RNA–Protein interactions for RNA: ENST00000622836.1

PCDHGC3-208, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3

Gene PCDHGC3, Length 795 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-208ENST00000622836 GPLD1P80108 840 aa13.72□□□□□ -0.21
PCDHGC3-208ENST00000622836 NR1D2Q14995 579 aa13.72□□□□□ -0.21
PCDHGC3-208ENST00000622836 RTP5Q14D33 572 aa13.72□□□□□ -0.21
PCDHGC3-208ENST00000622836 DBN1Q16643 649 aa13.72□□□□□ -0.21
PCDHGC3-208ENST00000622836 BCL7AQ4VC05 210 aa13.72□□□□□ -0.21
PCDHGC3-208ENST00000622836 FASTKD1Q53R41 847 aaKnown RBP13.72□□□□□ -0.21
PCDHGC3-208ENST00000622836 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.72□□□□□ -0.21
PCDHGC3-208ENST00000622836 LRRC8BQ6P9F7 803 aa13.72□□□□□ -0.21
PCDHGC3-208ENST00000622836 ABRAXAS1Q6UWZ7 409 aa13.72□□□□□ -0.21
PCDHGC3-208ENST00000622836 MICALCLQ6ZW33 695 aa13.72□□□□□ -0.21
PCDHGC3-208ENST00000622836 PIANPQ8IYJ0 282 aa13.72□□□□□ -0.21
PCDHGC3-208ENST00000622836 C17orf53Q8N3J3 647 aaPredicted RBP13.72□□□□□ -0.21
PCDHGC3-208ENST00000622836 OTUD6BQ8N6M0 293 aa13.72□□□□□ -0.21
PCDHGC3-208ENST00000622836 OR2L2Q8NH16 312 aa13.72□□□□□ -0.21
PCDHGC3-208ENST00000622836 WDR36Q8NI36 951 aaKnown RBP13.72□□□□□ -0.21
PCDHGC3-208ENST00000622836 ZNF778Q96MU6 729 aa13.72□□□□□ -0.21
PCDHGC3-208ENST00000622836 DDX47Q9H0S4 455 aaKnown RBP13.72□□□□□ -0.21
PCDHGC3-208ENST00000622836 POLR1BQ9H9Y6 1135 aa13.72□□□□□ -0.21
PCDHGC3-208ENST00000622836 CHRAC1Q9NRG0 131 aa13.72□□□□□ -0.21
PCDHGC3-208ENST00000622836 AKAP7Q9P0M2 348 aaPredicted RBP13.72□□□□□ -0.21
PCDHGC3-208ENST00000622836 SAMD15Q9P1V8 674 aa13.72□□□□□ -0.21
PCDHGC3-208ENST00000622836 ASIC3Q9UHC3 531 aa13.72□□□□□ -0.21
PCDHGC3-208ENST00000622836 RIMKLBQ9ULI2 386 aa13.72□□□□□ -0.21
PCDHGC3-208ENST00000622836 PSMD13Q9UNM6 376 aa13.72□□□□□ -0.21
PCDHGC3-208ENST00000622836 CCDC187A0A096LP49 1063 aa13.71□□□□□ -0.21
PCDHGC3-208ENST00000622836 TCRBV7S3A2A0A539 114 aa13.71□□□□□ -0.21
PCDHGC3-208ENST00000622836 GOLGA8MH3BSY2 632 aa13.71□□□□□ -0.21
PCDHGC3-208ENST00000622836 SLC35G4P0C7Q5 338 aa13.71□□□□□ -0.21
PCDHGC3-208ENST00000622836 BRAFP15056 766 aa13.71□□□□□ -0.21
PCDHGC3-208ENST00000622836 XRCC1P18887 633 aaPredicted RBP13.71□□□□□ -0.21
PCDHGC3-208ENST00000622836 CD1CP29017 333 aa13.71□□□□□ -0.21
PCDHGC3-208ENST00000622836 FOXN2P32314 431 aa13.71□□□□□ -0.21
PCDHGC3-208ENST00000622836 PPARGP37231 505 aaPredicted RBP13.71□□□□□ -0.21
PCDHGC3-208ENST00000622836 NSG1P42857 185 aa13.71□□□□□ -0.21
PCDHGC3-208ENST00000622836 PRLHRP49683 370 aa13.71□□□□□ -0.21
PCDHGC3-208ENST00000622836 DMPKQ09013 629 aa13.71□□□□□ -0.21
PCDHGC3-208ENST00000622836 KCNJ11Q14654 390 aa13.71□□□□□ -0.21
PCDHGC3-208ENST00000622836 CLPPQ16740 277 aaPredicted RBP13.71□□□□□ -0.21
PCDHGC3-208ENST00000622836 AGAP9Q5VTM2 703 aa13.71□□□□□ -0.21
PCDHGC3-208ENST00000622836 LYPLAL1Q5VWZ2 237 aa13.71□□□□□ -0.21
PCDHGC3-208ENST00000622836 ZNF449Q6P9G9 518 aa13.71□□□□□ -0.21
PCDHGC3-208ENST00000622836 WASH2PQ6VEQ5 465 aa13.71□□□□□ -0.21
PCDHGC3-208ENST00000622836 FAM83HQ6ZRV2 1179 aaPredicted RBP13.71□□□□□ -0.21
PCDHGC3-208ENST00000622836 PROSER1Q86XN7 944 aa13.71□□□□□ -0.21
PCDHGC3-208ENST00000622836 KLHL7Q8IXQ5 586 aa13.71□□□□□ -0.21
PCDHGC3-208ENST00000622836 CFAP206Q8IYR0 622 aa13.71□□□□□ -0.21
PCDHGC3-208ENST00000622836 LSMEM2Q8N112 164 aa13.71□□□□□ -0.21
PCDHGC3-208ENST00000622836 OR4L1Q8NH43 312 aa13.71□□□□□ -0.21
PCDHGC3-208ENST00000622836 CPT1BQ92523 772 aa13.71□□□□□ -0.21
PCDHGC3-208ENST00000622836 PEX13Q92968 403 aa13.71□□□□□ -0.21
PCDHGC3-208ENST00000622836 CCDC97Q96F63 343 aaPredicted RBP13.71□□□□□ -0.21
PCDHGC3-208ENST00000622836 LIN37Q96GY3 246 aaPredicted RBP13.71□□□□□ -0.21
PCDHGC3-208ENST00000622836 NUDT22Q9BRQ3 303 aa13.71□□□□□ -0.21
PCDHGC3-208ENST00000622836 WASH6PQ9NQA3 447 aa13.71□□□□□ -0.21
PCDHGC3-208ENST00000622836 POT1Q9NUX5 634 aa13.71□□□□□ -0.21
PCDHGC3-208ENST00000622836 IMP3Q9NV31 184 aaKnown RBP13.71□□□□□ -0.21
PCDHGC3-208ENST00000622836 SYBUQ9NX95 663 aa13.71□□□□□ -0.21
PCDHGC3-208ENST00000622836 ZNF624Q9P2J8 865 aaPredicted RBP13.71□□□□□ -0.21
PCDHGC3-208ENST00000622836 DKK4Q9UBT3 224 aa13.71□□□□□ -0.21
PCDHGC3-208ENST00000622836 WDR37Q9Y2I8 494 aa13.71□□□□□ -0.21
PCDHGC3-208ENST00000622836 ACACAQ13085 2346 aa13.71□□□□□ -0.21
PCDHGC3-208ENST00000622836 PRR19A6NJB7 356 aa13.7□□□□□ -0.22
PCDHGC3-208ENST00000622836 AVILO75366 819 aa13.7□□□□□ -0.22
PCDHGC3-208ENST00000622836 POLBP06746 335 aa13.7□□□□□ -0.22
PCDHGC3-208ENST00000622836 JMJD7P0C870 316 aa13.7□□□□□ -0.22
PCDHGC3-208ENST00000622836 PSMA3P25788 255 aa13.7□□□□□ -0.22
PCDHGC3-208ENST00000622836 CASQ1P31415 396 aa13.7□□□□□ -0.22
PCDHGC3-208ENST00000622836 CCKBRP32239 447 aa13.7□□□□□ -0.22
PCDHGC3-208ENST00000622836 SLC19A1P41440 591 aa13.7□□□□□ -0.22
PCDHGC3-208ENST00000622836 LSSP48449 732 aa13.7□□□□□ -0.22
PCDHGC3-208ENST00000622836 EPHA4P54764 986 aa13.7□□□□□ -0.22
PCDHGC3-208ENST00000622836 UBE2IP63279 158 aaKnown RBP13.7□□□□□ -0.22
PCDHGC3-208ENST00000622836 EIF3IQ13347 325 aaKnown RBP13.7□□□□□ -0.22
PCDHGC3-208ENST00000622836 ITIH4Q14624 930 aa13.7□□□□□ -0.22
PCDHGC3-208ENST00000622836 CLCA4Q14CN2 919 aa13.7□□□□□ -0.22
PCDHGC3-208ENST00000622836 AARS2Q5JTZ9 985 aaKnown RBP13.7□□□□□ -0.22
PCDHGC3-208ENST00000622836 ANKRD22Q5VYY1 191 aa13.7□□□□□ -0.22
PCDHGC3-208ENST00000622836 METRNLQ641Q3 311 aa13.7□□□□□ -0.22
PCDHGC3-208ENST00000622836 CERS6Q6ZMG9 384 aa13.7□□□□□ -0.22
PCDHGC3-208ENST00000622836 TMEM26Q6ZUK4 368 aa13.7□□□□□ -0.22
PCDHGC3-208ENST00000622836 ZNF534Q76KX8 674 aa13.7□□□□□ -0.22
PCDHGC3-208ENST00000622836 RAB11FIP2Q7L804 512 aa13.7□□□□□ -0.22
PCDHGC3-208ENST00000622836 CREG2Q8IUH2 290 aa13.7□□□□□ -0.22
PCDHGC3-208ENST00000622836 FBXO39Q8N4B4 442 aa13.7□□□□□ -0.22
PCDHGC3-208ENST00000622836 CLDN19Q8N6F1 224 aa13.7□□□□□ -0.22
PCDHGC3-208ENST00000622836 HM13Q8TCT9 377 aa13.7□□□□□ -0.22
PCDHGC3-208ENST00000622836 NCSTNQ92542 709 aa13.7□□□□□ -0.22
PCDHGC3-208ENST00000622836 C12orf66Q96MD2 445 aa13.7□□□□□ -0.22
PCDHGC3-208ENST00000622836 RUNDC3BQ96NL0 473 aa13.7□□□□□ -0.22
PCDHGC3-208ENST00000622836 CMKLR1Q99788 373 aa13.7□□□□□ -0.22
PCDHGC3-208ENST00000622836 DPYSL5Q9BPU6 564 aa13.7□□□□□ -0.22
PCDHGC3-208ENST00000622836 CCM2Q9BSQ5 444 aa13.7□□□□□ -0.22
PCDHGC3-208ENST00000622836 TBC1D10AQ9BXI6 508 aa13.7□□□□□ -0.22
PCDHGC3-208ENST00000622836 WWP1Q9H0M0 922 aa13.7□□□□□ -0.22
PCDHGC3-208ENST00000622836 SEMA6CQ9H3T2 930 aa13.7□□□□□ -0.22
PCDHGC3-208ENST00000622836 XAB2Q9HCS7 855 aaKnown RBP13.7□□□□□ -0.22
PCDHGC3-208ENST00000622836 CATSPERZQ9NTU4 200 aa13.7□□□□□ -0.22
PCDHGC3-208ENST00000622836 ACSL5Q9ULC5 683 aa13.7□□□□□ -0.22
PCDHGC3-208ENST00000622836 APC2O95996 2303 aa13.7□□□□□ -0.22
PCDHGC3-208ENST00000622836 FREM2Q5SZK8 3169 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms