RNA–Protein interactions for RNA: ENST00000626000.1

SNRPA1-216, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5 BASIC

Gene SNRPA1, Length 539 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-216ENST00000626000 VIPP01282 170 aa13.76□□□□□ -0.21
SNRPA1-216ENST00000626000 RPLP0P05388 317 aaKnown RBP13.76□□□□□ -0.21
SNRPA1-216ENST00000626000 SLC35G4P0C7Q5 338 aa13.76□□□□□ -0.21
SNRPA1-216ENST00000626000 OR56A5P0C7T3 313 aa13.76□□□□□ -0.21
SNRPA1-216ENST00000626000 MGAT1P26572 445 aa13.76□□□□□ -0.21
SNRPA1-216ENST00000626000 NDUFS1P28331 727 aa13.76□□□□□ -0.21
SNRPA1-216ENST00000626000 MAZP56270 477 aaKnown RBP13.76□□□□□ -0.21
SNRPA1-216ENST00000626000 ISXQ2M1V0 245 aa13.76□□□□□ -0.21
SNRPA1-216ENST00000626000 PERM1Q5SV97 790 aa13.76□□□□□ -0.21
SNRPA1-216ENST00000626000 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.76□□□□□ -0.21
SNRPA1-216ENST00000626000 ZNF648Q5T619 568 aaPredicted RBP13.76□□□□□ -0.21
SNRPA1-216ENST00000626000 METRNLQ641Q3 311 aa13.76□□□□□ -0.21
SNRPA1-216ENST00000626000 KIAA0930Q6ICG6 404 aaPredicted RBP13.76□□□□□ -0.21
SNRPA1-216ENST00000626000 KLHL35Q6PF15 583 aa13.76□□□□□ -0.21
SNRPA1-216ENST00000626000 UNQ6494/PRO21346Q6UXR6 183 aa13.76□□□□□ -0.21
SNRPA1-216ENST00000626000 JAMLQ86YT9 394 aa13.76□□□□□ -0.21
SNRPA1-216ENST00000626000 KLHL7Q8IXQ5 586 aa13.76□□□□□ -0.21
SNRPA1-216ENST00000626000 ZFPM2Q8WW38 1151 aa13.76□□□□□ -0.21
SNRPA1-216ENST00000626000 CXorf40BQ96DE9 158 aa13.76□□□□□ -0.21
SNRPA1-216ENST00000626000 SGF29Q96ES7 293 aa13.76□□□□□ -0.21
SNRPA1-216ENST00000626000 SERPINB12Q96P63 405 aa13.76□□□□□ -0.21
SNRPA1-216ENST00000626000 TCF12Q99081 682 aa13.76□□□□□ -0.21
SNRPA1-216ENST00000626000 CAAP1Q9H8G2 361 aa13.76□□□□□ -0.21
SNRPA1-216ENST00000626000 CHRAC1Q9NRG0 131 aa13.76□□□□□ -0.21
SNRPA1-216ENST00000626000 KCNK4Q9NYG8 393 aa13.76□□□□□ -0.21
SNRPA1-216ENST00000626000 DNAJC16Q9Y2G8 782 aa13.76□□□□□ -0.21
SNRPA1-216ENST00000626000 ASXL3Q9C0F0 2248 aa13.75□□□□□ -0.21
SNRPA1-216ENST00000626000 RP1P56715 2156 aa13.75□□□□□ -0.21
SNRPA1-216ENST00000626000 CEP295Q9C0D2 2601 aa13.75□□□□□ -0.21
SNRPA1-216ENST00000626000 FAM187AA6NFU0 413 aa13.75□□□□□ -0.21
SNRPA1-216ENST00000626000 LIN7AO14910 233 aaPredicted RBP13.75□□□□□ -0.21
SNRPA1-216ENST00000626000 KPNA5O15131 536 aa13.75□□□□□ -0.21
SNRPA1-216ENST00000626000 GPR39O43194 453 aa13.75□□□□□ -0.21
SNRPA1-216ENST00000626000 CSO75390 466 aaKnown RBP13.75□□□□□ -0.21
SNRPA1-216ENST00000626000 TTC4O95801 387 aa13.75□□□□□ -0.21
SNRPA1-216ENST00000626000 MYF5P13349 255 aa13.75□□□□□ -0.21
SNRPA1-216ENST00000626000 CCKBRP32239 447 aa13.75□□□□□ -0.21
SNRPA1-216ENST00000626000 MAGEA3P43357 314 aa13.75□□□□□ -0.21
SNRPA1-216ENST00000626000 ARSDP51689 593 aa13.75□□□□□ -0.21
SNRPA1-216ENST00000626000 CTSCP53634 463 aa13.75□□□□□ -0.21
SNRPA1-216ENST00000626000 TARDBPQ13148 414 aaKnown RBP eCLIP13.75□□□□□ -0.21
SNRPA1-216ENST00000626000 TRA2AQ13595 282 aaKnown RBP eCLIP13.75□□□□□ -0.21
SNRPA1-216ENST00000626000 DBN1Q16643 649 aa13.75□□□□□ -0.21
SNRPA1-216ENST00000626000 PLA2G4EQ3MJ16 856 aa13.75□□□□□ -0.21
SNRPA1-216ENST00000626000 MAP9Q49MG5 647 aa13.75□□□□□ -0.21
SNRPA1-216ENST00000626000 RNASEH2BQ5TBB1 312 aaKnown RBP13.75□□□□□ -0.21
SNRPA1-216ENST00000626000 ZNF534Q76KX8 674 aa13.75□□□□□ -0.21
SNRPA1-216ENST00000626000 DET1Q7L5Y6 550 aa13.75□□□□□ -0.21
SNRPA1-216ENST00000626000 PIM3Q86V86 326 aa13.75□□□□□ -0.21
SNRPA1-216ENST00000626000 PDIK1LQ8N165 341 aa13.75□□□□□ -0.21
SNRPA1-216ENST00000626000 CALML6Q8TD86 181 aa13.75□□□□□ -0.21
SNRPA1-216ENST00000626000 LRRC39Q96DD0 335 aa13.75□□□□□ -0.21
SNRPA1-216ENST00000626000 LIN37Q96GY3 246 aaPredicted RBP13.75□□□□□ -0.21
SNRPA1-216ENST00000626000 SNF8Q96H20 258 aa13.75□□□□□ -0.21
SNRPA1-216ENST00000626000 AHCYL2Q96HN2 611 aaKnown RBP13.75□□□□□ -0.21
SNRPA1-216ENST00000626000 SYNDIG1Q9H7V2 258 aa13.75□□□□□ -0.21
SNRPA1-216ENST00000626000 SYBUQ9NX95 663 aa13.75□□□□□ -0.21
SNRPA1-216ENST00000626000 SLC23A2Q9UGH3 650 aa13.75□□□□□ -0.21
SNRPA1-216ENST00000626000 PLEKHM1Q9Y4G2 1056 aa13.75□□□□□ -0.21
SNRPA1-216ENST00000626000 PCYT1BQ9Y5K3 369 aaPredicted RBP13.75□□□□□ -0.21
SNRPA1-216ENST00000626000 H3BMM5 538 aa13.74□□□□□ -0.21
SNRPA1-216ENST00000626000 IFRD1O00458 451 aaPredicted RBP13.74□□□□□ -0.21
SNRPA1-216ENST00000626000 CCL22O00626 93 aa13.74□□□□□ -0.21
SNRPA1-216ENST00000626000 CD3EAPO15446 510 aaKnown RBP13.74□□□□□ -0.21
SNRPA1-216ENST00000626000 KDM1AO60341 852 aa13.74□□□□□ -0.21
SNRPA1-216ENST00000626000 USP1O94782 785 aa13.74□□□□□ -0.21
SNRPA1-216ENST00000626000 TMEM63AO94886 807 aa13.74□□□□□ -0.21
SNRPA1-216ENST00000626000 POLBP06746 335 aa13.74□□□□□ -0.21
SNRPA1-216ENST00000626000 OGNP20774 298 aaKnown RBP13.74□□□□□ -0.21
SNRPA1-216ENST00000626000 ALDH4A1P30038 563 aa13.74□□□□□ -0.21
SNRPA1-216ENST00000626000 PTGIRP43119 386 aa13.74□□□□□ -0.21
SNRPA1-216ENST00000626000 CD151P48509 253 aa13.74□□□□□ -0.21
SNRPA1-216ENST00000626000 INHBCP55103 352 aa13.74□□□□□ -0.21
SNRPA1-216ENST00000626000 UBE2IP63279 158 aaKnown RBP13.74□□□□□ -0.21
SNRPA1-216ENST00000626000 B4GALNT1Q00973 533 aa13.74□□□□□ -0.21
SNRPA1-216ENST00000626000 RTP5Q14D33 572 aa13.74□□□□□ -0.21
SNRPA1-216ENST00000626000 IZUMO3Q5VZ72 239 aa13.74□□□□□ -0.21
SNRPA1-216ENST00000626000 IGF2-ASQ6U949 168 aa13.74□□□□□ -0.21
SNRPA1-216ENST00000626000 CAND1Q86VP6 1230 aaKnown RBP13.74□□□□□ -0.21
SNRPA1-216ENST00000626000 SPATA4Q8NEY3 305 aa13.74□□□□□ -0.21
SNRPA1-216ENST00000626000 GATA6Q92908 595 aa13.74□□□□□ -0.21
SNRPA1-216ENST00000626000 C16orf45Q96MC5 204 aaPredicted RBP13.74□□□□□ -0.21
SNRPA1-216ENST00000626000 PANX3Q96QZ0 392 aa13.74□□□□□ -0.21
SNRPA1-216ENST00000626000 ZMYND15Q9H091 742 aa13.74□□□□□ -0.21
SNRPA1-216ENST00000626000 FAM96AQ9H5X1 160 aa13.74□□□□□ -0.21
SNRPA1-216ENST00000626000 PRDM8Q9NQV8 689 aa13.74□□□□□ -0.21
SNRPA1-216ENST00000626000 COLEC10Q9Y6Z7 277 aa13.74□□□□□ -0.21
SNRPA1-216ENST00000626000 CCDC187A0A096LP49 1063 aa13.73□□□□□ -0.21
SNRPA1-216ENST00000626000 TCRBV7S3A2A0A539 114 aa13.73□□□□□ -0.21
SNRPA1-216ENST00000626000 CCDC78A2IDD5 438 aa13.73□□□□□ -0.21
SNRPA1-216ENST00000626000 PRMT5O14744 637 aaPredicted RBP13.73□□□□□ -0.21
SNRPA1-216ENST00000626000 PPM1DO15297 605 aa13.73□□□□□ -0.21
SNRPA1-216ENST00000626000 NDUFS3O75489 264 aa13.73□□□□□ -0.21
SNRPA1-216ENST00000626000 TOP3BO95985 862 aaKnown RBP13.73□□□□□ -0.21
SNRPA1-216ENST00000626000 PROS1P07225 676 aa13.73□□□□□ -0.21
SNRPA1-216ENST00000626000 PGAM1P18669 254 aa13.73□□□□□ -0.21
SNRPA1-216ENST00000626000 SPINK2P20155 84 aa13.73□□□□□ -0.21
SNRPA1-216ENST00000626000 PPM1FP49593 454 aaPredicted RBP13.73□□□□□ -0.21
SNRPA1-216ENST00000626000 ADARP55265 1226 aaKnown RBP13.73□□□□□ -0.21
SNRPA1-216ENST00000626000 CRADDP78560 199 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms