RNA–Protein interactions for RNA: ENST00000625245.2

SMN1-211, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN1, Length 885 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-211ENST00000625245 PWWP2BQ6NUJ5 590 aa18.58■□□□□ 0.56
SMN1-211ENST00000625245 KLHL35Q6PF15 583 aa18.58■□□□□ 0.56
SMN1-211ENST00000625245 TMEM220Q6QAJ8 160 aa18.58■□□□□ 0.56
SMN1-211ENST00000625245 CLEC18BQ6UXF7 455 aa18.58■□□□□ 0.56
SMN1-211ENST00000625245 VSIG1Q86XK7 387 aa18.58■□□□□ 0.56
SMN1-211ENST00000625245 TTC30BQ8N4P2 665 aa18.58■□□□□ 0.56
SMN1-211ENST00000625245 CLEC18CQ8NCF0 446 aa18.58■□□□□ 0.56
SMN1-211ENST00000625245 GPR150Q8NGU9 434 aa18.58■□□□□ 0.56
SMN1-211ENST00000625245 UBXN4Q92575 508 aa18.58■□□□□ 0.56
SMN1-211ENST00000625245 TEKT5Q96M29 485 aa18.58■□□□□ 0.56
SMN1-211ENST00000625245 XPO4Q9C0E2 1151 aaKnown RBP18.58■□□□□ 0.56
SMN1-211ENST00000625245 ACTL8Q9H568 366 aa18.58■□□□□ 0.56
SMN1-211ENST00000625245 UGT1A7Q9HAW7 530 aa18.58■□□□□ 0.56
SMN1-211ENST00000625245 UGT1A10Q9HAW8 530 aa18.58■□□□□ 0.56
SMN1-211ENST00000625245 UGT1A8Q9HAW9 530 aa18.58■□□□□ 0.56
SMN1-211ENST00000625245 IL26Q9NPH9 171 aa18.58■□□□□ 0.56
SMN1-211ENST00000625245 PCDHGA6Q9Y5G7 932 aa18.58■□□□□ 0.56
SMN1-211ENST00000625245 C21orf140B9A014 251 aa18.57■□□□□ 0.56
SMN1-211ENST00000625245 F5H423 210 aaPredicted RBP18.57■□□□□ 0.56
SMN1-211ENST00000625245 DNAJB5O75953 348 aa18.57■□□□□ 0.56
SMN1-211ENST00000625245 EBLN1P0CF75 366 aa18.57■□□□□ 0.56
SMN1-211ENST00000625245 PBLDP30039 288 aaPredicted RBP18.57■□□□□ 0.56
SMN1-211ENST00000625245 HMGCLP35914 325 aa18.57■□□□□ 0.56
SMN1-211ENST00000625245 SPAM1P38567 509 aa18.57■□□□□ 0.56
SMN1-211ENST00000625245 ARHGAP25P42331 645 aa18.57■□□□□ 0.56
SMN1-211ENST00000625245 CTSCP53634 463 aa18.57■□□□□ 0.56
SMN1-211ENST00000625245 WNT3AP56704 352 aa18.57■□□□□ 0.56
SMN1-211ENST00000625245 LLGL1Q15334 1064 aa18.57■□□□□ 0.56
SMN1-211ENST00000625245 FAM199XQ6PEV8 388 aaPredicted RBP18.57■□□□□ 0.56
SMN1-211ENST00000625245 FAM151BQ6UXP7 276 aa18.57■□□□□ 0.56
SMN1-211ENST00000625245 CERS6Q6ZMG9 384 aa18.57■□□□□ 0.56
SMN1-211ENST00000625245 FAM83HQ6ZRV2 1179 aaPredicted RBP18.57■□□□□ 0.56
SMN1-211ENST00000625245 RASGEF1AQ8N9B8 481 aa18.57■□□□□ 0.56
SMN1-211ENST00000625245 RUFY1Q96T51 708 aa18.57■□□□□ 0.56
SMN1-211ENST00000625245 MAP3K3Q99759 626 aa18.57■□□□□ 0.56
SMN1-211ENST00000625245 ZCCHC2Q9C0B9 1178 aaKnown RBP18.57■□□□□ 0.56
SMN1-211ENST00000625245 TRABDQ9H4I3 376 aa18.57■□□□□ 0.56
SMN1-211ENST00000625245 AKIRIN1Q9H9L7 192 aaPredicted RBP18.57■□□□□ 0.56
SMN1-211ENST00000625245 SAE1Q9UBE0 346 aaPredicted RBP18.57■□□□□ 0.56
SMN1-211ENST00000625245 FAM153AQ9UHL3 310 aa18.57■□□□□ 0.56
SMN1-211ENST00000625245 HYOU1Q9Y4L1 999 aa18.57■□□□□ 0.56
SMN1-211ENST00000625245 CFAP20Q9Y6A4 193 aaKnown RBP18.57■□□□□ 0.56
SMN1-211ENST00000625245 OR2AG2A6NM03 316 aa18.56■□□□□ 0.56
SMN1-211ENST00000625245 GPR39O43194 453 aa18.56■□□□□ 0.56
SMN1-211ENST00000625245 BUD23O43709 281 aaKnown RBP18.56■□□□□ 0.56
SMN1-211ENST00000625245 RECKO95980 971 aa18.56■□□□□ 0.56
SMN1-211ENST00000625245 NFKB1P19838 968 aa18.56■□□□□ 0.56
SMN1-211ENST00000625245 CD68P34810 354 aaPredicted RBP18.56■□□□□ 0.56
SMN1-211ENST00000625245 RPS18P62269 152 aaKnown RBP18.56■□□□□ 0.56
SMN1-211ENST00000625245 ACY1Q03154 408 aa18.56■□□□□ 0.56
SMN1-211ENST00000625245 NFE2L1Q14494 772 aa18.56■□□□□ 0.56
SMN1-211ENST00000625245 ASTE1Q2TB18 679 aaPredicted RBP18.56■□□□□ 0.56
SMN1-211ENST00000625245 SIRPB2Q5JXA9 342 aa18.56■□□□□ 0.56
SMN1-211ENST00000625245 DNTTIP2Q5QJE6 756 aaKnown RBP18.56■□□□□ 0.56
SMN1-211ENST00000625245 LDLRAP1Q5SW96 308 aa18.56■□□□□ 0.56
SMN1-211ENST00000625245 MFSD7Q6UXD7 560 aa18.56■□□□□ 0.56
SMN1-211ENST00000625245 OR8K1Q8NGG5 319 aa18.56■□□□□ 0.56
SMN1-211ENST00000625245 BLOC1S5Q8TDH9 187 aa18.56■□□□□ 0.56
SMN1-211ENST00000625245 TFB1MQ8WVM0 346 aaKnown RBP18.56■□□□□ 0.56
SMN1-211ENST00000625245 SLC41A2Q96JW4 573 aa18.56■□□□□ 0.56
SMN1-211ENST00000625245 TRIM55Q9BYV6 548 aa18.56■□□□□ 0.56
SMN1-211ENST00000625245 IMP3Q9NV31 184 aaKnown RBP18.56■□□□□ 0.56
SMN1-211ENST00000625245 ZNHIT6Q9NWK9 470 aaKnown RBP18.56■□□□□ 0.56
SMN1-211ENST00000625245 RP1L1Q8IWN7 2480 aaPredicted RBP18.56■□□□□ 0.56
SMN1-211ENST00000625245 MED13Q9UHV7 2174 aa18.55■□□□□ 0.56
SMN1-211ENST00000625245 LOC285095A0A1B0GVY8 99 aa18.55■□□□□ 0.56
SMN1-211ENST00000625245 UBA6A0AVT1 1052 aaPredicted RBP18.55■□□□□ 0.56
SMN1-211ENST00000625245 BLACEA4D250 179 aa18.55■□□□□ 0.56
SMN1-211ENST00000625245 TTLL8A6PVC2 850 aa18.55■□□□□ 0.56
SMN1-211ENST00000625245 PDGFAP04085 211 aa18.55■□□□□ 0.56
SMN1-211ENST00000625245 CHRNA4P43681 627 aa18.55■□□□□ 0.56
SMN1-211ENST00000625245 CD97P48960 835 aa18.55■□□□□ 0.56
SMN1-211ENST00000625245 RPS15P62841 145 aaKnown RBP18.55■□□□□ 0.56
SMN1-211ENST00000625245 PDE1BQ01064 536 aa18.55■□□□□ 0.56
SMN1-211ENST00000625245 DMPKQ09013 629 aa18.55■□□□□ 0.56
SMN1-211ENST00000625245 XRCC4Q13426 336 aa18.55■□□□□ 0.56
SMN1-211ENST00000625245 SEMA5AQ13591 1074 aa18.55■□□□□ 0.56
SMN1-211ENST00000625245 PRKD1Q15139 912 aaPredicted RBP18.55■□□□□ 0.56
SMN1-211ENST00000625245 ZDHHC20Q5W0Z9 365 aa18.55■□□□□ 0.56
SMN1-211ENST00000625245 KAZNQ674X7 775 aa18.55■□□□□ 0.56
SMN1-211ENST00000625245 KDELC1Q6UW63 502 aa18.55■□□□□ 0.56
SMN1-211ENST00000625245 BZW1Q7L1Q6 419 aaKnown RBP18.55■□□□□ 0.56
SMN1-211ENST00000625245 APLFQ8IW19 511 aaPredicted RBP18.55■□□□□ 0.56
SMN1-211ENST00000625245 RHOT1Q8IXI2 618 aa18.55■□□□□ 0.56
SMN1-211ENST00000625245 ZNF514Q96K75 400 aaPredicted RBP18.55■□□□□ 0.56
SMN1-211ENST00000625245 FCRL4Q96PJ5 515 aa18.55■□□□□ 0.56
SMN1-211ENST00000625245 ANP32EQ9BTT0 268 aa18.55■□□□□ 0.56
SMN1-211ENST00000625245 GPR87Q9BY21 358 aa18.55■□□□□ 0.56
SMN1-211ENST00000625245 FGF21Q9NSA1 209 aa18.55■□□□□ 0.56
SMN1-211ENST00000625245 SPTLC3Q9NUV7 552 aa18.55■□□□□ 0.56
SMN1-211ENST00000625245 HRASLS2Q9NWW9 162 aa18.55■□□□□ 0.56
SMN1-211ENST00000625245 DDX56Q9NY93 547 aaKnown RBP18.55■□□□□ 0.56
SMN1-211ENST00000625245 IL17CQ9P0M4 197 aa18.55■□□□□ 0.56
SMN1-211ENST00000625245 SEMA5BQ9P283 1151 aa18.55■□□□□ 0.56
SMN1-211ENST00000625245 KLHL8Q9P2G9 620 aaPredicted RBP18.55■□□□□ 0.56
SMN1-211ENST00000625245 GLYATL1P3A0A0U1RQE8 302 aa18.54■□□□□ 0.56
SMN1-211ENST00000625245 TPM3P06753 285 aa18.54■□□□□ 0.56
SMN1-211ENST00000625245 SPTBP11277 2137 aa18.54■□□□□ 0.56
SMN1-211ENST00000625245 PTPN4P29074 926 aa18.54■□□□□ 0.56
SMN1-211ENST00000625245 CA5AP35218 305 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms