DNMT3AQ9Y6K1 912 aaPredicted RBP16.5■□□□□ 0.23
SMN2-216ENST00000638794 STX7O15400 261 aaKnown RBP16.49■□□□□ 0.23
SMN2-216ENST00000638794 KATNA1O75449 491 aa16.49■□□□□ 0.23
SMN2-216ENST00000638794 PRAMEF1O95521 474 aa16.49■□□□□ 0.23
SMN2-216ENST00000638794 AGTP01019 485 aa16.49■□□□□ 0.23
SMN2-216ENST00000638794 CCNYL3P0C7X3 344 aa16.49■□□□□ 0.23
SMN2-216ENST00000638794 AKT1P31749 480 aa16.49■□□□□ 0.23
SMN2-216ENST00000638794 TUBB3Q13509 450 aa16.49■□□□□ 0.23
SMN2-216ENST00000638794 KCNAB1Q14722 419 aa16.49■□□□□ 0.23
SMN2-216ENST00000638794 PLCL1Q15111 1095 aa16.49■□□□□ 0.23
SMN2-216ENST00000638794 LACTB2Q53H82 288 aaPredicted RBP16.49■□□□□ 0.23
SMN2-216ENST00000638794 FNBP1LQ5T0N5 605 aa16.49■□□□□ 0.23
SMN2-216ENST00000638794 METRNLQ641Q3 311 aa16.49■□□□□ 0.23
SMN2-216ENST00000638794 CYB5D1Q6P9G0 228 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 120.7 ms