RNA–Protein interactions for RNA: ENST00000617767.4

CPNE4-214, Transcript of copine 4, humanhuman

TSL 2 BASIC

Gene CPNE4, Length 3,556 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-214ENST00000617767 PAWRQ96IZ0 340 aaKnown RBP5.51□□□□□ -1.53
CPNE4-214ENST00000617767 MOGAT1Q96PD6 335 aa5.51□□□□□ -1.53
CPNE4-214ENST00000617767 SMIM14Q96QK8 99 aa5.51□□□□□ -1.53
CPNE4-214ENST00000617767 EBNA1BP2Q99848 306 aaKnown RBP5.51□□□□□ -1.53
CPNE4-214ENST00000617767 C19orf43Q9BQ61 176 aa5.51□□□□□ -1.53
CPNE4-214ENST00000617767 TUBA1CQ9BQE3 449 aa5.51□□□□□ -1.53
CPNE4-214ENST00000617767 TMEM120AQ9BXJ8 343 aa5.51□□□□□ -1.53
CPNE4-214ENST00000617767 NMUR2Q9GZQ4 415 aa5.51□□□□□ -1.53
CPNE4-214ENST00000617767 SLC6A17Q9H1V8 727 aa5.51□□□□□ -1.53
CPNE4-214ENST00000617767 ZDHHC4Q9NPG8 344 aa5.51□□□□□ -1.53
CPNE4-214ENST00000617767 IARS2Q9NSE4 1012 aaKnown RBP5.51□□□□□ -1.53
CPNE4-214ENST00000617767 TSR3Q9UJK0 312 aaKnown RBP5.51□□□□□ -1.53
CPNE4-214ENST00000617767 RAD54BQ9Y620 910 aa5.51□□□□□ -1.53
CPNE4-214ENST00000617767 SLC12A8A0AV02 714 aa5.51□□□□□ -1.53
CPNE4-214ENST00000617767 ARHGEF37A1IGU5 675 aa5.51□□□□□ -1.53
CPNE4-214ENST00000617767 E7ESA3 106 aa5.51□□□□□ -1.53
CPNE4-214ENST00000617767 J3KR12 359 aa5.51□□□□□ -1.53
CPNE4-214ENST00000617767 TPP1O14773 563 aa5.51□□□□□ -1.53
CPNE4-214ENST00000617767 TYROBPO43914 113 aa5.51□□□□□ -1.53
CPNE4-214ENST00000617767 TSPAN3O60637 253 aa5.51□□□□□ -1.53
CPNE4-214ENST00000617767 ZNF623O75123 536 aa5.51□□□□□ -1.53
CPNE4-214ENST00000617767 GCATO75600 419 aa5.51□□□□□ -1.53
CPNE4-214ENST00000617767 BCL10O95999 233 aa5.51□□□□□ -1.53
CPNE4-214ENST00000617767 IGHA2P01877 340 aa5.51□□□□□ -1.53
CPNE4-214ENST00000617767 GLAP06280 429 aa5.51□□□□□ -1.53
CPNE4-214ENST00000617767 PCSK2P16519 638 aa5.51□□□□□ -1.53
CPNE4-214ENST00000617767 SOX9P48436 509 aa5.51□□□□□ -1.53
CPNE4-214ENST00000617767 SLC11A1P49279 550 aa5.51□□□□□ -1.53
CPNE4-214ENST00000617767 KCNQ1P51787 676 aa5.51□□□□□ -1.53
CPNE4-214ENST00000617767 AKR1D1P51857 326 aa5.51□□□□□ -1.53
CPNE4-214ENST00000617767 RAD23AP54725 363 aa5.51□□□□□ -1.53
CPNE4-214ENST00000617767 CDK16Q00536 496 aa5.51□□□□□ -1.53
CPNE4-214ENST00000617767 DSC1Q08554 894 aa5.51□□□□□ -1.53
CPNE4-214ENST00000617767 ABRQ12979 859 aa5.51□□□□□ -1.53
CPNE4-214ENST00000617767 SLC13A2Q13183 592 aa5.51□□□□□ -1.53
CPNE4-214ENST00000617767 CTBP1Q13363 440 aa5.51□□□□□ -1.53
CPNE4-214ENST00000617767 ZNF267Q14586 743 aaPredicted RBP5.51□□□□□ -1.53
CPNE4-214ENST00000617767 PTPRCAPQ14761 206 aa5.51□□□□□ -1.53
CPNE4-214ENST00000617767 CHI3L2Q15782 390 aa5.51□□□□□ -1.53
CPNE4-214ENST00000617767 PDK4Q16654 411 aa5.51□□□□□ -1.53
CPNE4-214ENST00000617767 GTF2IRD2BQ6EKJ0 949 aa5.51□□□□□ -1.53
CPNE4-214ENST00000617767 DBX2Q6ZNG2 339 aa5.51□□□□□ -1.53
CPNE4-214ENST00000617767 RTL10Q7L3V2 364 aa5.51□□□□□ -1.53
CPNE4-214ENST00000617767 MAMDC2Q7Z304 686 aaPredicted RBP5.51□□□□□ -1.53
CPNE4-214ENST00000617767 MRPL10Q7Z7H8 261 aaKnown RBP5.51□□□□□ -1.53
CPNE4-214ENST00000617767 CDH24Q86UP0 819 aa5.51□□□□□ -1.53
CPNE4-214ENST00000617767 GTF2IRD2Q86UP8 949 aa5.51□□□□□ -1.53
CPNE4-214ENST00000617767 FAM124AQ86V42 546 aa5.51□□□□□ -1.53
CPNE4-214ENST00000617767 ALYREFQ86V81 257 aaKnown RBP5.51□□□□□ -1.53
CPNE4-214ENST00000617767 MINDY2Q8NBR6 621 aa5.51□□□□□ -1.53
CPNE4-214ENST00000617767 KCTD13Q8WZ19 329 aa5.51□□□□□ -1.53
CPNE4-214ENST00000617767 RBM18Q96H35 190 aaKnown RBP5.51□□□□□ -1.53
CPNE4-214ENST00000617767 OXNAD1Q96HP4 312 aaPredicted RBP5.51□□□□□ -1.53
CPNE4-214ENST00000617767 SUSD3Q96L08 255 aa5.51□□□□□ -1.53
CPNE4-214ENST00000617767 C12orf57Q99622 126 aa5.51□□□□□ -1.53
CPNE4-214ENST00000617767 C1orf50Q9BV19 199 aa5.51□□□□□ -1.53
CPNE4-214ENST00000617767 MLPHQ9BV36 600 aaPredicted RBP5.51□□□□□ -1.53
CPNE4-214ENST00000617767 SLC39A8Q9C0K1 460 aa5.51□□□□□ -1.53
CPNE4-214ENST00000617767 NT5MQ9NPB1 228 aa5.51□□□□□ -1.53
CPNE4-214ENST00000617767 C20orf96Q9NUD7 363 aaPredicted RBP5.51□□□□□ -1.53
CPNE4-214ENST00000617767 SLC2A6Q9UGQ3 507 aa5.51□□□□□ -1.53
CPNE4-214ENST00000617767 ADAM28Q9UKQ2 775 aa5.51□□□□□ -1.53
CPNE4-214ENST00000617767 EIF3LQ9Y262 564 aaKnown RBP5.51□□□□□ -1.53
CPNE4-214ENST00000617767 MYRFQ9Y2G1 1151 aa5.51□□□□□ -1.53
CPNE4-214ENST00000617767 SNX13Q9Y5W8 968 aa5.51□□□□□ -1.53
CPNE4-214ENST00000617767 PMF1-BGLAPU3KQ54 211 aa5.51□□□□□ -1.53
CPNE4-214ENST00000617767 ZNF236Q9UL36 1845 aa5.51□□□□□ -1.53
CPNE4-214ENST00000617767 VPS13AQ96RL7 3174 aa5.51□□□□□ -1.53
CPNE4-214ENST00000617767 FAM237BA0A1B0GVD1 139 aa5.51□□□□□ -1.53
CPNE4-214ENST00000617767 HMX2A2RU54 273 aa5.51□□□□□ -1.53
CPNE4-214ENST00000617767 SDR42E2A6NKP2 422 aa5.51□□□□□ -1.53
CPNE4-214ENST00000617767 A8MV72 311 aaPredicted RBP5.51□□□□□ -1.53
CPNE4-214ENST00000617767 CLDN25C9JDP6 229 aa5.51□□□□□ -1.53
CPNE4-214ENST00000617767 BET1O15155 118 aa5.51□□□□□ -1.53
CPNE4-214ENST00000617767 PHGDHO43175 533 aaKnown RBP5.51□□□□□ -1.53
CPNE4-214ENST00000617767 SYNCRIPO60506 623 aaKnown RBP5.51□□□□□ -1.53
CPNE4-214ENST00000617767 RFPL2O75678 378 aa5.51□□□□□ -1.53
CPNE4-214ENST00000617767 KRT37O76014 449 aa5.51□□□□□ -1.53
CPNE4-214ENST00000617767 HMGN1P05114 100 aa5.51□□□□□ -1.53
CPNE4-214ENST00000617767 CHRM5P08912 532 aaPredicted RBP5.51□□□□□ -1.53
CPNE4-214ENST00000617767 ACRP10323 421 aa5.51□□□□□ -1.53
CPNE4-214ENST00000617767 DDCP20711 480 aa5.51□□□□□ -1.53
CPNE4-214ENST00000617767 NMBRP28336 390 aa5.51□□□□□ -1.53
CPNE4-214ENST00000617767 OR1D2P34982 312 aa5.51□□□□□ -1.53
CPNE4-214ENST00000617767 GARSP41250 739 aaKnown RBP5.51□□□□□ -1.53
CPNE4-214ENST00000617767 RPL35P42766 123 aaKnown RBP5.51□□□□□ -1.53
CPNE4-214ENST00000617767 RPP38P78345 283 aaKnown RBP5.51□□□□□ -1.53
CPNE4-214ENST00000617767 SLC25A3Q00325 362 aa5.51□□□□□ -1.53
CPNE4-214ENST00000617767 IRF9Q00978 393 aa5.51□□□□□ -1.53
CPNE4-214ENST00000617767 UBE3AQ05086 875 aa5.51□□□□□ -1.53
CPNE4-214ENST00000617767 NFATC3Q12968 1075 aa5.51□□□□□ -1.53
CPNE4-214ENST00000617767 NR1H3Q13133 447 aa5.51□□□□□ -1.53
CPNE4-214ENST00000617767 TARDBPQ13148 414 aaKnown RBP eCLIP5.51□□□□□ -1.53
CPNE4-214ENST00000617767 ZNF846Q147U1 533 aa5.51□□□□□ -1.53
CPNE4-214ENST00000617767 CACHD1Q5VU97 1274 aa5.51□□□□□ -1.53
CPNE4-214ENST00000617767 C16orf59Q7L2K0 433 aa5.51□□□□□ -1.53
CPNE4-214ENST00000617767 LIMS2Q7Z4I7 341 aa5.51□□□□□ -1.53
CPNE4-214ENST00000617767 COLGALT2Q8IYK4 626 aa5.51□□□□□ -1.53
CPNE4-214ENST00000617767 CNTD1Q8N815 330 aa5.51□□□□□ -1.53
CPNE4-214ENST00000617767 TMEM80Q96HE8 168 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms