RNA–Protein interactions for RNA: ENST00000620864.1

COLCA1-205, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best) BASIC

Gene COLCA1, Length 8,098 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-205ENST00000620864 CRHR1P34998 444 aa7.11□□□□□ -1.27
COLCA1-205ENST00000620864 HNF1BP35680 557 aa7.11□□□□□ -1.27
COLCA1-205ENST00000620864 RAB27AP51159 221 aa7.11□□□□□ -1.27
COLCA1-205ENST00000620864 SLC7A2P52569 658 aa7.11□□□□□ -1.27
COLCA1-205ENST00000620864 GJA9P57773 515 aa7.11□□□□□ -1.27
COLCA1-205ENST00000620864 ZNF181Q2M3W8 571 aa7.11□□□□□ -1.27
COLCA1-205ENST00000620864 ASTE1Q2TB18 679 aaPredicted RBP7.11□□□□□ -1.27
COLCA1-205ENST00000620864 ALG10Q5BKT4 473 aa7.11□□□□□ -1.27
COLCA1-205ENST00000620864 DCST1Q5T197 706 aa7.11□□□□□ -1.27
COLCA1-205ENST00000620864 ARMC12Q5T9G4 340 aa7.11□□□□□ -1.27
COLCA1-205ENST00000620864 KCTD8Q6ZWB6 473 aa7.11□□□□□ -1.27
COLCA1-205ENST00000620864 ZNF280BQ86YH2 543 aa7.11□□□□□ -1.27
COLCA1-205ENST00000620864 TIFAQ96CG3 184 aa7.11□□□□□ -1.27
COLCA1-205ENST00000620864 MSANTD3Q96H12 275 aa7.11□□□□□ -1.27
COLCA1-205ENST00000620864 PBDC1Q9BVG4 233 aa7.11□□□□□ -1.27
COLCA1-205ENST00000620864 TCF7L1Q9HCS4 588 aa7.11□□□□□ -1.27
COLCA1-205ENST00000620864 PDP1Q9P0J1 537 aaPredicted RBP7.11□□□□□ -1.27
COLCA1-205ENST00000620864 NCANO14594 1321 aa7.1□□□□□ -1.27
COLCA1-205ENST00000620864 INO80Q9ULG1 1556 aaPredicted RBP7.1□□□□□ -1.27
COLCA1-205ENST00000620864 ELOVL7A1L3X0 281 aa7.1□□□□□ -1.27
COLCA1-205ENST00000620864 IFNW1P05000 195 aa7.1□□□□□ -1.27
COLCA1-205ENST00000620864 AMPD1P23109 780 aa7.1□□□□□ -1.27
COLCA1-205ENST00000620864 CXCL17Q6UXB2 119 aa7.1□□□□□ -1.27
COLCA1-205ENST00000620864 SAPCD2Q86UD0 394 aa7.1□□□□□ -1.27
COLCA1-205ENST00000620864 PNLDC1Q8NA58 520 aaKnown RBP7.1□□□□□ -1.27
COLCA1-205ENST00000620864 TBC1D15Q8TC07 691 aa7.1□□□□□ -1.27
COLCA1-205ENST00000620864 SLC38A4Q969I6 547 aa7.1□□□□□ -1.27
COLCA1-205ENST00000620864 PSKH2Q96QS6 385 aa7.1□□□□□ -1.27
COLCA1-205ENST00000620864 OR5B12Q96R08 314 aa7.1□□□□□ -1.27
COLCA1-205ENST00000620864 ZNF717Q9BY31 904 aaPredicted RBP7.1□□□□□ -1.27
COLCA1-205ENST00000620864 SYT4Q9H2B2 425 aa7.1□□□□□ -1.27
COLCA1-205ENST00000620864 PCDHB16Q9NRJ7 776 aa7.1□□□□□ -1.27
COLCA1-205ENST00000620864 C19orf12Q9NSK7 152 aa7.1□□□□□ -1.27
COLCA1-205ENST00000620864 SASH3O75995 380 aa7.1□□□□□ -1.27
COLCA1-205ENST00000620864 VNN2O95498 520 aa7.1□□□□□ -1.27
COLCA1-205ENST00000620864 NUDT7P0C024 238 aa7.1□□□□□ -1.27
COLCA1-205ENST00000620864 PRKD1Q15139 912 aaPredicted RBP7.1□□□□□ -1.27
COLCA1-205ENST00000620864 GPRC6AQ5T6X5 926 aa7.1□□□□□ -1.27
COLCA1-205ENST00000620864 CPTPQ5TA50 214 aa7.1□□□□□ -1.27
COLCA1-205ENST00000620864 TAPT1Q6NXT6 567 aa7.1□□□□□ -1.27
COLCA1-205ENST00000620864 FOXR2Q6PJQ5 311 aa7.1□□□□□ -1.27
COLCA1-205ENST00000620864 UBQLNLQ8IYU4 475 aa7.1□□□□□ -1.27
COLCA1-205ENST00000620864 SUSD6Q92537 303 aa7.1□□□□□ -1.27
COLCA1-205ENST00000620864 CIDECQ96AQ7 238 aaPredicted RBP7.1□□□□□ -1.27
COLCA1-205ENST00000620864 TCF25Q9BQ70 676 aa7.1□□□□□ -1.27
COLCA1-205ENST00000620864 PI4K2AQ9BTU6 479 aa7.1□□□□□ -1.27
COLCA1-205ENST00000620864 CALCAP01258 141 aa7.1□□□□□ -1.27
COLCA1-205ENST00000620864 IFNA17P01571 189 aa7.1□□□□□ -1.27
COLCA1-205ENST00000620864 NAT1P18440 290 aa7.1□□□□□ -1.27
COLCA1-205ENST00000620864 IGFALSP35858 605 aa7.1□□□□□ -1.27
COLCA1-205ENST00000620864 BUD31P41223 144 aaPredicted RBP7.1□□□□□ -1.27
COLCA1-205ENST00000620864 NAGLUP54802 743 aa7.1□□□□□ -1.27
COLCA1-205ENST00000620864 MPP1Q00013 466 aa7.1□□□□□ -1.27
COLCA1-205ENST00000620864 C19orf57Q0VDD7 668 aa7.1□□□□□ -1.27
COLCA1-205ENST00000620864 AIMP2Q13155 320 aaKnown RBP7.1□□□□□ -1.27
COLCA1-205ENST00000620864 CLNKQ7Z7G1 428 aa7.1□□□□□ -1.27
COLCA1-205ENST00000620864 RANBP3LQ86VV4 465 aaPredicted RBP7.1□□□□□ -1.27
COLCA1-205ENST00000620864 SYNPOQ8N3V7 929 aa7.1□□□□□ -1.27
COLCA1-205ENST00000620864 TOMM5Q8N4H5 51 aa7.1□□□□□ -1.27
COLCA1-205ENST00000620864 OR4A15Q8NGL6 344 aa7.1□□□□□ -1.27
COLCA1-205ENST00000620864 CAMK1GQ96NX5 476 aa7.1□□□□□ -1.27
COLCA1-205ENST00000620864 CISHQ9NSE2 258 aa7.1□□□□□ -1.27
COLCA1-205ENST00000620864 SLC39A1Q9NY26 324 aa7.1□□□□□ -1.27
COLCA1-205ENST00000620864 MICAL3Q7RTP6 2002 aa7.1□□□□□ -1.27
COLCA1-205ENST00000620864 TNFRSF11BO00300 401 aa7.1□□□□□ -1.27
COLCA1-205ENST00000620864 PENKP01210 267 aaPredicted RBP7.1□□□□□ -1.27
COLCA1-205ENST00000620864 RARAP10276 462 aa7.1□□□□□ -1.27
COLCA1-205ENST00000620864 ANXA3P12429 323 aa7.1□□□□□ -1.27
COLCA1-205ENST00000620864 TRIM28Q13263 835 aaKnown RBP7.1□□□□□ -1.27
COLCA1-205ENST00000620864 LAPTM5Q13571 262 aa7.1□□□□□ -1.27
COLCA1-205ENST00000620864 TRAM1Q15629 374 aa7.1□□□□□ -1.27
COLCA1-205ENST00000620864 LY6KQ17RY6 165 aa7.1□□□□□ -1.27
COLCA1-205ENST00000620864 COL28A1Q2UY09 1125 aa7.1□□□□□ -1.27
COLCA1-205ENST00000620864 EIPR1Q53HC9 387 aa7.1□□□□□ -1.27
COLCA1-205ENST00000620864 C16orf46Q6P387 395 aa7.1□□□□□ -1.27
COLCA1-205ENST00000620864 USP30Q70CQ3 517 aa7.1□□□□□ -1.27
COLCA1-205ENST00000620864 ZNF767PQ75MW2 155 aa7.1□□□□□ -1.27
COLCA1-205ENST00000620864 APTXQ7Z2E3 356 aaKnown RBP7.1□□□□□ -1.27
COLCA1-205ENST00000620864 TDRPQ86YL5 185 aa7.1□□□□□ -1.27
COLCA1-205ENST00000620864 PTGR2Q8N8N7 351 aaPredicted RBP7.1□□□□□ -1.27
COLCA1-205ENST00000620864 ASCC1Q8N9N2 400 aaKnown RBP7.1□□□□□ -1.27
COLCA1-205ENST00000620864 PLA2G12BQ9BX93 195 aa7.1□□□□□ -1.27
COLCA1-205ENST00000620864 FARSBQ9NSD9 589 aaKnown RBP7.1□□□□□ -1.27
COLCA1-205ENST00000620864 ARHGAP20Q9P2F6 1191 aa7.1□□□□□ -1.27
COLCA1-205ENST00000620864 KANSL3Q9P2N6 904 aa7.1□□□□□ -1.27
COLCA1-205ENST00000620864 OR10H1Q9Y4A9 318 aa7.1□□□□□ -1.27
COLCA1-205ENST00000620864 KCNE2Q9Y6J6 123 aa7.1□□□□□ -1.27
COLCA1-205ENST00000620864 ACOX3O15254 700 aa7.1□□□□□ -1.27
COLCA1-205ENST00000620864 SLC28A2O43868 658 aa7.1□□□□□ -1.27
COLCA1-205ENST00000620864 LIMK2P53671 638 aa7.1□□□□□ -1.27
COLCA1-205ENST00000620864 RGS8P57771 180 aaPredicted RBP7.1□□□□□ -1.27
COLCA1-205ENST00000620864 BCL2L1Q07817 233 aa7.1□□□□□ -1.27
COLCA1-205ENST00000620864 TBX2Q13207 712 aaPredicted RBP7.1□□□□□ -1.27
COLCA1-205ENST00000620864 RERGQ96A58 199 aaPredicted RBP7.1□□□□□ -1.27
COLCA1-205ENST00000620864 PPCDCQ96CD2 204 aa7.1□□□□□ -1.27
COLCA1-205ENST00000620864 ZNF570Q96NI8 536 aa7.1□□□□□ -1.27
COLCA1-205ENST00000620864 LGMNQ99538 433 aa7.1□□□□□ -1.27
COLCA1-205ENST00000620864 SAV1Q9H4B6 383 aaPredicted RBP7.1□□□□□ -1.27
COLCA1-205ENST00000620864 PCDHGA11Q9Y5H2 935 aa7.1□□□□□ -1.27
COLCA1-205ENST00000620864 ARL5CA6NH57 179 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms