RNA–Protein interactions for RNA: ENST00000637329.1

CLN6-219, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,204 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-219ENST00000637329 ATOH8Q96SQ7 321 aa15.13■□□□□ 0.01
CLN6-219ENST00000637329 NELL2Q99435 816 aa15.13■□□□□ 0.01
CLN6-219ENST00000637329 C1QTNF2Q9BXJ5 285 aa15.13■□□□□ 0.01
CLN6-219ENST00000637329 FAM126AQ9BYI3 521 aaPredicted RBP15.13■□□□□ 0.01
CLN6-219ENST00000637329 SLCO1B3Q9NPD5 702 aa15.13■□□□□ 0.01
CLN6-219ENST00000637329 GALPQ9UBC7 116 aa15.13■□□□□ 0.01
CLN6-219ENST00000637329 CA14Q9ULX7 337 aa15.13■□□□□ 0.01
CLN6-219ENST00000637329 MTF2Q9Y483 593 aaPredicted RBP15.13■□□□□ 0.01
CLN6-219ENST00000637329 ZDBF2Q9HCK1 2354 aa15.13■□□□□ 0.01
CLN6-219ENST00000637329 ZNF318Q5VUA4 2279 aa15.12■□□□□ 0.01
CLN6-219ENST00000637329 IGLON5A6NGN9 336 aa15.12■□□□□ 0.01
CLN6-219ENST00000637329 A8MT66 165 aa15.12■□□□□ 0.01
CLN6-219ENST00000637329 IQCF5A8MTL0 148 aa15.12■□□□□ 0.01
CLN6-219ENST00000637329 GPR89AB7ZAQ6 455 aa15.12■□□□□ 0.01
CLN6-219ENST00000637329 BTN3A1O00481 513 aa15.12■□□□□ 0.01
CLN6-219ENST00000637329 SNX3O60493 162 aa15.12■□□□□ 0.01
CLN6-219ENST00000637329 IPO13O94829 963 aaKnown RBP15.12■□□□□ 0.01
CLN6-219ENST00000637329 TRIM16O95361 564 aa15.12■□□□□ 0.01
CLN6-219ENST00000637329 IGLV3-19P01714 112 aa15.12■□□□□ 0.01
CLN6-219ENST00000637329 GPR89BP0CG08 455 aa15.12■□□□□ 0.01
CLN6-219ENST00000637329 TPBGLP0DKB5 382 aa15.12■□□□□ 0.01
CLN6-219ENST00000637329 TARSP26639 723 aaKnown RBP15.12■□□□□ 0.01
CLN6-219ENST00000637329 GTF2H3Q13889 308 aa15.12■□□□□ 0.01
CLN6-219ENST00000637329 KIAA1324Q6UXG2 1013 aaKnown RBP15.12■□□□□ 0.01
CLN6-219ENST00000637329 TMEM92Q6UXU6 159 aa15.12■□□□□ 0.01
CLN6-219ENST00000637329 NEK10Q6ZWH5 1172 aa15.12■□□□□ 0.01
CLN6-219ENST00000637329 HORMAD1Q86X24 394 aa15.12■□□□□ 0.01
CLN6-219ENST00000637329 KIRREL3Q8IZU9 778 aa15.12■□□□□ 0.01
CLN6-219ENST00000637329 DENND6BQ8NEG7 585 aa15.12■□□□□ 0.01
CLN6-219ENST00000637329 OR14C36Q8NHC7 312 aa15.12■□□□□ 0.01
CLN6-219ENST00000637329 EEF1AKMT1Q8WVE0 214 aa15.12■□□□□ 0.01
CLN6-219ENST00000637329 EDAQ92838 391 aa15.12■□□□□ 0.01
CLN6-219ENST00000637329 ATOH1Q92858 354 aaPredicted RBP15.12■□□□□ 0.01
CLN6-219ENST00000637329 COX14Q96I36 57 aa15.12■□□□□ 0.01
CLN6-219ENST00000637329 PLCD4Q9BRC7 762 aa15.12■□□□□ 0.01
CLN6-219ENST00000637329 SIKE1Q9BRV8 207 aa15.12■□□□□ 0.01
CLN6-219ENST00000637329 LTB4R2Q9NPC1 389 aa15.12■□□□□ 0.01
CLN6-219ENST00000637329 NCKIPSDQ9NZQ3 722 aa15.12■□□□□ 0.01
CLN6-219ENST00000637329 USP36Q9P275 1121 aaKnown RBP15.12■□□□□ 0.01
CLN6-219ENST00000637329 FBXL21Q9UKT6 434 aa15.12■□□□□ 0.01
CLN6-219ENST00000637329 CNOT6Q9ULM6 557 aaKnown RBP15.12■□□□□ 0.01
CLN6-219ENST00000637329 RNF112Q9ULX5 631 aa15.12■□□□□ 0.01
CLN6-219ENST00000637329 ZFR2Q9UPR6 939 aaKnown RBP15.12■□□□□ 0.01
CLN6-219ENST00000637329 F5P12259 2224 aa15.11■□□□□ 0.01
CLN6-219ENST00000637329 KANSL1LA0AUZ9 987 aa15.11■□□□□ 0.01
CLN6-219ENST00000637329 NPEPPSL1A6NEC2 478 aa15.11■□□□□ 0.01
CLN6-219ENST00000637329 K7ESM1 405 aa15.11■□□□□ 0.01
CLN6-219ENST00000637329 SGTAO43765 313 aa15.11■□□□□ 0.01
CLN6-219ENST00000637329 NUAK1O60285 661 aa15.11■□□□□ 0.01
CLN6-219ENST00000637329 DLX3O60479 287 aa15.11■□□□□ 0.01
CLN6-219ENST00000637329 NPHS1O60500 1241 aa15.11■□□□□ 0.01
CLN6-219ENST00000637329 MPC1LP0DKB6 136 aa15.11■□□□□ 0.01
CLN6-219ENST00000637329 GABRG2P18507 467 aa15.11■□□□□ 0.01
CLN6-219ENST00000637329 CD72P21854 359 aa15.11■□□□□ 0.01
CLN6-219ENST00000637329 AOAHP28039 575 aa15.11■□□□□ 0.01
CLN6-219ENST00000637329 MAPK9P45984 424 aa15.11■□□□□ 0.01
CLN6-219ENST00000637329 SLC1A6P48664 564 aa15.11■□□□□ 0.01
CLN6-219ENST00000637329 HK2P52789 917 aa15.11■□□□□ 0.01
CLN6-219ENST00000637329 TMEM115Q12893 351 aaPredicted RBP15.11■□□□□ 0.01
CLN6-219ENST00000637329 SP140Q13342 867 aa15.11■□□□□ 0.01
CLN6-219ENST00000637329 RCN2Q14257 317 aa15.11■□□□□ 0.01
CLN6-219ENST00000637329 OR4D1Q15615 310 aa15.11■□□□□ 0.01
CLN6-219ENST00000637329 TSNQ15631 228 aaKnown RBP15.11■□□□□ 0.01
CLN6-219ENST00000637329 KHDC1Q4VXA5 237 aaKnown RBP15.11■□□□□ 0.01
CLN6-219ENST00000637329 SEL1L3Q68CR1 1132 aa15.11■□□□□ 0.01
CLN6-219ENST00000637329 CGB2Q6NT52 195 aa15.11■□□□□ 0.01
CLN6-219ENST00000637329 PNCKQ6P2M8 343 aa15.11■□□□□ 0.01
CLN6-219ENST00000637329 Q6ZS52 159 aa15.11■□□□□ 0.01
CLN6-219ENST00000637329 ZCCHC23Q6ZST2 131 aa15.11■□□□□ 0.01
CLN6-219ENST00000637329 TRIM69Q86WT6 500 aa15.11■□□□□ 0.01
CLN6-219ENST00000637329 CRLF3Q8IUI8 442 aa15.11■□□□□ 0.01
CLN6-219ENST00000637329 CACNA2D3Q8IZS8 1091 aa15.11■□□□□ 0.01
CLN6-219ENST00000637329 ANKS4BQ8N8V4 417 aa15.11■□□□□ 0.01
CLN6-219ENST00000637329 TP53I13Q8NBR0 393 aaPredicted RBP15.11■□□□□ 0.01
CLN6-219ENST00000637329 PPP4R1Q8TF05 950 aa15.11■□□□□ 0.01
CLN6-219ENST00000637329 GLMNQ92990 594 aa15.11■□□□□ 0.01
CLN6-219ENST00000637329 L3HYPDHQ96EM0 354 aa15.11■□□□□ 0.01
CLN6-219ENST00000637329 HIC2Q96JB3 615 aa15.11■□□□□ 0.01
CLN6-219ENST00000637329 TRMOQ9BU70 441 aa15.11■□□□□ 0.01
CLN6-219ENST00000637329 UNKQ9C0B0 810 aaKnown RBP15.11■□□□□ 0.01
CLN6-219ENST00000637329 SLC6A17Q9H1V8 727 aa15.11■□□□□ 0.01
CLN6-219ENST00000637329 RABEP2Q9H5N1 569 aa15.11■□□□□ 0.01
CLN6-219ENST00000637329 SGK2Q9HBY8 427 aa15.11■□□□□ 0.01
CLN6-219ENST00000637329 TRIM39Q9HCM9 518 aa15.11■□□□□ 0.01
CLN6-219ENST00000637329 NUDT4Q9NZJ9 180 aa15.11■□□□□ 0.01
CLN6-219ENST00000637329 KLHL14Q9P2G3 628 aa15.11■□□□□ 0.01
CLN6-219ENST00000637329 GPR34Q9UPC5 381 aa15.11■□□□□ 0.01
CLN6-219ENST00000637329 TRIOO75962 3097 aa15.11■□□□□ 0.01
CLN6-219ENST00000637329 A0A1W2PQU0 124 aa15.1■□□□□ 0.01
CLN6-219ENST00000637329 KLHL33A6NCF5 533 aa15.1■□□□□ 0.01
CLN6-219ENST00000637329 LRRC72A6NJI9 287 aa15.1■□□□□ 0.01
CLN6-219ENST00000637329 INPP4BO15327 924 aa15.1■□□□□ 0.01
CLN6-219ENST00000637329 KLK8O60259 260 aa15.1■□□□□ 0.01
CLN6-219ENST00000637329 RNGTTO60942 597 aaKnown RBP15.1■□□□□ 0.01
CLN6-219ENST00000637329 MTX2O75431 263 aa15.1■□□□□ 0.01
CLN6-219ENST00000637329 CCR7P32248 378 aa15.1■□□□□ 0.01
CLN6-219ENST00000637329 CCR3P51677 355 aa15.1■□□□□ 0.01
CLN6-219ENST00000637329 ABCE1P61221 599 aaKnown RBP15.1■□□□□ 0.01
CLN6-219ENST00000637329 SGCGQ13326 291 aa15.1■□□□□ 0.01
CLN6-219ENST00000637329 WSCD2Q2TBF2 565 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms