RNA–Protein interactions for RNA: ENST00000626236.2

SGMS1-211, Transcript of sphingomyelin synthase 1, humanhuman

TSL 1 (best)

Gene SGMS1, Length 1,013 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-211ENST00000626236 EPS8L3Q8TE67 593 aaKnown RBP8.39□□□□□ -1.07
SGMS1-211ENST00000626236 SLC44A1Q8WWI5 657 aa8.39□□□□□ -1.07
SGMS1-211ENST00000626236 FAM136AQ96C01 138 aa8.39□□□□□ -1.07
SGMS1-211ENST00000626236 VPS39Q96JC1 886 aa8.39□□□□□ -1.07
SGMS1-211ENST00000626236 ELMO2Q96JJ3 720 aa8.39□□□□□ -1.07
SGMS1-211ENST00000626236 ZNF514Q96K75 400 aaPredicted RBP8.39□□□□□ -1.07
SGMS1-211ENST00000626236 BIRC8Q96P09 236 aa8.39□□□□□ -1.07
SGMS1-211ENST00000626236 NDNQ99608 321 aa8.39□□□□□ -1.07
SGMS1-211ENST00000626236 RBBP8Q99708 897 aa8.39□□□□□ -1.07
SGMS1-211ENST00000626236 TSSK1BQ9BXA7 367 aa8.39□□□□□ -1.07
SGMS1-211ENST00000626236 RHOJQ9H4E5 214 aa8.39□□□□□ -1.07
SGMS1-211ENST00000626236 SMOC1Q9H4F8 434 aa8.39□□□□□ -1.07
SGMS1-211ENST00000626236 CAAP1Q9H8G2 361 aa8.39□□□□□ -1.07
SGMS1-211ENST00000626236 RMI1Q9H9A7 625 aa8.39□□□□□ -1.07
SGMS1-211ENST00000626236 TM7SF3Q9NS93 570 aa8.39□□□□□ -1.07
SGMS1-211ENST00000626236 GMEB2Q9UKD1 530 aa8.39□□□□□ -1.07
SGMS1-211ENST00000626236 GPR34Q9UPC5 381 aa8.39□□□□□ -1.07
SGMS1-211ENST00000626236 PLAAQ9Y263 795 aa8.39□□□□□ -1.07
SGMS1-211ENST00000626236 PCDHB1Q9Y5F3 818 aa8.39□□□□□ -1.07
SGMS1-211ENST00000626236 PCDHGA5Q9Y5G8 931 aa8.39□□□□□ -1.07
SGMS1-211ENST00000626236 PCYT1BQ9Y5K3 369 aaPredicted RBP8.39□□□□□ -1.07
SGMS1-211ENST00000626236 SNX11Q9Y5W9 270 aa8.39□□□□□ -1.07
SGMS1-211ENST00000626236 FAM95CA0A1B0GW59 222 aa8.38□□□□□ -1.07
SGMS1-211ENST00000626236 IQCF5A8MTL0 148 aa8.38□□□□□ -1.07
SGMS1-211ENST00000626236 E5RI56 91 aa8.38□□□□□ -1.07
SGMS1-211ENST00000626236 F8W8V4 182 aa8.38□□□□□ -1.07
SGMS1-211ENST00000626236 H3BMM5 538 aa8.38□□□□□ -1.07
SGMS1-211ENST00000626236 QSOX1O00391 747 aa8.38□□□□□ -1.07
SGMS1-211ENST00000626236 NIPSNAP2O75323 286 aa8.38□□□□□ -1.07
SGMS1-211ENST00000626236 POP7O75817 140 aaKnown RBP8.38□□□□□ -1.07
SGMS1-211ENST00000626236 FTH1P02794 183 aa8.38□□□□□ -1.07
SGMS1-211ENST00000626236 CSF2P04141 144 aa8.38□□□□□ -1.07
SGMS1-211ENST00000626236 RETP07949 1114 aa8.38□□□□□ -1.07
SGMS1-211ENST00000626236 ITGA2BP08514 1039 aa8.38□□□□□ -1.07
SGMS1-211ENST00000626236 ACP5P13686 325 aa8.38□□□□□ -1.07
SGMS1-211ENST00000626236 JUNDP17535 347 aa8.38□□□□□ -1.07
SGMS1-211ENST00000626236 CHRM3P20309 590 aa8.38□□□□□ -1.07
SGMS1-211ENST00000626236 GCAP28676 217 aa8.38□□□□□ -1.07
SGMS1-211ENST00000626236 SPRP35270 261 aaPredicted RBP8.38□□□□□ -1.07
SGMS1-211ENST00000626236 NBL1P41271 181 aa8.38□□□□□ -1.07
SGMS1-211ENST00000626236 SLCO1A2P46721 670 aa8.38□□□□□ -1.07
SGMS1-211ENST00000626236 PRLHRP49683 370 aa8.38□□□□□ -1.07
SGMS1-211ENST00000626236 HK3P52790 923 aa8.38□□□□□ -1.07
SGMS1-211ENST00000626236 LIMK2P53671 638 aa8.38□□□□□ -1.07
SGMS1-211ENST00000626236 ADARP55265 1226 aaKnown RBP8.38□□□□□ -1.07
SGMS1-211ENST00000626236 GRIK2Q13002 908 aa8.38□□□□□ -1.07
SGMS1-211ENST00000626236 BMPR2Q13873 1038 aa8.38□□□□□ -1.07
SGMS1-211ENST00000626236 INSCQ1MX18 579 aa8.38□□□□□ -1.07
SGMS1-211ENST00000626236 BCL7AQ4VC05 210 aa8.38□□□□□ -1.07
SGMS1-211ENST00000626236 SYTL3Q4VX76 610 aa8.38□□□□□ -1.07
SGMS1-211ENST00000626236 PYCR3Q53H96 274 aa8.38□□□□□ -1.07
SGMS1-211ENST00000626236 PRAMEF14Q5SWL7 426 aa8.38□□□□□ -1.07
SGMS1-211ENST00000626236 RBM20Q5T481 1227 aaKnown RBP8.38□□□□□ -1.07
SGMS1-211ENST00000626236 MROH9Q5TGP6 573 aa8.38□□□□□ -1.07
SGMS1-211ENST00000626236 HECTD2Q5U5R9 776 aa8.38□□□□□ -1.07
SGMS1-211ENST00000626236 TCEAL6Q6IPX3 200 aa8.38□□□□□ -1.07
SGMS1-211ENST00000626236 FAM45BPQ6NSW5 357 aa8.38□□□□□ -1.07
SGMS1-211ENST00000626236 SLC23A3Q6PIS1 610 aa8.38□□□□□ -1.07
SGMS1-211ENST00000626236 TAOK1Q7L7X3 1001 aa8.38□□□□□ -1.07
SGMS1-211ENST00000626236 ZNF547Q8IVP9 402 aa8.38□□□□□ -1.07
SGMS1-211ENST00000626236 PHACTR4Q8IZ21 702 aa8.38□□□□□ -1.07
SGMS1-211ENST00000626236 SUMF1Q8NBK3 374 aa8.38□□□□□ -1.07
SGMS1-211ENST00000626236 ACVR1CQ8NER5 493 aa8.38□□□□□ -1.07
SGMS1-211ENST00000626236 FAM45AQ8TCE6 357 aa8.38□□□□□ -1.07
SGMS1-211ENST00000626236 LKAAEAR1Q8TD35 194 aa8.38□□□□□ -1.07
SGMS1-211ENST00000626236 DCAKDQ8WVC6 231 aa8.38□□□□□ -1.07
SGMS1-211ENST00000626236 TCEAL3Q969E4 200 aa8.38□□□□□ -1.07
SGMS1-211ENST00000626236 ZBTB9Q96C00 473 aa8.38□□□□□ -1.07
SGMS1-211ENST00000626236 SCARF2Q96GP6 870 aaPredicted RBP8.38□□□□□ -1.07
SGMS1-211ENST00000626236 ZIM3Q96PE6 472 aa8.38□□□□□ -1.07
SGMS1-211ENST00000626236 PANX3Q96QZ0 392 aa8.38□□□□□ -1.07
SGMS1-211ENST00000626236 OR2M4Q96R27 311 aa8.38□□□□□ -1.07
SGMS1-211ENST00000626236 CCM2Q9BSQ5 444 aa8.38□□□□□ -1.07
SGMS1-211ENST00000626236 MCMBPQ9BTE3 642 aa8.38□□□□□ -1.07
SGMS1-211ENST00000626236 AARSD1Q9BTE6 412 aaKnown RBP8.38□□□□□ -1.07
SGMS1-211ENST00000626236 DHRS4Q9BTZ2 278 aa8.38□□□□□ -1.07
SGMS1-211ENST00000626236 NUSAP1Q9BXS6 441 aaKnown RBP8.38□□□□□ -1.07
SGMS1-211ENST00000626236 SLC13A1Q9BZW2 595 aa8.38□□□□□ -1.07
SGMS1-211ENST00000626236 TCEAL2Q9H3H9 227 aaPredicted RBP8.38□□□□□ -1.07
SGMS1-211ENST00000626236 CAPN10Q9HC96 672 aa8.38□□□□□ -1.07
SGMS1-211ENST00000626236 PSMC3IPQ9P2W1 217 aaPredicted RBP8.38□□□□□ -1.07
SGMS1-211ENST00000626236 NCDNQ9UBB6 729 aa8.38□□□□□ -1.07
SGMS1-211ENST00000626236 FAM8A1Q9UBU6 413 aa8.38□□□□□ -1.07
SGMS1-211ENST00000626236 FETUBQ9UGM5 382 aa8.38□□□□□ -1.07
SGMS1-211ENST00000626236 APOBEC3BQ9UH17 382 aaKnown RBP8.38□□□□□ -1.07
SGMS1-211ENST00000626236 SLC24A2Q9UI40 661 aa8.38□□□□□ -1.07
SGMS1-211ENST00000626236 KLF15Q9UIH9 416 aa8.38□□□□□ -1.07
SGMS1-211ENST00000626236 SLC39A10Q9ULF5 831 aa8.38□□□□□ -1.07
SGMS1-211ENST00000626236 CORO1CQ9ULV4 474 aaPredicted RBP8.38□□□□□ -1.07
SGMS1-211ENST00000626236 SLC6A14Q9UN76 642 aa8.38□□□□□ -1.07
SGMS1-211ENST00000626236 DNAJC16Q9Y2G8 782 aa8.38□□□□□ -1.07
SGMS1-211ENST00000626236 MTO1Q9Y2Z2 717 aaKnown RBP8.38□□□□□ -1.07
SGMS1-211ENST00000626236 PLEKHM1Q9Y4G2 1056 aa8.38□□□□□ -1.07
SGMS1-211ENST00000626236 COMMD10Q9Y6G5 202 aa8.38□□□□□ -1.07
SGMS1-211ENST00000626236 DGKBQ9Y6T7 804 aa8.38□□□□□ -1.07
SGMS1-211ENST00000626236 PI4KAP42356 2102 aa8.38□□□□□ -1.07
SGMS1-211ENST00000626236 TLDC2A0PJX2 215 aa8.37□□□□□ -1.07
SGMS1-211ENST00000626236 H3BM21 787 aa8.37□□□□□ -1.07
SGMS1-211ENST00000626236 RASGRF2O14827 1237 aa8.37□□□□□ -1.07
SGMS1-211ENST00000626236 KHNYNO15037 678 aaKnown RBP8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms