RNA–Protein interactions for RNA: ENST00000629380.2

SYNGAP1-208, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SYNGAP1, Length 9,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-208ENST00000629380 LINGO2Q7L985 606 aa13.06□□□□□ -0.32
SYNGAP1-208ENST00000629380 PCDH20Q8N6Y1 951 aaKnown RBP13.06□□□□□ -0.32
SYNGAP1-208ENST00000629380 ACSS3Q9H6R3 686 aa13.06□□□□□ -0.32
SYNGAP1-208ENST00000629380 CAPN15O75808 1086 aa13.06□□□□□ -0.32
SYNGAP1-208ENST00000629380 APODP05090 189 aa13.06□□□□□ -0.32
SYNGAP1-208ENST00000629380 SLC6A9P48067 706 aa13.06□□□□□ -0.32
SYNGAP1-208ENST00000629380 NAGLUP54802 743 aa13.06□□□□□ -0.32
SYNGAP1-208ENST00000629380 POU5F1Q01860 360 aaKnown RBP13.06□□□□□ -0.32
SYNGAP1-208ENST00000629380 OGFRL1Q5TC84 451 aaPredicted RBP13.06□□□□□ -0.32
SYNGAP1-208ENST00000629380 CPNE9Q8IYJ1 553 aa13.06□□□□□ -0.32
SYNGAP1-208ENST00000629380 CPSF7Q8N684 471 aaKnown RBP13.06□□□□□ -0.32
SYNGAP1-208ENST00000629380 LRTM1Q9HBL6 345 aa13.06□□□□□ -0.32
SYNGAP1-208ENST00000629380 MIOSQ9NXC5 875 aa13.06□□□□□ -0.32
SYNGAP1-208ENST00000629380 KCTD5Q9NXV2 234 aa13.06□□□□□ -0.32
SYNGAP1-208ENST00000629380 APLP1P51693 650 aa13.06□□□□□ -0.32
SYNGAP1-208ENST00000629380 SF1Q15637 639 aaKnown RBP13.06□□□□□ -0.32
SYNGAP1-208ENST00000629380 CAND1Q86VP6 1230 aaKnown RBP13.06□□□□□ -0.32
SYNGAP1-208ENST00000629380 PORCNQ9H237 461 aa13.06□□□□□ -0.32
SYNGAP1-208ENST00000629380 C11orf16Q9NQ32 467 aa13.06□□□□□ -0.32
SYNGAP1-208ENST00000629380 LGALS2P05162 132 aa13.06□□□□□ -0.32
SYNGAP1-208ENST00000629380 SRPRAP08240 638 aaKnown RBP13.06□□□□□ -0.32
SYNGAP1-208ENST00000629380 ACVR2AP27037 513 aa13.06□□□□□ -0.32
SYNGAP1-208ENST00000629380 MPP5Q8N3R9 675 aa13.06□□□□□ -0.32
SYNGAP1-208ENST00000629380 ZBTB2Q8N680 514 aa13.06□□□□□ -0.32
SYNGAP1-208ENST00000629380 SENP8Q96LD8 212 aa13.06□□□□□ -0.32
SYNGAP1-208ENST00000629380 ZSWIM3Q96MP5 696 aa13.06□□□□□ -0.32
SYNGAP1-208ENST00000629380 COPS8Q99627 209 aa13.06□□□□□ -0.32
SYNGAP1-208ENST00000629380 WASF3Q9UPY6 502 aa13.06□□□□□ -0.32
SYNGAP1-208ENST00000629380 COL1A2P08123 1366 aa13.06□□□□□ -0.32
SYNGAP1-208ENST00000629380 FAM186AA6NE01 2351 aa13.06□□□□□ -0.32
SYNGAP1-208ENST00000629380 CLDN25C9JDP6 229 aa13.05□□□□□ -0.32
SYNGAP1-208ENST00000629380 TLL1O43897 1013 aa13.05□□□□□ -0.32
SYNGAP1-208ENST00000629380 PRAMEF12O95522 483 aa13.05□□□□□ -0.32
SYNGAP1-208ENST00000629380 RORCP51449 518 aa13.05□□□□□ -0.32
SYNGAP1-208ENST00000629380 VMACQ2NL98 169 aa13.05□□□□□ -0.32
SYNGAP1-208ENST00000629380 PDCD4Q53EL6 469 aaKnown RBP13.05□□□□□ -0.32
SYNGAP1-208ENST00000629380 RAP1GAP2Q684P5 730 aa13.05□□□□□ -0.32
SYNGAP1-208ENST00000629380 MSANTD2Q6P1R3 559 aa13.05□□□□□ -0.32
SYNGAP1-208ENST00000629380 FAM183BPQ6ZVS7 135 aa13.05□□□□□ -0.32
SYNGAP1-208ENST00000629380 NSMCE3Q96MG7 304 aa13.05□□□□□ -0.32
SYNGAP1-208ENST00000629380 ZNF347Q96SE7 839 aa13.05□□□□□ -0.32
SYNGAP1-208ENST00000629380 KXD1Q9BQD3 176 aa13.05□□□□□ -0.32
SYNGAP1-208ENST00000629380 MAU2Q9Y6X3 613 aa13.05□□□□□ -0.32
SYNGAP1-208ENST00000629380 E7ENX8 843 aa13.05□□□□□ -0.32
SYNGAP1-208ENST00000629380 B3GALT2O43825 422 aa13.05□□□□□ -0.32
SYNGAP1-208ENST00000629380 IPO13O94829 963 aaKnown RBP13.05□□□□□ -0.32
SYNGAP1-208ENST00000629380 PGAM2P15259 253 aa13.05□□□□□ -0.32
SYNGAP1-208ENST00000629380 TMEM119Q4V9L6 283 aa13.05□□□□□ -0.32
SYNGAP1-208ENST00000629380 DNM1P34Q6PK57 102 aa13.05□□□□□ -0.32
SYNGAP1-208ENST00000629380 TMEM161BQ8NDZ6 487 aa13.05□□□□□ -0.32
SYNGAP1-208ENST00000629380 FBXO22Q8NEZ5 403 aa13.05□□□□□ -0.32
SYNGAP1-208ENST00000629380 SUN5Q8TC36 379 aa13.05□□□□□ -0.32
SYNGAP1-208ENST00000629380 RBM18Q96H35 190 aaKnown RBP13.05□□□□□ -0.32
SYNGAP1-208ENST00000629380 LRRC72A6NJI9 287 aa13.05□□□□□ -0.32
SYNGAP1-208ENST00000629380 TSPAN4O14817 238 aa13.05□□□□□ -0.32
SYNGAP1-208ENST00000629380 ZNF823P16415 610 aa13.05□□□□□ -0.32
SYNGAP1-208ENST00000629380 MAZP56270 477 aaKnown RBP13.05□□□□□ -0.32
SYNGAP1-208ENST00000629380 IFI35P80217 286 aaPredicted RBP13.05□□□□□ -0.32
SYNGAP1-208ENST00000629380 CELF3Q5SZQ8 465 aaKnown RBP13.05□□□□□ -0.32
SYNGAP1-208ENST00000629380 P2RY8Q86VZ1 359 aa13.05□□□□□ -0.32
SYNGAP1-208ENST00000629380 RAB2BQ8WUD1 216 aa13.05□□□□□ -0.32
SYNGAP1-208ENST00000629380 SNX15Q9NRS6 342 aa13.05□□□□□ -0.32
SYNGAP1-208ENST00000629380 KIAA1522Q9P206 1035 aaPredicted RBP13.05□□□□□ -0.32
SYNGAP1-208ENST00000629380 KNDC1Q76NI1 1749 aa13.05□□□□□ -0.32
SYNGAP1-208ENST00000629380 C5orf51A6NDU8 294 aa13.05□□□□□ -0.32
SYNGAP1-208ENST00000629380 A8MX80 341 aa13.05□□□□□ -0.32
SYNGAP1-208ENST00000629380 LIASO43766 372 aa13.05□□□□□ -0.32
SYNGAP1-208ENST00000629380 GJA1P17302 382 aa13.05□□□□□ -0.32
SYNGAP1-208ENST00000629380 CMPK1P30085 196 aa13.05□□□□□ -0.32
SYNGAP1-208ENST00000629380 DNAJA1P31689 397 aaKnown RBP13.05□□□□□ -0.32
SYNGAP1-208ENST00000629380 CNDP2Q96KP4 475 aaKnown RBP13.05□□□□□ -0.32
SYNGAP1-208ENST00000629380 DNAJC28Q9NX36 388 aa13.05□□□□□ -0.32
SYNGAP1-208ENST00000629380 RAB21Q9UL25 225 aa13.05□□□□□ -0.32
SYNGAP1-208ENST00000629380 RARAP10276 462 aa13.05□□□□□ -0.32
SYNGAP1-208ENST00000629380 GNPDA1P46926 289 aa13.05□□□□□ -0.32
SYNGAP1-208ENST00000629380 OR3A3P47888 321 aa13.05□□□□□ -0.32
SYNGAP1-208ENST00000629380 OR3A2P47893 321 aa13.05□□□□□ -0.32
SYNGAP1-208ENST00000629380 CASP9P55211 416 aa13.05□□□□□ -0.32
SYNGAP1-208ENST00000629380 FRMD7Q6ZUT3 714 aa13.05□□□□□ -0.32
SYNGAP1-208ENST00000629380 HSFY1Q96LI6 401 aa13.05□□□□□ -0.32
SYNGAP1-208ENST00000629380 TELO2Q9Y4R8 837 aa13.05□□□□□ -0.32
SYNGAP1-208ENST00000629380 NT5DC1Q5TFE4 455 aa13.05□□□□□ -0.32
SYNGAP1-208ENST00000629380 AHSA2Q719I0 299 aa13.05□□□□□ -0.32
SYNGAP1-208ENST00000629380 TTLQ8NG68 377 aa13.05□□□□□ -0.32
SYNGAP1-208ENST00000629380 SUN3Q8TAQ9 357 aa13.05□□□□□ -0.32
SYNGAP1-208ENST00000629380 GFM1Q96RP9 751 aaKnown RBP13.05□□□□□ -0.32
SYNGAP1-208ENST00000629380 ARHGEF4Q9NR80 690 aa13.05□□□□□ -0.32
SYNGAP1-208ENST00000629380 PLGP00747 810 aaPredicted RBP13.05□□□□□ -0.32
SYNGAP1-208ENST00000629380 POM121L1PQ3SYA9 428 aa13.05□□□□□ -0.32
SYNGAP1-208ENST00000629380 TTMPQ5BVD1 217 aa13.05□□□□□ -0.32
SYNGAP1-208ENST00000629380 BRMS1LQ5PSV4 323 aa13.05□□□□□ -0.32
SYNGAP1-208ENST00000629380 C9orf64Q5T6V5 341 aa13.05□□□□□ -0.32
SYNGAP1-208ENST00000629380 TUBGCP5Q96RT8 1024 aa13.05□□□□□ -0.32
SYNGAP1-208ENST00000629380 PCDH10Q9P2E7 1040 aa13.05□□□□□ -0.32
SYNGAP1-208ENST00000629380 PTCH2Q9Y6C5 1203 aa13.05□□□□□ -0.32
SYNGAP1-208ENST00000629380 SCN2AQ99250 2005 aa13.05□□□□□ -0.32
SYNGAP1-208ENST00000629380 TPD52L2O43399 206 aaKnown RBP13.05□□□□□ -0.32
SYNGAP1-208ENST00000629380 CLDN9O95484 217 aa13.05□□□□□ -0.32
SYNGAP1-208ENST00000629380 MAPK12P53778 367 aa13.05□□□□□ -0.32
SYNGAP1-208ENST00000629380 ZC3H12AQ5D1E8 599 aaKnown RBP13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms