RNA–Protein interactions for RNA: ENST00000637450.1

CLN6-220, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3

Gene CLN6, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-220ENST00000637450 F5H423 210 aaPredicted RBP18.1■□□□□ 0.49
CLN6-220ENST00000637450 GAPDHSO14556 408 aaPredicted RBP18.1■□□□□ 0.49
CLN6-220ENST00000637450 NDUFA10O95299 355 aa18.1■□□□□ 0.49
CLN6-220ENST00000637450 NELFEP18615 380 aaKnown RBP18.1■□□□□ 0.49
CLN6-220ENST00000637450 HLA-DPA1P20036 260 aa18.1■□□□□ 0.49
CLN6-220ENST00000637450 HALP42357 657 aa18.1■□□□□ 0.49
CLN6-220ENST00000637450 MAGEA1P43355 309 aa18.1■□□□□ 0.49
CLN6-220ENST00000637450 CTSCP53634 463 aa18.1■□□□□ 0.49
CLN6-220ENST00000637450 MPP3Q13368 585 aa18.1■□□□□ 0.49
CLN6-220ENST00000637450 PPP2R5EQ16537 467 aa18.1■□□□□ 0.49
CLN6-220ENST00000637450 ATP1A1-AS1Q5TC04 95 aa18.1■□□□□ 0.49
CLN6-220ENST00000637450 IRGCQ6NXR0 463 aa18.1■□□□□ 0.49
CLN6-220ENST00000637450 C16orf46Q6P387 395 aa18.1■□□□□ 0.49
CLN6-220ENST00000637450 FAM151BQ6UXP7 276 aa18.1■□□□□ 0.49
CLN6-220ENST00000637450 FAM92BQ6ZTR7 304 aa18.1■□□□□ 0.49
CLN6-220ENST00000637450 GLT6D1Q7Z4J2 308 aa18.1■□□□□ 0.49
CLN6-220ENST00000637450 RASGRP3Q8IV61 690 aa18.1■□□□□ 0.49
CLN6-220ENST00000637450 GALNT6Q8NCL4 622 aa18.1■□□□□ 0.49
CLN6-220ENST00000637450 C9orf43Q8TAL5 461 aaPredicted RBP18.1■□□□□ 0.49
CLN6-220ENST00000637450 BLOC1S5Q8TDH9 187 aa18.1■□□□□ 0.49
CLN6-220ENST00000637450 RNF31Q96EP0 1072 aa18.1■□□□□ 0.49
CLN6-220ENST00000637450 QKIQ96PU8 341 aaKnown RBP eCLIP18.1■□□□□ 0.49
CLN6-220ENST00000637450 ZCCHC2Q9C0B9 1178 aaKnown RBP18.1■□□□□ 0.49
CLN6-220ENST00000637450 GOLPH3Q9H4A6 298 aa18.1■□□□□ 0.49
CLN6-220ENST00000637450 COL12A1Q99715 3063 aa18.09■□□□□ 0.49
CLN6-220ENST00000637450 HACD1B0YJ81 288 aa18.09■□□□□ 0.49
CLN6-220ENST00000637450 GPR39O43194 453 aa18.09■□□□□ 0.49
CLN6-220ENST00000637450 BUD23O43709 281 aaKnown RBP18.09■□□□□ 0.49
CLN6-220ENST00000637450 SPAG6O75602 509 aa18.09■□□□□ 0.49
CLN6-220ENST00000637450 KIAA0754O94854 1291 aa18.09■□□□□ 0.49
CLN6-220ENST00000637450 FECHP22830 423 aa18.09■□□□□ 0.49
CLN6-220ENST00000637450 DLSTP36957 453 aa18.09■□□□□ 0.49
CLN6-220ENST00000637450 ITGA9Q13797 1035 aa18.09■□□□□ 0.49
CLN6-220ENST00000637450 RPE65Q16518 533 aa18.09■□□□□ 0.49
CLN6-220ENST00000637450 SKIDA1Q1XH10 827 aa18.09■□□□□ 0.49
CLN6-220ENST00000637450 LARP7Q4G0J3 582 aaKnown RBP eCLIP18.09■□□□□ 0.49
CLN6-220ENST00000637450 GPRC6AQ5T6X5 926 aa18.09■□□□□ 0.49
CLN6-220ENST00000637450 FAM83HQ6ZRV2 1179 aaPredicted RBP18.09■□□□□ 0.49
CLN6-220ENST00000637450 IPMKQ8NFU5 416 aa18.09■□□□□ 0.49
CLN6-220ENST00000637450 HAUS1Q96CS2 278 aa18.09■□□□□ 0.49
CLN6-220ENST00000637450 ABHD17AQ96GS6 310 aa18.09■□□□□ 0.49
CLN6-220ENST00000637450 ELMO2Q96JJ3 720 aa18.09■□□□□ 0.49
CLN6-220ENST00000637450 SLC41A2Q96JW4 573 aa18.09■□□□□ 0.49
CLN6-220ENST00000637450 TSPY26PQ9H489 355 aa18.09■□□□□ 0.49
CLN6-220ENST00000637450 ZNF71Q9NQZ8 489 aaPredicted RBP18.09■□□□□ 0.49
CLN6-220ENST00000637450 CROTQ9UKG9 612 aa18.09■□□□□ 0.49
CLN6-220ENST00000637450 TRHDEQ9UKU6 1024 aa18.09■□□□□ 0.49
CLN6-220ENST00000637450 PKP3Q9Y446 797 aa18.09■□□□□ 0.49
CLN6-220ENST00000637450 METRNLQ641Q3 311 aa18.08■□□□□ 0.48
CLN6-220ENST00000637450 PPP1R3BQ86XI6 285 aa18.08■□□□□ 0.48
CLN6-220ENST00000637450 GPR150Q8NGU9 434 aa18.08■□□□□ 0.48
CLN6-220ENST00000637450 COL26A1Q96A83 441 aa18.08■□□□□ 0.48
CLN6-220ENST00000637450 STAMBPL1Q96FJ0 436 aa18.08■□□□□ 0.48
CLN6-220ENST00000637450 EPN3Q9H201 632 aa18.08■□□□□ 0.48
CLN6-220ENST00000637450 SMOXQ9NWM0 555 aa18.08■□□□□ 0.48
CLN6-220ENST00000637450 RSPH14Q9UHP6 348 aa18.08■□□□□ 0.48
CLN6-220ENST00000637450 ANAPC2Q9UJX6 822 aa18.08■□□□□ 0.48
CLN6-220ENST00000637450 PSMD13Q9UNM6 376 aa18.08■□□□□ 0.48
CLN6-220ENST00000637450 KCTD3Q9Y597 815 aa18.08■□□□□ 0.48
CLN6-220ENST00000637450 PCDHB3Q9Y5E6 796 aa18.08■□□□□ 0.48
CLN6-220ENST00000637450 IGHV5-51A0A0C4DH38 117 aa18.07■□□□□ 0.48
CLN6-220ENST00000637450 OR2AG2A6NM03 316 aa18.07■□□□□ 0.48
CLN6-220ENST00000637450 STX7O15400 261 aaKnown RBP18.07■□□□□ 0.48
CLN6-220ENST00000637450 LCA5LO95447 670 aa18.07■□□□□ 0.48
CLN6-220ENST00000637450 AGTP01019 485 aa18.07■□□□□ 0.48
CLN6-220ENST00000637450 CCNYL3P0C7X3 344 aa18.07■□□□□ 0.48
CLN6-220ENST00000637450 CASRP41180 1078 aa18.07■□□□□ 0.48
CLN6-220ENST00000637450 MARCKSL1P49006 195 aa18.07■□□□□ 0.48
CLN6-220ENST00000637450 PPP1CAP62136 330 aa18.07■□□□□ 0.48
CLN6-220ENST00000637450 XRCC4Q13426 336 aa18.07■□□□□ 0.48
CLN6-220ENST00000637450 NFE2L1Q14494 772 aa18.07■□□□□ 0.48
CLN6-220ENST00000637450 PTPRCAPQ14761 206 aa18.07■□□□□ 0.48
CLN6-220ENST00000637450 CYB5D1Q6P9G0 228 aa18.07■□□□□ 0.48
CLN6-220ENST00000637450 KLHL35Q6PF15 583 aa18.07■□□□□ 0.48
CLN6-220ENST00000637450 BBS12Q6ZW61 710 aa18.07■□□□□ 0.48
CLN6-220ENST00000637450 CCDC50Q8IVM0 306 aa18.07■□□□□ 0.48
CLN6-220ENST00000637450 RNF214Q8ND24 703 aa18.07■□□□□ 0.48
CLN6-220ENST00000637450 ZNF398Q8TD17 642 aa18.07■□□□□ 0.48
CLN6-220ENST00000637450 UBXN4Q92575 508 aa18.07■□□□□ 0.48
CLN6-220ENST00000637450 RBM41Q96IZ5 413 aaKnown RBP18.07■□□□□ 0.48
CLN6-220ENST00000637450 ZNF514Q96K75 400 aaPredicted RBP18.07■□□□□ 0.48
CLN6-220ENST00000637450 HEMGNQ9BXL5 484 aa18.07■□□□□ 0.48
CLN6-220ENST00000637450 FSD1LQ9BXM9 530 aa18.07■□□□□ 0.48
CLN6-220ENST00000637450 PDE7BQ9NP56 450 aa18.07■□□□□ 0.48
CLN6-220ENST00000637450 LNPEPQ9UIQ6 1025 aa18.07■□□□□ 0.48
CLN6-220ENST00000637450 KCND3Q9UK17 655 aa18.07■□□□□ 0.48
CLN6-220ENST00000637450 PADI1Q9ULC6 663 aa18.07■□□□□ 0.48
CLN6-220ENST00000637450 KCNMB2Q9Y691 235 aa18.07■□□□□ 0.48
CLN6-220ENST00000637450 RELNP78509 3460 aa18.07■□□□□ 0.48
CLN6-220ENST00000637450 MAST4O15021 2626 aa18.06■□□□□ 0.48
CLN6-220ENST00000637450 FLNCQ14315 2725 aa18.06■□□□□ 0.48
CLN6-220ENST00000637450 CYSRT1A8MQ03 144 aa18.06■□□□□ 0.48
CLN6-220ENST00000637450 APOC4-APOC2K7ER74 178 aa18.06■□□□□ 0.48
CLN6-220ENST00000637450 APOC2P02655 101 aa18.06■□□□□ 0.48
CLN6-220ENST00000637450 MT-ND3P03897 115 aa18.06■□□□□ 0.48
CLN6-220ENST00000637450 FOLR1P15328 257 aa18.06■□□□□ 0.48
CLN6-220ENST00000637450 RBL1P28749 1068 aa18.06■□□□□ 0.48
CLN6-220ENST00000637450 SEPT6Q14141 434 aa18.06■□□□□ 0.48
CLN6-220ENST00000637450 ERV3-1Q14264 604 aa18.06■□□□□ 0.48
CLN6-220ENST00000637450 LONRF2Q1L5Z9 754 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms