RNA–Protein interactions for RNA: ENST00000620429.4

VPS11-207, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5 BASIC

Gene VPS11, Length 2,739 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-207ENST00000620429 RXFP2Q8WXD0 754 aa10.27□□□□□ -0.77
VPS11-207ENST00000620429 CNPY3Q9BT09 278 aa10.27□□□□□ -0.77
VPS11-207ENST00000620429 SPATC1LQ9H0A9 340 aa10.27□□□□□ -0.77
VPS11-207ENST00000620429 TXNRD2Q9NNW7 524 aa10.27□□□□□ -0.77
VPS11-207ENST00000620429 RNF186Q9NXI6 227 aa10.27□□□□□ -0.77
VPS11-207ENST00000620429 EHD3Q9NZN3 535 aa10.27□□□□□ -0.77
VPS11-207ENST00000620429 CCDC59Q9P031 241 aaKnown RBP10.27□□□□□ -0.77
VPS11-207ENST00000620429 ADGRE2Q9UHX3 823 aa10.27□□□□□ -0.77
VPS11-207ENST00000620429 WDR27A2RRH5 827 aa10.26□□□□□ -0.77
VPS11-207ENST00000620429 M0QYV0 167 aa10.26□□□□□ -0.77
VPS11-207ENST00000620429 DFNA5O60443 496 aa10.26□□□□□ -0.77
VPS11-207ENST00000620429 TRIM13O60858 407 aa10.26□□□□□ -0.77
VPS11-207ENST00000620429 SRP72O76094 671 aaKnown RBP10.26□□□□□ -0.77
VPS11-207ENST00000620429 MED26O95402 600 aa10.26□□□□□ -0.77
VPS11-207ENST00000620429 ZNF250P15622 560 aa10.26□□□□□ -0.77
VPS11-207ENST00000620429 POU3F3P20264 500 aaPredicted RBP10.26□□□□□ -0.77
VPS11-207ENST00000620429 MAGEA3P43357 314 aa10.26□□□□□ -0.77
VPS11-207ENST00000620429 TM4SF4P48230 202 aa10.26□□□□□ -0.77
VPS11-207ENST00000620429 EMX1Q04741 257 aaPredicted RBP10.26□□□□□ -0.77
VPS11-207ENST00000620429 FADDQ13158 208 aa10.26□□□□□ -0.77
VPS11-207ENST00000620429 LRRC26Q2I0M4 334 aa10.26□□□□□ -0.77
VPS11-207ENST00000620429 BCL7AQ4VC05 210 aa10.26□□□□□ -0.77
VPS11-207ENST00000620429 PPM1JQ5JR12 505 aa10.26□□□□□ -0.77
VPS11-207ENST00000620429 TPRG1LQ5T0D9 272 aa10.26□□□□□ -0.77
VPS11-207ENST00000620429 SYTL1Q8IYJ3 562 aa10.26□□□□□ -0.77
VPS11-207ENST00000620429 PQLC3Q8N755 202 aa10.26□□□□□ -0.77
VPS11-207ENST00000620429 SLAIN1Q8ND83 568 aa10.26□□□□□ -0.77
VPS11-207ENST00000620429 PAPD5Q8NDF8 572 aaKnown RBP10.26□□□□□ -0.77
VPS11-207ENST00000620429 AGR3Q8TD06 166 aa10.26□□□□□ -0.77
VPS11-207ENST00000620429 RORBQ92753 470 aa10.26□□□□□ -0.77
VPS11-207ENST00000620429 NRCAMQ92823 1304 aa10.26□□□□□ -0.77
VPS11-207ENST00000620429 B3GALT6Q96L58 329 aa10.26□□□□□ -0.77
VPS11-207ENST00000620429 NUAK2Q9H093 628 aa10.26□□□□□ -0.77
VPS11-207ENST00000620429 NUDT5Q9UKK9 219 aa10.26□□□□□ -0.77
VPS11-207ENST00000620429 PPP2R3BQ9Y5P8 575 aa10.26□□□□□ -0.77
VPS11-207ENST00000620429 CSADQ9Y600 493 aa10.26□□□□□ -0.77
VPS11-207ENST00000620429 A0A1W2PRG6 482 aa10.26□□□□□ -0.77
VPS11-207ENST00000620429 BCLAF3A2AJT9 711 aaKnown RBP10.26□□□□□ -0.77
VPS11-207ENST00000620429 PRSS44E7EML9 344 aa10.26□□□□□ -0.77
VPS11-207ENST00000620429 TPST1O60507 370 aa10.26□□□□□ -0.77
VPS11-207ENST00000620429 UGT2B17O75795 530 aa10.26□□□□□ -0.77
VPS11-207ENST00000620429 CNMDO75829 334 aa10.26□□□□□ -0.77
VPS11-207ENST00000620429 MPSTP25325 297 aa10.26□□□□□ -0.77
VPS11-207ENST00000620429 ICAM3P32942 547 aa10.26□□□□□ -0.77
VPS11-207ENST00000620429 ARL2P36404 184 aa10.26□□□□□ -0.77
VPS11-207ENST00000620429 ZNF157P51786 506 aaPredicted RBP10.26□□□□□ -0.77
VPS11-207ENST00000620429 UGT2B15P54855 530 aa10.26□□□□□ -0.77
VPS11-207ENST00000620429 RUNX1T1Q06455 604 aa10.26□□□□□ -0.77
VPS11-207ENST00000620429 SREBF2Q12772 1141 aa10.26□□□□□ -0.77
VPS11-207ENST00000620429 TRAF3Q13114 568 aa10.26□□□□□ -0.77
VPS11-207ENST00000620429 ZNF267Q14586 743 aaPredicted RBP10.26□□□□□ -0.77
VPS11-207ENST00000620429 CA9Q16790 459 aa10.26□□□□□ -0.77
VPS11-207ENST00000620429 SYT6Q5T7P8 510 aaPredicted RBP10.26□□□□□ -0.77
VPS11-207ENST00000620429 OR6B2Q6IFH4 312 aa10.26□□□□□ -0.77
VPS11-207ENST00000620429 BEND5Q7L4P6 421 aa10.26□□□□□ -0.77
VPS11-207ENST00000620429 DNERQ8NFT8 737 aa10.26□□□□□ -0.77
VPS11-207ENST00000620429 PCDH19Q8TAB3 1148 aa10.26□□□□□ -0.77
VPS11-207ENST00000620429 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.26□□□□□ -0.77
VPS11-207ENST00000620429 TMCO6Q96DC7 493 aa10.26□□□□□ -0.77
VPS11-207ENST00000620429 PDXPQ96GD0 296 aa10.26□□□□□ -0.77
VPS11-207ENST00000620429 MAGEB10Q96LZ2 347 aaPredicted RBP10.26□□□□□ -0.77
VPS11-207ENST00000620429 CCDC32Q9BV29 185 aa10.26□□□□□ -0.77
VPS11-207ENST00000620429 XYLT2Q9H1B5 865 aa10.26□□□□□ -0.77
VPS11-207ENST00000620429 ZNF358Q9NW07 568 aa10.26□□□□□ -0.77
VPS11-207ENST00000620429 PCDHGB2Q9Y5G2 931 aa10.26□□□□□ -0.77
VPS11-207ENST00000620429 G3V2L1 256 aa10.25□□□□□ -0.77
VPS11-207ENST00000620429 PEX14O75381 377 aa10.25□□□□□ -0.77
VPS11-207ENST00000620429 MICAL2O94851 1124 aa10.25□□□□□ -0.77
VPS11-207ENST00000620429 NPR3P17342 541 aa10.25□□□□□ -0.77
VPS11-207ENST00000620429 TFEBP19484 476 aa10.25□□□□□ -0.77
VPS11-207ENST00000620429 TYK2P29597 1187 aa10.25□□□□□ -0.77
VPS11-207ENST00000620429 NR2C2P49116 596 aa10.25□□□□□ -0.77
VPS11-207ENST00000620429 AP1S2P56377 157 aa10.25□□□□□ -0.77
VPS11-207ENST00000620429 OSTNP61366 133 aa10.25□□□□□ -0.77
VPS11-207ENST00000620429 SLAMF1Q13291 335 aa10.25□□□□□ -0.77
VPS11-207ENST00000620429 TTC23Q5W5X9 447 aa10.25□□□□□ -0.77
VPS11-207ENST00000620429 TRNP1Q6NT89 227 aa10.25□□□□□ -0.77
VPS11-207ENST00000620429 NRARPQ7Z6K4 114 aa10.25□□□□□ -0.77
VPS11-207ENST00000620429 RASAL3Q86YV0 1011 aa10.25□□□□□ -0.77
VPS11-207ENST00000620429 CDH26Q8IXH8 852 aa10.25□□□□□ -0.77
VPS11-207ENST00000620429 PELI3Q8N2H9 469 aa10.25□□□□□ -0.77
VPS11-207ENST00000620429 UBA3Q8TBC4 463 aa10.25□□□□□ -0.77
VPS11-207ENST00000620429 RPL3LQ92901 407 aaKnown RBP10.25□□□□□ -0.77
VPS11-207ENST00000620429 FAM149B1Q96BN6 582 aa10.25□□□□□ -0.77
VPS11-207ENST00000620429 ZHX1-C8orf76Q96EF9 292 aa10.25□□□□□ -0.77
VPS11-207ENST00000620429 MSANTD3Q96H12 275 aa10.25□□□□□ -0.77
VPS11-207ENST00000620429 RDH12Q96NR8 316 aa10.25□□□□□ -0.77
VPS11-207ENST00000620429 GAD1Q99259 594 aa10.25□□□□□ -0.77
VPS11-207ENST00000620429 EPS8L2Q9H6S3 715 aa10.25□□□□□ -0.77
VPS11-207ENST00000620429 PIH1D1Q9NWS0 290 aaKnown RBP10.25□□□□□ -0.77
VPS11-207ENST00000620429 SRRDQ9UH36 339 aa10.25□□□□□ -0.77
VPS11-207ENST00000620429 PCDHB3Q9Y5E6 796 aa10.25□□□□□ -0.77
VPS11-207ENST00000620429 PSAT1Q9Y617 370 aa10.25□□□□□ -0.77
VPS11-207ENST00000620429 HSPE1-MOB4S4R3N1 261 aa10.25□□□□□ -0.77
VPS11-207ENST00000620429 PNMA8CA0A1B0GUJ8 204 aa10.25□□□□□ -0.77
VPS11-207ENST00000620429 CLDN24A6NM45 220 aa10.25□□□□□ -0.77
VPS11-207ENST00000620429 LOC110117498-PIK3R3F6TDL0 507 aa10.25□□□□□ -0.77
VPS11-207ENST00000620429 F8W810 466 aa10.25□□□□□ -0.77
VPS11-207ENST00000620429 SOAT2O75908 522 aa10.25□□□□□ -0.77
VPS11-207ENST00000620429 OR2B3O76000 313 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms