RNA–Protein interactions for RNA: ENST00000618606.1

TARDBP-220, Transcript of TAR DNA binding protein, humanhuman

TSL 2

Gene TARDBP, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-220ENST00000618606 ANKRD18AQ8IVF6 992 aa2.53□□□□□ -2
TARDBP-220ENST00000618606 PSPC1Q8WXF1 523 aaKnown RBP2.53□□□□□ -2
TARDBP-220ENST00000618606 PRAC1Q96KF2 57 aa2.53□□□□□ -2
TARDBP-220ENST00000618606 TBATAQ96M53 351 aa2.53□□□□□ -2
TARDBP-220ENST00000618606 TMEM68Q96MH6 324 aa2.53□□□□□ -2
TARDBP-220ENST00000618606 AGAP3Q96P47 875 aa2.53□□□□□ -2
TARDBP-220ENST00000618606 ZNF300Q96RE9 604 aaPredicted RBP2.53□□□□□ -2
TARDBP-220ENST00000618606 RHNO1Q9BSD3 238 aa2.53□□□□□ -2
TARDBP-220ENST00000618606 SMC4Q9NTJ3 1288 aa2.53□□□□□ -2
TARDBP-220ENST00000618606 ABI3Q9P2A4 366 aa2.53□□□□□ -2
TARDBP-220ENST00000618606 PDP2Q9P2J9 529 aa2.53□□□□□ -2
TARDBP-220ENST00000618606 GJD2Q9UKL4 321 aa2.53□□□□□ -2
TARDBP-220ENST00000618606 INTS6Q9UL03 887 aaKnown RBP2.53□□□□□ -2
TARDBP-220ENST00000618606 LAS1LQ9Y4W2 734 aaKnown RBP2.53□□□□□ -2
TARDBP-220ENST00000618606 IGLV7-46A0A075B6I9 117 aa2.52□□□□□ -2.01
TARDBP-220ENST00000618606 GIMAP1-GIMAP5A0A087WTJ2 511 aa2.52□□□□□ -2.01
TARDBP-220ENST00000618606 A0A087WW49 117 aa2.52□□□□□ -2.01
TARDBP-220ENST00000618606 TEX13DA0A0J9YY54 714 aaPredicted RBP2.52□□□□□ -2.01
TARDBP-220ENST00000618606 C15orf62A8K5M9 175 aa2.52□□□□□ -2.01
TARDBP-220ENST00000618606 PLK4O00444 970 aa2.52□□□□□ -2.01
TARDBP-220ENST00000618606 JRKO75564 520 aa2.52□□□□□ -2.01
TARDBP-220ENST00000618606 MBD4O95243 580 aa2.52□□□□□ -2.01
TARDBP-220ENST00000618606 MOCS3O95396 460 aa2.52□□□□□ -2.01
TARDBP-220ENST00000618606 NGFP01138 241 aa2.52□□□□□ -2.01
TARDBP-220ENST00000618606 CD4P01730 458 aa2.52□□□□□ -2.01
TARDBP-220ENST00000618606 EDN1P05305 212 aa2.52□□□□□ -2.01
TARDBP-220ENST00000618606 ATP1A3P13637 1013 aa2.52□□□□□ -2.01
TARDBP-220ENST00000618606 PRG2P13727 222 aa2.52□□□□□ -2.01
TARDBP-220ENST00000618606 ANXA7P20073 488 aaKnown RBP2.52□□□□□ -2.01
TARDBP-220ENST00000618606 ABCD1P33897 745 aa2.52□□□□□ -2.01
TARDBP-220ENST00000618606 GGT5P36269 586 aa2.52□□□□□ -2.01
TARDBP-220ENST00000618606 CTSCP53634 463 aa2.52□□□□□ -2.01
TARDBP-220ENST00000618606 SNX16P57768 344 aa2.52□□□□□ -2.01
TARDBP-220ENST00000618606 MPP1Q00013 466 aa2.52□□□□□ -2.01
TARDBP-220ENST00000618606 DDX10Q13206 875 aaKnown RBP2.52□□□□□ -2.01
TARDBP-220ENST00000618606 TAF12Q16514 161 aa2.52□□□□□ -2.01
TARDBP-220ENST00000618606 CDONQ4KMG0 1287 aa2.52□□□□□ -2.01
TARDBP-220ENST00000618606 ALS2CLQ60I27 953 aa2.52□□□□□ -2.01
TARDBP-220ENST00000618606 DOK6Q6PKX4 331 aa2.52□□□□□ -2.01
TARDBP-220ENST00000618606 C1orf122Q6ZSJ8 110 aa2.52□□□□□ -2.01
TARDBP-220ENST00000618606 RSRC2Q7L4I2 434 aaKnown RBP2.52□□□□□ -2.01
TARDBP-220ENST00000618606 CDC20BQ86Y33 519 aa2.52□□□□□ -2.01
TARDBP-220ENST00000618606 PM20D2Q8IYS1 436 aa2.52□□□□□ -2.01
TARDBP-220ENST00000618606 ESX1Q8N693 406 aa2.52□□□□□ -2.01
TARDBP-220ENST00000618606 GCSAMQ8N6F7 178 aa2.52□□□□□ -2.01
TARDBP-220ENST00000618606 NAXEQ8NCW5 288 aa2.52□□□□□ -2.01
TARDBP-220ENST00000618606 OR2T12Q8NG77 320 aa2.52□□□□□ -2.01
TARDBP-220ENST00000618606 OR1J2Q8NGS2 313 aa2.52□□□□□ -2.01
TARDBP-220ENST00000618606 GTF3C6Q969F1 213 aa2.52□□□□□ -2.01
TARDBP-220ENST00000618606 GIMAP5Q96F15 307 aa2.52□□□□□ -2.01
TARDBP-220ENST00000618606 MAELQ96JY0 434 aaKnown RBP2.52□□□□□ -2.01
TARDBP-220ENST00000618606 PPM1MQ96MI6 270 aa2.52□□□□□ -2.01
TARDBP-220ENST00000618606 RANBP17Q9H2T7 1088 aaKnown RBP2.52□□□□□ -2.01
TARDBP-220ENST00000618606 SLC28A3Q9HAS3 691 aa2.52□□□□□ -2.01
TARDBP-220ENST00000618606 ECHDC1Q9NTX5 307 aa2.52□□□□□ -2.01
TARDBP-220ENST00000618606 STK39Q9UEW8 545 aa2.52□□□□□ -2.01
TARDBP-220ENST00000618606 NRBP1Q9UHY1 535 aa2.52□□□□□ -2.01
TARDBP-220ENST00000618606 YIPF1Q9Y548 306 aa2.52□□□□□ -2.01
TARDBP-220ENST00000618606 ZNF646O15015 1829 aaPredicted RBP2.52□□□□□ -2.01
TARDBP-220ENST00000618606 C1orf226A1L170 272 aa2.51□□□□□ -2.01
TARDBP-220ENST00000618606 EIF4E1BA6NMX2 242 aaKnown RBP2.51□□□□□ -2.01
TARDBP-220ENST00000618606 A8MU10 97 aa2.51□□□□□ -2.01
TARDBP-220ENST00000618606 SNAP23O00161 211 aa2.51□□□□□ -2.01
TARDBP-220ENST00000618606 RNASEH2AO75792 299 aaKnown RBP2.51□□□□□ -2.01
TARDBP-220ENST00000618606 CSPG5O95196 566 aa2.51□□□□□ -2.01
TARDBP-220ENST00000618606 RAF1P04049 648 aa2.51□□□□□ -2.01
TARDBP-220ENST00000618606 HMBSP08397 361 aa2.51□□□□□ -2.01
TARDBP-220ENST00000618606 KRT19P08727 400 aa2.51□□□□□ -2.01
TARDBP-220ENST00000618606 DNAH10OSP0CZ25 163 aa2.51□□□□□ -2.01
TARDBP-220ENST00000618606 MAN1A1P33908 653 aa2.51□□□□□ -2.01
TARDBP-220ENST00000618606 ARL1P40616 181 aaPredicted RBP2.51□□□□□ -2.01
TARDBP-220ENST00000618606 TUBP50607 506 aa2.51□□□□□ -2.01
TARDBP-220ENST00000618606 SNRPD1P62314 119 aaKnown RBP2.51□□□□□ -2.01
TARDBP-220ENST00000618606 TLE2Q04725 743 aa2.51□□□□□ -2.01
TARDBP-220ENST00000618606 CDC16Q13042 620 aa2.51□□□□□ -2.01
TARDBP-220ENST00000618606 DCTN2Q13561 401 aaKnown RBP2.51□□□□□ -2.01
TARDBP-220ENST00000618606 ENPP2Q13822 863 aa2.51□□□□□ -2.01
TARDBP-220ENST00000618606 PDE1CQ14123 709 aaPredicted RBP2.51□□□□□ -2.01
TARDBP-220ENST00000618606 TOMM20Q15388 145 aa2.51□□□□□ -2.01
TARDBP-220ENST00000618606 GTDC1Q4AE62 458 aa2.51□□□□□ -2.01
TARDBP-220ENST00000618606 HYIQ5T013 277 aa2.51□□□□□ -2.01
TARDBP-220ENST00000618606 INTS11Q5TA45 600 aaKnown RBP2.51□□□□□ -2.01
TARDBP-220ENST00000618606 ZNF774Q6NX45 483 aa2.51□□□□□ -2.01
TARDBP-220ENST00000618606 TBC1D1Q86TI0 1168 aaPredicted RBP2.51□□□□□ -2.01
TARDBP-220ENST00000618606 LRRTM4Q86VH4 590 aa2.51□□□□□ -2.01
TARDBP-220ENST00000618606 PTOV1Q86YD1 416 aa2.51□□□□□ -2.01
TARDBP-220ENST00000618606 PLD3Q8IV08 490 aa2.51□□□□□ -2.01
TARDBP-220ENST00000618606 SLC5A8Q8N695 610 aa2.51□□□□□ -2.01
TARDBP-220ENST00000618606 EMC1Q8N766 993 aa2.51□□□□□ -2.01
TARDBP-220ENST00000618606 HM13Q8TCT9 377 aa2.51□□□□□ -2.01
TARDBP-220ENST00000618606 KIF1BPQ96EK5 621 aa2.51□□□□□ -2.01
TARDBP-220ENST00000618606 SEMA3CQ99985 751 aa2.51□□□□□ -2.01
TARDBP-220ENST00000618606 CENPOQ9BU64 300 aa2.51□□□□□ -2.01
TARDBP-220ENST00000618606 SLC26A6Q9BXS9 759 aa2.51□□□□□ -2.01
TARDBP-220ENST00000618606 TMEM39BQ9GZU3 492 aa2.51□□□□□ -2.01
TARDBP-220ENST00000618606 LAT2Q9GZY6 243 aa2.51□□□□□ -2.01
TARDBP-220ENST00000618606 PTTG2Q9NZH5 202 aa2.51□□□□□ -2.01
TARDBP-220ENST00000618606 COQ3Q9NZJ6 369 aa2.51□□□□□ -2.01
TARDBP-220ENST00000618606 COPG2Q9UBF2 871 aa2.51□□□□□ -2.01
TARDBP-220ENST00000618606 KLK13Q9UKR3 277 aa2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms