RNA–Protein interactions for RNA: ENST00000635562.1

PSPC1-208, Transcript of paraspeckle component 1, humanhuman

TSL 3

Gene PSPC1, Length 422 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-208ENST00000635562 CLCNKBP51801 687 aa2.95□□□□□ -1.94
PSPC1-208ENST00000635562 OAZ1P54368 228 aa2.95□□□□□ -1.94
PSPC1-208ENST00000635562 MFAP3P55082 362 aa2.95□□□□□ -1.94
PSPC1-208ENST00000635562 TAS2R40P59535 323 aa2.95□□□□□ -1.94
PSPC1-208ENST00000635562 KRTAP10-9P60411 292 aa2.95□□□□□ -1.94
PSPC1-208ENST00000635562 MYL6P60660 151 aa2.95□□□□□ -1.94
PSPC1-208ENST00000635562 SSTP61278 116 aa2.95□□□□□ -1.94
PSPC1-208ENST00000635562 RPL15P61313 204 aaKnown RBP2.95□□□□□ -1.94
PSPC1-208ENST00000635562 CYP4F2P78329 520 aa2.95□□□□□ -1.94
PSPC1-208ENST00000635562 TXNL4AP83876 142 aaKnown RBP2.95□□□□□ -1.94
PSPC1-208ENST00000635562 TLE3Q04726 772 aa2.95□□□□□ -1.94
PSPC1-208ENST00000635562 GAD2Q05329 585 aa2.95□□□□□ -1.94
PSPC1-208ENST00000635562 LIPEQ05469 1076 aa2.95□□□□□ -1.94
PSPC1-208ENST00000635562 HSPA14Q0VDF9 509 aa2.95□□□□□ -1.94
PSPC1-208ENST00000635562 DNAJC3Q13217 504 aa2.95□□□□□ -1.94
PSPC1-208ENST00000635562 BAATQ14032 418 aaPredicted RBP2.95□□□□□ -1.94
PSPC1-208ENST00000635562 CRYMQ14894 314 aa2.95□□□□□ -1.94
PSPC1-208ENST00000635562 NCF4Q15080 339 aa2.95□□□□□ -1.94
PSPC1-208ENST00000635562 MAPRE2Q15555 327 aa2.95□□□□□ -1.94
PSPC1-208ENST00000635562 ZRSR1Q15695 479 aaKnown RBP2.95□□□□□ -1.94
PSPC1-208ENST00000635562 BCL2A1Q16548 175 aa2.95□□□□□ -1.94
PSPC1-208ENST00000635562 HYAL4Q2M3T9 481 aa2.95□□□□□ -1.94
PSPC1-208ENST00000635562 TBRG1Q3YBR2 411 aa2.95□□□□□ -1.94
PSPC1-208ENST00000635562 Q3ZCU0 254 aa2.95□□□□□ -1.94
PSPC1-208ENST00000635562 ATAD3BQ5T9A4 648 aa2.95□□□□□ -1.94
PSPC1-208ENST00000635562 RNASEH2BQ5TBB1 312 aaKnown RBP2.95□□□□□ -1.94
PSPC1-208ENST00000635562 CST9LP1Q5W188 147 aa2.95□□□□□ -1.94
PSPC1-208ENST00000635562 DENND2CQ68D51 928 aa2.95□□□□□ -1.94
PSPC1-208ENST00000635562 ATL3Q6DD88 541 aa2.95□□□□□ -1.94
PSPC1-208ENST00000635562 PSRC1Q6PGN9 363 aaPredicted RBP2.95□□□□□ -1.94
PSPC1-208ENST00000635562 NCEH1Q6PIU2 408 aa2.95□□□□□ -1.94
PSPC1-208ENST00000635562 AFTPHQ6ULP2 937 aa2.95□□□□□ -1.94
PSPC1-208ENST00000635562 ERN2Q76MJ5 926 aaKnown RBP2.95□□□□□ -1.94
PSPC1-208ENST00000635562 RRAGAQ7L523 313 aa2.95□□□□□ -1.94
PSPC1-208ENST00000635562 BCDIN3DQ7Z5W3 292 aaKnown RBP2.95□□□□□ -1.94
PSPC1-208ENST00000635562 GPR142Q7Z601 462 aa2.95□□□□□ -1.94
PSPC1-208ENST00000635562 TMCO2Q7Z6W1 182 aaPredicted RBP2.95□□□□□ -1.94
PSPC1-208ENST00000635562 ZSCAN2Q7Z7L9 614 aaPredicted RBP2.95□□□□□ -1.94
PSPC1-208ENST00000635562 FAM114A1Q8IWE2 563 aa2.95□□□□□ -1.94
PSPC1-208ENST00000635562 ARFGAP2Q8N6H7 521 aa2.95□□□□□ -1.94
PSPC1-208ENST00000635562 NEK11Q8NG66 645 aa2.95□□□□□ -1.94
PSPC1-208ENST00000635562 OR52L2PQ8NGH6 319 aa2.95□□□□□ -1.94
PSPC1-208ENST00000635562 CLHC1Q8NHS4 586 aa2.95□□□□□ -1.94
PSPC1-208ENST00000635562 PSMA8Q8TAA3 256 aa2.95□□□□□ -1.94
PSPC1-208ENST00000635562 HMGB4Q8WW32 186 aa2.95□□□□□ -1.94
PSPC1-208ENST00000635562 CPT1BQ92523 772 aa2.95□□□□□ -1.94
PSPC1-208ENST00000635562 MRPS27Q92552 414 aaKnown RBP2.95□□□□□ -1.94
PSPC1-208ENST00000635562 NT5C3BQ969T7 300 aa2.95□□□□□ -1.94
PSPC1-208ENST00000635562 TMEM186Q96B77 213 aa2.95□□□□□ -1.94
PSPC1-208ENST00000635562 C3orf49Q96BT1 292 aa2.95□□□□□ -1.94
PSPC1-208ENST00000635562 EFHD2Q96C19 240 aaPredicted RBP2.95□□□□□ -1.94
PSPC1-208ENST00000635562 PHF21BQ96EK2 531 aa2.95□□□□□ -1.94
PSPC1-208ENST00000635562 SLC47A1Q96FL8 570 aa2.95□□□□□ -1.94
PSPC1-208ENST00000635562 ERO1AQ96HE7 468 aa2.95□□□□□ -1.94
PSPC1-208ENST00000635562 RBM17Q96I25 401 aaKnown RBP2.95□□□□□ -1.94
PSPC1-208ENST00000635562 REXO5Q96IC2 774 aaKnown RBP2.95□□□□□ -1.94
PSPC1-208ENST00000635562 TPD52L3Q96J77 140 aa2.95□□□□□ -1.94
PSPC1-208ENST00000635562 FAR2Q96K12 515 aa2.95□□□□□ -1.94
PSPC1-208ENST00000635562 CAMK1GQ96NX5 476 aa2.95□□□□□ -1.94
PSPC1-208ENST00000635562 NR1H4Q96RI1 486 aaPredicted RBP2.95□□□□□ -1.94
PSPC1-208ENST00000635562 SMC6Q96SB8 1091 aa2.95□□□□□ -1.94
PSPC1-208ENST00000635562 FIZ1Q96SL8 496 aa2.95□□□□□ -1.94
PSPC1-208ENST00000635562 PLIN2Q99541 437 aa2.95□□□□□ -1.94
PSPC1-208ENST00000635562 EIF3CQ99613 913 aaKnown RBP2.95□□□□□ -1.94
PSPC1-208ENST00000635562 SH3GL3Q99963 347 aa2.95□□□□□ -1.94
PSPC1-208ENST00000635562 MTG1Q9BT17 334 aaPredicted RBP2.95□□□□□ -1.94
PSPC1-208ENST00000635562 SLC25A23Q9BV35 468 aa2.95□□□□□ -1.94
PSPC1-208ENST00000635562 TRIM62Q9BVG3 475 aa2.95□□□□□ -1.94
PSPC1-208ENST00000635562 PHF7Q9BWX1 381 aaPredicted RBP2.95□□□□□ -1.94
PSPC1-208ENST00000635562 CARD6Q9BX69 1037 aa2.95□□□□□ -1.94
PSPC1-208ENST00000635562 CACNG6Q9BXT2 260 aa2.95□□□□□ -1.94
PSPC1-208ENST00000635562 RNF26Q9BY78 433 aaPredicted RBP2.95□□□□□ -1.94
PSPC1-208ENST00000635562 RAB33BQ9H082 229 aa2.95□□□□□ -1.94
PSPC1-208ENST00000635562 SLC25A18Q9H1K4 315 aa2.95□□□□□ -1.94
PSPC1-208ENST00000635562 CDCP1Q9H5V8 836 aa2.95□□□□□ -1.94
PSPC1-208ENST00000635562 AZI2Q9H6S1 392 aa2.95□□□□□ -1.94
PSPC1-208ENST00000635562 SH2D4AQ9H788 454 aa2.95□□□□□ -1.94
PSPC1-208ENST00000635562 LY9Q9HBG7 655 aa2.95□□□□□ -1.94
PSPC1-208ENST00000635562 SPACA1Q9HBV2 294 aa2.95□□□□□ -1.94
PSPC1-208ENST00000635562 AGPAT3Q9NRZ7 376 aa2.95□□□□□ -1.94
PSPC1-208ENST00000635562 LIN7CQ9NUP9 197 aaKnown RBP2.95□□□□□ -1.94
PSPC1-208ENST00000635562 AGPAT5Q9NUQ2 364 aa2.95□□□□□ -1.94
PSPC1-208ENST00000635562 NUDT15Q9NV35 164 aa2.95□□□□□ -1.94
PSPC1-208ENST00000635562 FBXO28Q9NVF7 368 aa2.95□□□□□ -1.94
PSPC1-208ENST00000635562 ANKMY1Q9P2S6 941 aa2.95□□□□□ -1.94
PSPC1-208ENST00000635562 SPASTQ9UBP0 616 aa2.95□□□□□ -1.94
PSPC1-208ENST00000635562 SLCO3A1Q9UIG8 710 aa2.95□□□□□ -1.94
PSPC1-208ENST00000635562 ADAM21Q9UKJ8 722 aa2.95□□□□□ -1.94
PSPC1-208ENST00000635562 INTS6Q9UL03 887 aaKnown RBP2.95□□□□□ -1.94
PSPC1-208ENST00000635562 RCE1Q9Y256 329 aa2.95□□□□□ -1.94
PSPC1-208ENST00000635562 KCNK7Q9Y2U2 307 aa2.95□□□□□ -1.94
PSPC1-208ENST00000635562 MRPS2Q9Y399 296 aaKnown RBP2.95□□□□□ -1.94
PSPC1-208ENST00000635562 SPACA6W5XKT8 324 aa2.95□□□□□ -1.94
PSPC1-208ENST00000635562 COL3A1P02461 1466 aaPredicted RBP2.95□□□□□ -1.94
PSPC1-208ENST00000635562 PHLPP2Q6ZVD8 1323 aa2.94□□□□□ -1.94
PSPC1-208ENST00000635562 C15orf38-AP3S2A0A0A6YYH1 394 aa2.94□□□□□ -1.94
PSPC1-208ENST00000635562 LOC100506127A0A0U1RQW1 187 aa2.94□□□□□ -1.94
PSPC1-208ENST00000635562 IQANK1A0A1B0GTG1 560 aa2.94□□□□□ -1.94
PSPC1-208ENST00000635562 TCRBV5S1A1TA0A578 114 aa2.94□□□□□ -1.94
PSPC1-208ENST00000635562 TCRBV21S2A2A0A5A6 115 aa2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms