RNA–Protein interactions for RNA: ENST00000618621.4

LPP-221, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

TSL 1 (best) BASIC

Gene LPP, Length 18,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-221ENST00000618621 FOXC2Q99958 501 aa3.03□□□□□ -1.92
LPP-221ENST00000618621 TRMT13Q9NUP7 481 aaKnown RBP3.03□□□□□ -1.92
LPP-221ENST00000618621 ACTR3BQ9P1U1 418 aa3.03□□□□□ -1.92
LPP-221ENST00000618621 NCDNQ9UBB6 729 aa3.03□□□□□ -1.92
LPP-221ENST00000618621 NFKBIEO00221 500 aa3.03□□□□□ -1.92
LPP-221ENST00000618621 TBL1XO60907 577 aa3.03□□□□□ -1.92
LPP-221ENST00000618621 HMGN1P05114 100 aa3.03□□□□□ -1.92
LPP-221ENST00000618621 CHRNGP07510 517 aa3.03□□□□□ -1.92
LPP-221ENST00000618621 RHOQP17081 205 aa3.03□□□□□ -1.92
LPP-221ENST00000618621 CREMQ03060 361 aa3.03□□□□□ -1.92
LPP-221ENST00000618621 DPYSL2Q16555 572 aa3.03□□□□□ -1.92
LPP-221ENST00000618621 OR2T12Q8NG77 320 aa3.03□□□□□ -1.92
LPP-221ENST00000618621 NDRG1Q92597 394 aaKnown RBP3.03□□□□□ -1.92
LPP-221ENST00000618621 MYO19Q96H55 970 aa3.03□□□□□ -1.92
LPP-221ENST00000618621 DNAJC1Q96KC8 554 aaKnown RBP3.03□□□□□ -1.92
LPP-221ENST00000618621 ZNHIT2Q9UHR6 403 aa3.03□□□□□ -1.92
LPP-221ENST00000618621 MRPS7Q9Y2R9 242 aaKnown RBP3.03□□□□□ -1.92
LPP-221ENST00000618621 ARHGEF33A8MVX0 844 aa3.03□□□□□ -1.92
LPP-221ENST00000618621 SLC9A3R1O14745 358 aaPredicted RBP3.03□□□□□ -1.92
LPP-221ENST00000618621 SCAMP3O14828 347 aaKnown RBP3.03□□□□□ -1.92
LPP-221ENST00000618621 NDUFS2O75306 463 aa3.03□□□□□ -1.92
LPP-221ENST00000618621 RECQL4O94761 1208 aa3.03□□□□□ -1.92
LPP-221ENST00000618621 GLUD2P49448 558 aa3.03□□□□□ -1.92
LPP-221ENST00000618621 MANFP55145 182 aaKnown RBP3.03□□□□□ -1.92
LPP-221ENST00000618621 BEX3Q00994 111 aa3.03□□□□□ -1.92
LPP-221ENST00000618621 CCNIQ14094 377 aa3.03□□□□□ -1.92
LPP-221ENST00000618621 KCNJ11Q14654 390 aa3.03□□□□□ -1.92
LPP-221ENST00000618621 TSTD2Q5T7W7 516 aa3.03□□□□□ -1.92
LPP-221ENST00000618621 TRPV1Q8NER1 839 aa3.03□□□□□ -1.92
LPP-221ENST00000618621 LRRN4Q8WUT4 740 aa3.03□□□□□ -1.92
LPP-221ENST00000618621 CAMK1GQ96NX5 476 aa3.03□□□□□ -1.92
LPP-221ENST00000618621 PKP2Q99959 881 aa3.03□□□□□ -1.92
LPP-221ENST00000618621 GPATCH1Q9BRR8 931 aaKnown RBP3.03□□□□□ -1.92
LPP-221ENST00000618621 C1orf109Q9NX04 203 aa3.03□□□□□ -1.92
LPP-221ENST00000618621 IFT80Q9P2H3 777 aaPredicted RBP3.03□□□□□ -1.92
LPP-221ENST00000618621 SPEF1Q9Y4P9 236 aa3.03□□□□□ -1.92
LPP-221ENST00000618621 A0A1B0GVG6 124 aa3.03□□□□□ -1.92
LPP-221ENST00000618621 FGF1P05230 155 aa3.03□□□□□ -1.92
LPP-221ENST00000618621 MPP1Q00013 466 aa3.03□□□□□ -1.92
LPP-221ENST00000618621 FCHO2Q0JRZ9 810 aa3.03□□□□□ -1.92
LPP-221ENST00000618621 PEX6Q13608 980 aa3.03□□□□□ -1.92
LPP-221ENST00000618621 ZNF773Q6PK81 442 aa3.03□□□□□ -1.92
LPP-221ENST00000618621 UNC5DQ6UXZ4 953 aa3.03□□□□□ -1.92
LPP-221ENST00000618621 DENND1CQ8IV53 801 aa3.03□□□□□ -1.92
LPP-221ENST00000618621 OR5K1Q8NHB7 308 aa3.03□□□□□ -1.92
LPP-221ENST00000618621 PCBD2Q9H0N5 130 aa3.03□□□□□ -1.92
LPP-221ENST00000618621 NANSQ9NR45 359 aa3.03□□□□□ -1.92
LPP-221ENST00000618621 TRNAU1APQ9NX07 287 aaKnown RBP3.03□□□□□ -1.92
LPP-221ENST00000618621 PTBP2Q9UKA9 531 aaKnown RBP3.03□□□□□ -1.92
LPP-221ENST00000618621 PCDHGB7Q9Y5F8 929 aa3.03□□□□□ -1.92
LPP-221ENST00000618621 TEX264Q9Y6I9 313 aa3.03□□□□□ -1.92
LPP-221ENST00000618621 J3QRK9 145 aa3.03□□□□□ -1.93
LPP-221ENST00000618621 PAGE1O75459 146 aa3.03□□□□□ -1.93
LPP-221ENST00000618621 EPOP01588 193 aa3.03□□□□□ -1.93
LPP-221ENST00000618621 PEPDP12955 493 aa3.03□□□□□ -1.93
LPP-221ENST00000618621 HDCP19113 662 aa3.03□□□□□ -1.93
LPP-221ENST00000618621 IL1R2P27930 398 aa3.03□□□□□ -1.93
LPP-221ENST00000618621 HCAR3P49019 387 aa3.03□□□□□ -1.93
LPP-221ENST00000618621 UGT2B15P54855 530 aa3.03□□□□□ -1.93
LPP-221ENST00000618621 SSTP61278 116 aa3.03□□□□□ -1.93
LPP-221ENST00000618621 GAD2Q05329 585 aa3.03□□□□□ -1.93
LPP-221ENST00000618621 ITGA7Q13683 1181 aa3.03□□□□□ -1.93
LPP-221ENST00000618621 SCIMPQ6UWF3 145 aa3.03□□□□□ -1.93
LPP-221ENST00000618621 PEG10Q86TG7 708 aaKnown RBP3.03□□□□□ -1.93
LPP-221ENST00000618621 ZNF567Q8N184 647 aa3.03□□□□□ -1.93
LPP-221ENST00000618621 GATA6Q92908 595 aa3.03□□□□□ -1.93
LPP-221ENST00000618621 FBXL8Q96CD0 374 aa3.03□□□□□ -1.93
LPP-221ENST00000618621 AP1S3Q96PC3 154 aa3.03□□□□□ -1.93
LPP-221ENST00000618621 CDKN2AIPQ9NXV6 580 aaPredicted RBP3.03□□□□□ -1.93
LPP-221ENST00000618621 EGFL7Q9UHF1 273 aa3.03□□□□□ -1.93
LPP-221ENST00000618621 H3BN98 237 aa3.03□□□□□ -1.93
LPP-221ENST00000618621 URODP06132 367 aa3.03□□□□□ -1.93
LPP-221ENST00000618621 PGRP06401 933 aa3.03□□□□□ -1.93
LPP-221ENST00000618621 CDH1P12830 882 aa3.03□□□□□ -1.93
LPP-221ENST00000618621 UBA1P22314 1058 aaKnown RBP3.03□□□□□ -1.93
LPP-221ENST00000618621 ADCYAP1R1P41586 468 aa3.03□□□□□ -1.93
LPP-221ENST00000618621 SLC5A3P53794 718 aa3.03□□□□□ -1.93
LPP-221ENST00000618621 PSMD4P55036 377 aaKnown RBP3.03□□□□□ -1.93
LPP-221ENST00000618621 CAV3P56539 151 aa3.03□□□□□ -1.93
LPP-221ENST00000618621 HERVK_113P63132 956 aa3.03□□□□□ -1.93
LPP-221ENST00000618621 PRKD1Q15139 912 aaPredicted RBP3.03□□□□□ -1.93
LPP-221ENST00000618621 TAF13Q15543 124 aa3.03□□□□□ -1.93
LPP-221ENST00000618621 PAN2Q504Q3 1202 aaKnown RBP3.03□□□□□ -1.93
LPP-221ENST00000618621 SETMARQ53H47 684 aaPredicted RBP3.03□□□□□ -1.93
LPP-221ENST00000618621 CAMKK1Q8N5S9 505 aa3.03□□□□□ -1.93
LPP-221ENST00000618621 HAVCR1Q96D42 359 aa3.03□□□□□ -1.93
LPP-221ENST00000618621 ACBD6Q9BR61 282 aa3.03□□□□□ -1.93
LPP-221ENST00000618621 ERVK-6Q9BXR3 956 aa3.03□□□□□ -1.93
LPP-221ENST00000618621 FAM50BQ9Y247 325 aa3.03□□□□□ -1.93
LPP-221ENST00000618621 SLC27A5Q9Y2P5 690 aa3.03□□□□□ -1.93
LPP-221ENST00000618621 PSMD11O00231 422 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 PGRMC2O15173 223 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 INSIG1O15503 277 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 GOT2P00505 430 aaKnown RBP3.02□□□□□ -1.93
LPP-221ENST00000618621 PIGRP01833 764 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 PRPS2P11908 318 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 IGFBP5P24593 272 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 PTPN3P26045 913 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 HSF2Q03933 536 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 ZMYND11Q15326 602 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms