RNA–Protein interactions for RNA: ENST00000636194.1

SCN1A-212, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 8,508 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-212ENST00000636194 SAPCD2Q86UD0 394 aa5.96□□□□□ -1.45
SCN1A-212ENST00000636194 LDHDQ86WU2 507 aa5.96□□□□□ -1.45
SCN1A-212ENST00000636194 RASGRP3Q8IV61 690 aa5.96□□□□□ -1.45
SCN1A-212ENST00000636194 TBC1D3Q8IZP1 549 aaPredicted RBP5.96□□□□□ -1.45
SCN1A-212ENST00000636194 TBC1D15Q8TC07 691 aa5.96□□□□□ -1.45
SCN1A-212ENST00000636194 OSBPL5Q9H0X9 879 aaPredicted RBP5.96□□□□□ -1.45
SCN1A-212ENST00000636194 NANSQ9NR45 359 aa5.96□□□□□ -1.45
SCN1A-212ENST00000636194 RAB21Q9UL25 225 aa5.96□□□□□ -1.45
SCN1A-212ENST00000636194 ZNRF3Q9ULT6 936 aa5.96□□□□□ -1.45
SCN1A-212ENST00000636194 TBX20Q9UMR3 447 aa5.96□□□□□ -1.45
SCN1A-212ENST00000636194 PRELID1Q9Y255 219 aa5.96□□□□□ -1.45
SCN1A-212ENST00000636194 PRKAB1Q9Y478 270 aa5.96□□□□□ -1.45
SCN1A-212ENST00000636194 BACE2Q9Y5Z0 518 aa5.96□□□□□ -1.45
SCN1A-212ENST00000636194 UMODL1Q5DID0 1318 aa5.96□□□□□ -1.45
SCN1A-212ENST00000636194 CNTNAP2Q9UHC6 1331 aa5.96□□□□□ -1.45
SCN1A-212ENST00000636194 ESYT3A0FGR9 886 aa5.96□□□□□ -1.45
SCN1A-212ENST00000636194 KCNJ13O60928 360 aa5.96□□□□□ -1.45
SCN1A-212ENST00000636194 TNFSF4P23510 183 aa5.96□□□□□ -1.45
SCN1A-212ENST00000636194 ACVR2AP27037 513 aa5.96□□□□□ -1.45
SCN1A-212ENST00000636194 MAN2A2P49641 1150 aa5.96□□□□□ -1.45
SCN1A-212ENST00000636194 SLC29A4Q7RTT9 530 aa5.96□□□□□ -1.45
SCN1A-212ENST00000636194 SLC22A15Q8IZD6 547 aa5.96□□□□□ -1.45
SCN1A-212ENST00000636194 MCOLN2Q8IZK6 566 aa5.96□□□□□ -1.45
SCN1A-212ENST00000636194 NXPE1Q8N323 547 aa5.96□□□□□ -1.45
SCN1A-212ENST00000636194 ARL5BQ96KC2 179 aa5.96□□□□□ -1.45
SCN1A-212ENST00000636194 KATNBL1Q9H079 304 aa5.96□□□□□ -1.45
SCN1A-212ENST00000636194 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.96□□□□□ -1.45
SCN1A-212ENST00000636194 CACNA1GO43497 2377 aa5.96□□□□□ -1.45
SCN1A-212ENST00000636194 A0A1W2PP64 1363 aa5.96□□□□□ -1.46
SCN1A-212ENST00000636194 DISP3Q9P2K9 1392 aa5.96□□□□□ -1.46
SCN1A-212ENST00000636194 RBM47A0AV96 593 aaKnown RBP5.96□□□□□ -1.46
SCN1A-212ENST00000636194 D6RAR5 112 aa5.96□□□□□ -1.46
SCN1A-212ENST00000636194 FARS2O95363 451 aaKnown RBP5.96□□□□□ -1.46
SCN1A-212ENST00000636194 AGR2O95994 175 aa5.96□□□□□ -1.46
SCN1A-212ENST00000636194 HOXA9P31269 272 aa5.96□□□□□ -1.46
SCN1A-212ENST00000636194 FXR1P51114 621 aaKnown RBP eCLIP5.96□□□□□ -1.46
SCN1A-212ENST00000636194 SLC13A2Q13183 592 aa5.96□□□□□ -1.46
SCN1A-212ENST00000636194 ZNF470Q6ECI4 717 aa5.96□□□□□ -1.46
SCN1A-212ENST00000636194 RAB12Q6IQ22 244 aa5.96□□□□□ -1.46
SCN1A-212ENST00000636194 WDR49Q8IV35 697 aa5.96□□□□□ -1.46
SCN1A-212ENST00000636194 KBTBD2Q8IY47 623 aa5.96□□□□□ -1.46
SCN1A-212ENST00000636194 SFRP1Q8N474 314 aa5.96□□□□□ -1.46
SCN1A-212ENST00000636194 TMCO6Q96DC7 493 aa5.96□□□□□ -1.46
SCN1A-212ENST00000636194 ZBTB10Q96DT7 871 aa5.96□□□□□ -1.46
SCN1A-212ENST00000636194 CCDC74BQ96LY2 380 aa5.96□□□□□ -1.46
SCN1A-212ENST00000636194 APOL2Q9BQE5 337 aa5.96□□□□□ -1.46
SCN1A-212ENST00000636194 CDC14AQ9UNH5 594 aa5.96□□□□□ -1.46
SCN1A-212ENST00000636194 ICKQ9UPZ9 632 aa5.96□□□□□ -1.46
SCN1A-212ENST00000636194 MTCL1Q9Y4B5 1905 aaKnown RBP5.96□□□□□ -1.46
SCN1A-212ENST00000636194 BIVM-ERCC5R4GMW8 1640 aa5.96□□□□□ -1.46
SCN1A-212ENST00000636194 SCDO00767 359 aa5.96□□□□□ -1.46
SCN1A-212ENST00000636194 ZBTB7BO15156 539 aaPredicted RBP5.96□□□□□ -1.46
SCN1A-212ENST00000636194 RAD51CO43502 376 aa5.96□□□□□ -1.46
SCN1A-212ENST00000636194 CD247P20963 164 aa5.96□□□□□ -1.46
SCN1A-212ENST00000636194 S100A10P60903 97 aa5.96□□□□□ -1.46
SCN1A-212ENST00000636194 ELP6Q0PNE2 266 aa5.96□□□□□ -1.46
SCN1A-212ENST00000636194 SCAPQ12770 1279 aa5.96□□□□□ -1.46
SCN1A-212ENST00000636194 PFKFB4Q16877 469 aa5.96□□□□□ -1.46
SCN1A-212ENST00000636194 C4orf17Q53FE4 359 aa5.96□□□□□ -1.46
SCN1A-212ENST00000636194 CDKAL1Q5VV42 579 aa5.96□□□□□ -1.46
SCN1A-212ENST00000636194 ZNF767PQ75MW2 155 aa5.96□□□□□ -1.46
SCN1A-212ENST00000636194 ABHD13Q7L211 337 aa5.96□□□□□ -1.46
SCN1A-212ENST00000636194 CPNE9Q8IYJ1 553 aa5.96□□□□□ -1.46
SCN1A-212ENST00000636194 FBXO30Q8TB52 745 aa5.96□□□□□ -1.46
SCN1A-212ENST00000636194 SH3RF3Q8TEJ3 882 aaPredicted RBP5.96□□□□□ -1.46
SCN1A-212ENST00000636194 EPYCQ99645 322 aa5.96□□□□□ -1.46
SCN1A-212ENST00000636194 RBM4BQ9BQ04 359 aaKnown RBP5.96□□□□□ -1.46
SCN1A-212ENST00000636194 FEM1AQ9BSK4 669 aa5.96□□□□□ -1.46
SCN1A-212ENST00000636194 RBM4Q9BWF3 364 aaKnown RBP5.96□□□□□ -1.46
SCN1A-212ENST00000636194 TBL1XR1Q9BZK7 514 aa5.96□□□□□ -1.46
SCN1A-212ENST00000636194 A0A087WUU8 490 aa5.96□□□□□ -1.46
SCN1A-212ENST00000636194 TFECO14948 347 aaPredicted RBP5.96□□□□□ -1.46
SCN1A-212ENST00000636194 ADAMDEC1O15204 470 aa5.96□□□□□ -1.46
SCN1A-212ENST00000636194 GLSO94925 669 aaPredicted RBP5.96□□□□□ -1.46
SCN1A-212ENST00000636194 SYNGR4O95473 234 aa5.96□□□□□ -1.46
SCN1A-212ENST00000636194 PTPN4P29074 926 aa5.96□□□□□ -1.46
SCN1A-212ENST00000636194 TUBP50607 506 aa5.96□□□□□ -1.46
SCN1A-212ENST00000636194 AMHR2Q16671 573 aa5.96□□□□□ -1.46
SCN1A-212ENST00000636194 C9orf64Q5T6V5 341 aa5.96□□□□□ -1.46
SCN1A-212ENST00000636194 RBFAQ8N0V3 343 aa5.96□□□□□ -1.46
SCN1A-212ENST00000636194 UBE2J2Q8N2K1 259 aa5.96□□□□□ -1.46
SCN1A-212ENST00000636194 SLC44A1Q8WWI5 657 aa5.96□□□□□ -1.46
SCN1A-212ENST00000636194 C8orf48Q96LL4 319 aa5.96□□□□□ -1.46
SCN1A-212ENST00000636194 SGIP1Q9BQI5 828 aa5.96□□□□□ -1.46
SCN1A-212ENST00000636194 MOB1AQ9H8S9 216 aa5.96□□□□□ -1.46
SCN1A-212ENST00000636194 ACOXLQ9NUZ1 547 aa5.96□□□□□ -1.46
SCN1A-212ENST00000636194 PCTPQ9UKL6 214 aa5.96□□□□□ -1.46
SCN1A-212ENST00000636194 ARHGEF40Q8TER5 1519 aa5.96□□□□□ -1.46
SCN1A-212ENST00000636194 TOPBP1Q92547 1522 aa5.96□□□□□ -1.46
SCN1A-212ENST00000636194 A8MXE2 369 aa5.96□□□□□ -1.46
SCN1A-212ENST00000636194 FTCDNL1E5RQL4 147 aa5.96□□□□□ -1.46
SCN1A-212ENST00000636194 SGCEO43556 437 aa5.96□□□□□ -1.46
SCN1A-212ENST00000636194 COX4I1P13073 169 aa5.96□□□□□ -1.46
SCN1A-212ENST00000636194 RNASE12Q5GAN4 147 aaKnown RBP5.96□□□□□ -1.46
SCN1A-212ENST00000636194 DUPD1Q68J44 220 aa5.96□□□□□ -1.46
SCN1A-212ENST00000636194 APTXQ7Z2E3 356 aaKnown RBP5.96□□□□□ -1.46
SCN1A-212ENST00000636194 TSPYL6Q8N831 410 aa5.96□□□□□ -1.46
SCN1A-212ENST00000636194 SLC47A1Q96FL8 570 aa5.96□□□□□ -1.46
SCN1A-212ENST00000636194 BSCL2Q96G97 398 aaPredicted RBP5.96□□□□□ -1.46
SCN1A-212ENST00000636194 ZNF668Q96K58 619 aaPredicted RBP5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms