RNA–Protein interactions for RNA: ENST00000625883.1

CDR1-202, Transcript of cerebellar degeneration related protein 1, humanhuman

BASIC

Gene CDR1, Length 1,485 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR1-202ENST00000625883 OR5K3A6NET4 321 aa3.98□□□□□ -1.77
CDR1-202ENST00000625883 HEPACAM2A8MVW5 462 aa3.98□□□□□ -1.77
CDR1-202ENST00000625883 PROB1E7EW31 1015 aa3.98□□□□□ -1.77
CDR1-202ENST00000625883 TMEM178BH3BS89 294 aa3.98□□□□□ -1.77
CDR1-202ENST00000625883 SLC16A5O15375 505 aa3.98□□□□□ -1.77
CDR1-202ENST00000625883 PRAMEF11O60813 436 aa3.98□□□□□ -1.77
CDR1-202ENST00000625883 TADA2AO75478 443 aa3.98□□□□□ -1.77
CDR1-202ENST00000625883 SLCO2B1O94956 709 aa3.98□□□□□ -1.77
CDR1-202ENST00000625883 ALPLP05186 524 aa3.98□□□□□ -1.77
CDR1-202ENST00000625883 HLA-DOBP13765 273 aa3.98□□□□□ -1.77
CDR1-202ENST00000625883 ITGA2P17301 1181 aa3.98□□□□□ -1.77
CDR1-202ENST00000625883 GJA1P17302 382 aa3.98□□□□□ -1.77
CDR1-202ENST00000625883 CD81P60033 236 aa3.98□□□□□ -1.77
CDR1-202ENST00000625883 ISL1P61371 349 aa3.98□□□□□ -1.77
CDR1-202ENST00000625883 SEC61A1P61619 476 aaKnown RBP3.98□□□□□ -1.77
CDR1-202ENST00000625883 SNRPEP62304 92 aaKnown RBP3.98□□□□□ -1.77
CDR1-202ENST00000625883 LTBQ06643 244 aa3.98□□□□□ -1.77
CDR1-202ENST00000625883 TROAPQ12815 778 aa3.98□□□□□ -1.77
CDR1-202ENST00000625883 GAGE2BQ13066 116 aa3.98□□□□□ -1.77
CDR1-202ENST00000625883 GAGE2EQ4V326 116 aa3.98□□□□□ -1.77
CDR1-202ENST00000625883 KRBOX4Q5JUW0 171 aa3.98□□□□□ -1.77
CDR1-202ENST00000625883 FAM109BQ6ICB4 259 aaPredicted RBP3.98□□□□□ -1.77
CDR1-202ENST00000625883 KRT80Q6KB66 452 aa3.98□□□□□ -1.77
CDR1-202ENST00000625883 GAGE2AQ6NT46 116 aa3.98□□□□□ -1.77
CDR1-202ENST00000625883 TMPRSS12Q86WS5 348 aa3.98□□□□□ -1.77
CDR1-202ENST00000625883 ADHFE1Q8IWW8 467 aa3.98□□□□□ -1.77
CDR1-202ENST00000625883 IQCF1Q8N6M8 205 aa3.98□□□□□ -1.77
CDR1-202ENST00000625883 C1orf52Q8N6N3 182 aaKnown RBP3.98□□□□□ -1.77
CDR1-202ENST00000625883 TSPAN14Q8NG11 270 aa3.98□□□□□ -1.77
CDR1-202ENST00000625883 OR52I2Q8NH67 350 aa3.98□□□□□ -1.77
CDR1-202ENST00000625883 ZFAND2BQ8WV99 257 aa3.98□□□□□ -1.77
CDR1-202ENST00000625883 C16orf70Q9BSU1 422 aa3.98□□□□□ -1.77
CDR1-202ENST00000625883 CSTL1Q9H114 145 aa3.98□□□□□ -1.77
CDR1-202ENST00000625883 SEMA6AQ9H2E6 1030 aa3.98□□□□□ -1.77
CDR1-202ENST00000625883 SLA2Q9H6Q3 261 aa3.98□□□□□ -1.77
CDR1-202ENST00000625883 ERVMER34-1Q9H9K5 563 aa3.98□□□□□ -1.77
CDR1-202ENST00000625883 MBNL1Q9NR56 388 aaKnown RBP3.98□□□□□ -1.77
CDR1-202ENST00000625883 WNT16Q9UBV4 365 aa3.98□□□□□ -1.77
CDR1-202ENST00000625883 GAGE2DQ9UEU5 116 aa3.98□□□□□ -1.77
CDR1-202ENST00000625883 OSGIN1Q9UJX0 560 aa3.98□□□□□ -1.77
CDR1-202ENST00000625883 PCDHAC2Q9Y5I4 1007 aa3.98□□□□□ -1.77
CDR1-202ENST00000625883 EVPLQ92817 2033 aa3.97□□□□□ -1.77
CDR1-202ENST00000625883 A0A1W2PRQ8 180 aa3.97□□□□□ -1.77
CDR1-202ENST00000625883 FEZF1A0PJY2 475 aa3.97□□□□□ -1.77
CDR1-202ENST00000625883 LDB3O75112 727 aa3.97□□□□□ -1.77
CDR1-202ENST00000625883 CAMTA2O94983 1202 aa3.97□□□□□ -1.77
CDR1-202ENST00000625883 HSPA4LO95757 839 aa3.97□□□□□ -1.77
CDR1-202ENST00000625883 TRUB2O95900 331 aaKnown RBP3.97□□□□□ -1.77
CDR1-202ENST00000625883 NGFRP08138 427 aa3.97□□□□□ -1.77
CDR1-202ENST00000625883 GABRA5P31644 462 aa3.97□□□□□ -1.77
CDR1-202ENST00000625883 PEX5P50542 639 aa3.97□□□□□ -1.77
CDR1-202ENST00000625883 ZNF41P51814 821 aaPredicted RBP3.97□□□□□ -1.77
CDR1-202ENST00000625883 CSE1LP55060 971 aaKnown RBP3.97□□□□□ -1.77
CDR1-202ENST00000625883 RELQ04864 619 aaPredicted RBP3.97□□□□□ -1.77
CDR1-202ENST00000625883 KIF5AQ12840 1032 aa3.97□□□□□ -1.77
CDR1-202ENST00000625883 ZNF234Q14588 700 aa3.97□□□□□ -1.77
CDR1-202ENST00000625883 PSMD6Q15008 389 aa3.97□□□□□ -1.77
CDR1-202ENST00000625883 C6orf163Q5TEZ5 329 aa3.97□□□□□ -1.77
CDR1-202ENST00000625883 FIGLAQ6QHK4 219 aa3.97□□□□□ -1.77
CDR1-202ENST00000625883 SLFN11Q7Z7L1 901 aa3.97□□□□□ -1.77
CDR1-202ENST00000625883 NKAIN3Q8N8D7 197 aa3.97□□□□□ -1.77
CDR1-202ENST00000625883 LILRB1Q8NHL6 650 aaPredicted RBP3.97□□□□□ -1.77
CDR1-202ENST00000625883 SPACA9Q96E40 222 aaPredicted RBP3.97□□□□□ -1.77
CDR1-202ENST00000625883 ARSGQ96EG1 525 aa3.97□□□□□ -1.77
CDR1-202ENST00000625883 PRMT6Q96LA8 375 aaPredicted RBP3.97□□□□□ -1.77
CDR1-202ENST00000625883 ZNF582Q96NG8 517 aaPredicted RBP3.97□□□□□ -1.77
CDR1-202ENST00000625883 ZNF385AQ96PM9 386 aaKnown RBP3.97□□□□□ -1.77
CDR1-202ENST00000625883 OR6C1Q96RD1 312 aa3.97□□□□□ -1.77
CDR1-202ENST00000625883 SYT17Q9BSW7 474 aa3.97□□□□□ -1.77
CDR1-202ENST00000625883 ANKZF1Q9H8Y5 726 aa3.97□□□□□ -1.77
CDR1-202ENST00000625883 RHCGQ9UBD6 479 aa3.97□□□□□ -1.77
CDR1-202ENST00000625883 TAF1P21675 1872 aa3.96□□□□□ -1.78
CDR1-202ENST00000625883 A0A0G2JPF8 293 aa3.96□□□□□ -1.78
CDR1-202ENST00000625883 A0A1W2PPM1 405 aa3.96□□□□□ -1.78
CDR1-202ENST00000625883 C5orf60A6NFR6 353 aa3.96□□□□□ -1.78
CDR1-202ENST00000625883 C4orf47A7E2U8 309 aa3.96□□□□□ -1.78
CDR1-202ENST00000625883 HNRNPCL3B7ZW38 293 aa3.96□□□□□ -1.78
CDR1-202ENST00000625883 SMAD6O43541 496 aaKnown RBP3.96□□□□□ -1.78
CDR1-202ENST00000625883 SSX4O60224 188 aa3.96□□□□□ -1.78
CDR1-202ENST00000625883 GCNT3O95395 438 aa3.96□□□□□ -1.78
CDR1-202ENST00000625883 NTN1O95631 604 aa3.96□□□□□ -1.78
CDR1-202ENST00000625883 HNRNPCL4P0DMR1 293 aa3.96□□□□□ -1.78
CDR1-202ENST00000625883 POLR2CP19387 275 aaPredicted RBP3.96□□□□□ -1.78
CDR1-202ENST00000625883 CDKN2AP42771 156 aaKnown RBP3.96□□□□□ -1.78
CDR1-202ENST00000625883 MATR3P43243 847 aaKnown RBP eCLIP3.96□□□□□ -1.78
CDR1-202ENST00000625883 NANOS2P60321 138 aaKnown RBP3.96□□□□□ -1.78
CDR1-202ENST00000625883 HNRNPKP61978 463 aaKnown RBP eCLIP3.96□□□□□ -1.78
CDR1-202ENST00000625883 ROR1Q01973 937 aa3.96□□□□□ -1.78
CDR1-202ENST00000625883 RALGDSQ12967 914 aa3.96□□□□□ -1.78
CDR1-202ENST00000625883 CAMK2DQ13557 499 aa3.96□□□□□ -1.78
CDR1-202ENST00000625883 SF3B4Q15427 424 aaKnown RBP eCLIP3.96□□□□□ -1.78
CDR1-202ENST00000625883 TRNP1Q6NT89 227 aa3.96□□□□□ -1.78
CDR1-202ENST00000625883 ZNF704Q6ZNC4 412 aaPredicted RBP3.96□□□□□ -1.78
CDR1-202ENST00000625883 ASB18Q6ZVZ8 466 aa3.96□□□□□ -1.78
CDR1-202ENST00000625883 CREB3L2Q70SY1 520 aa3.96□□□□□ -1.78
CDR1-202ENST00000625883 ARHGAP30Q7Z6I6 1101 aaPredicted RBP3.96□□□□□ -1.78
CDR1-202ENST00000625883 ZNF441Q8N8Z8 693 aa3.96□□□□□ -1.78
CDR1-202ENST00000625883 OR2AJ1Q8NGZ0 328 aa3.96□□□□□ -1.78
CDR1-202ENST00000625883 BBS10Q8TAM1 723 aa3.96□□□□□ -1.78
CDR1-202ENST00000625883 FIG4Q92562 907 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms