RNA–Protein interactions for RNA: ENST00000617456.1

GPC6-202, Transcript of glypican 6, humanhuman

TSL 3 BASIC

Gene GPC6, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-202ENST00000617456 CYP2A6P11509 494 aaPredicted RBP8.47□□□□□ -1.05
GPC6-202ENST00000617456 ZNF30P17039 623 aa8.47□□□□□ -1.05
GPC6-202ENST00000617456 MX2P20592 715 aa8.47□□□□□ -1.05
GPC6-202ENST00000617456 ENDOUP21128 410 aaKnown RBP8.47□□□□□ -1.05
GPC6-202ENST00000617456 CA4P22748 312 aa8.47□□□□□ -1.05
GPC6-202ENST00000617456 ARHGAP25P42331 645 aa8.47□□□□□ -1.05
GPC6-202ENST00000617456 GPR3P46089 330 aa8.47□□□□□ -1.05
GPC6-202ENST00000617456 RGRP47804 291 aa8.47□□□□□ -1.05
GPC6-202ENST00000617456 UQCRFS1P47985 274 aa8.47□□□□□ -1.05
GPC6-202ENST00000617456 TUBA4AP68366 448 aa8.47□□□□□ -1.05
GPC6-202ENST00000617456 KLRB1Q12918 225 aa8.47□□□□□ -1.05
GPC6-202ENST00000617456 TUBA3CQ13748 450 aa8.47□□□□□ -1.05
GPC6-202ENST00000617456 SEPT6Q14141 434 aa8.47□□□□□ -1.05
GPC6-202ENST00000617456 PAFAH1B3Q15102 231 aaKnown RBP8.47□□□□□ -1.05
GPC6-202ENST00000617456 TCEAL1Q15170 157 aa8.47□□□□□ -1.05
GPC6-202ENST00000617456 SLC18A3Q16572 532 aa8.47□□□□□ -1.05
GPC6-202ENST00000617456 BEND6Q5SZJ8 279 aaPredicted RBP8.47□□□□□ -1.05
GPC6-202ENST00000617456 NEPROQ6NW34 567 aa8.47□□□□□ -1.05
GPC6-202ENST00000617456 DOK6Q6PKX4 331 aa8.47□□□□□ -1.05
GPC6-202ENST00000617456 H2AFVQ71UI9 128 aa8.47□□□□□ -1.05
GPC6-202ENST00000617456 ZNF765Q7L2R6 523 aa8.47□□□□□ -1.05
GPC6-202ENST00000617456 MAATS1Q7Z4T9 603 aa8.47□□□□□ -1.05
GPC6-202ENST00000617456 LUZP1Q86V48 1076 aa8.47□□□□□ -1.05
GPC6-202ENST00000617456 C17orf82Q86X59 251 aaPredicted RBP8.47□□□□□ -1.05
GPC6-202ENST00000617456 ATPAF2Q8N5M1 289 aa8.47□□□□□ -1.05
GPC6-202ENST00000617456 TEX19Q8NA77 164 aa8.47□□□□□ -1.05
GPC6-202ENST00000617456 PTCD2Q8WV60 388 aaKnown RBP8.47□□□□□ -1.05
GPC6-202ENST00000617456 STARD8Q92502 1023 aa8.47□□□□□ -1.05
GPC6-202ENST00000617456 AHCYL2Q96HN2 611 aaKnown RBP8.47□□□□□ -1.05
GPC6-202ENST00000617456 COQ10AQ96MF6 247 aa8.47□□□□□ -1.05
GPC6-202ENST00000617456 SMC6Q96SB8 1091 aa8.47□□□□□ -1.05
GPC6-202ENST00000617456 DNAJC7Q99615 494 aa8.47□□□□□ -1.05
GPC6-202ENST00000617456 NUP85Q9BW27 656 aa8.47□□□□□ -1.05
GPC6-202ENST00000617456 TEX101Q9BY14 249 aa8.47□□□□□ -1.05
GPC6-202ENST00000617456 ASPSCR1Q9BZE9 553 aa8.47□□□□□ -1.05
GPC6-202ENST00000617456 XPO4Q9C0E2 1151 aaKnown RBP8.47□□□□□ -1.05
GPC6-202ENST00000617456 POLR1EQ9GZS1 481 aaKnown RBP8.47□□□□□ -1.05
GPC6-202ENST00000617456 THAP2Q9H0W7 228 aa8.47□□□□□ -1.05
GPC6-202ENST00000617456 CASS4Q9NQ75 786 aa8.47□□□□□ -1.05
GPC6-202ENST00000617456 GPATCH2LQ9NWQ4 482 aa8.47□□□□□ -1.05
GPC6-202ENST00000617456 TRNAU1APQ9NX07 287 aaKnown RBP8.47□□□□□ -1.05
GPC6-202ENST00000617456 KCNK4Q9NYG8 393 aa8.47□□□□□ -1.05
GPC6-202ENST00000617456 MYO1AQ9UBC5 1043 aa8.47□□□□□ -1.05
GPC6-202ENST00000617456 PLEKHB1Q9UF11 243 aaPredicted RBP8.47□□□□□ -1.05
GPC6-202ENST00000617456 ANAPC7Q9UJX3 599 aa8.47□□□□□ -1.05
GPC6-202ENST00000617456 PILRAQ9UKJ1 303 aa8.47□□□□□ -1.05
GPC6-202ENST00000617456 PYCARDQ9ULZ3 195 aa8.47□□□□□ -1.05
GPC6-202ENST00000617456 NENFQ9UMX5 172 aa8.47□□□□□ -1.05
GPC6-202ENST00000617456 PLEKHM1Q9Y4G2 1056 aa8.47□□□□□ -1.05
GPC6-202ENST00000617456 TIMM22Q9Y584 194 aa8.47□□□□□ -1.05
GPC6-202ENST00000617456 PCDHGB3Q9Y5G1 929 aa8.47□□□□□ -1.05
GPC6-202ENST00000617456 MRPS18BQ9Y676 258 aaKnown RBP8.47□□□□□ -1.05
GPC6-202ENST00000617456 CENPEQ02224 2701 aa8.47□□□□□ -1.05
GPC6-202ENST00000617456 IGHV1OR21-1A0A087WYE8 117 aa8.46□□□□□ -1.06
GPC6-202ENST00000617456 TMEM238LA0A1B0GVL6 79 aa8.46□□□□□ -1.06
GPC6-202ENST00000617456 TMEM247A6NEH6 219 aa8.46□□□□□ -1.06
GPC6-202ENST00000617456 K7EM74 188 aa8.46□□□□□ -1.06
GPC6-202ENST00000617456 FZD6O60353 706 aa8.46□□□□□ -1.06
GPC6-202ENST00000617456 PROSCO94903 275 aa8.46□□□□□ -1.06
GPC6-202ENST00000617456 HEXIM1O94992 359 aaKnown RBP8.46□□□□□ -1.06
GPC6-202ENST00000617456 AGFG2O95081 481 aa8.46□□□□□ -1.06
GPC6-202ENST00000617456 FUCA1P04066 466 aa8.46□□□□□ -1.06
GPC6-202ENST00000617456 CEACAM5P06731 702 aa8.46□□□□□ -1.06
GPC6-202ENST00000617456 GM2AP17900 193 aa8.46□□□□□ -1.06
GPC6-202ENST00000617456 TCN2P20062 427 aa8.46□□□□□ -1.06
GPC6-202ENST00000617456 AMPD1P23109 780 aa8.46□□□□□ -1.06
GPC6-202ENST00000617456 MAP4P27816 1152 aaKnown RBP8.46□□□□□ -1.06
GPC6-202ENST00000617456 VIPR1P32241 457 aa8.46□□□□□ -1.06
GPC6-202ENST00000617456 GARSP41250 739 aaKnown RBP8.46□□□□□ -1.06
GPC6-202ENST00000617456 MMP13P45452 471 aa8.46□□□□□ -1.06
GPC6-202ENST00000617456 POLD2P49005 469 aa8.46□□□□□ -1.06
GPC6-202ENST00000617456 ARSEP51690 589 aa8.46□□□□□ -1.06
GPC6-202ENST00000617456 CLCN2P51788 898 aa8.46□□□□□ -1.06
GPC6-202ENST00000617456 PMS2P54278 862 aa8.46□□□□□ -1.06
GPC6-202ENST00000617456 RAB15P59190 212 aa8.46□□□□□ -1.06
GPC6-202ENST00000617456 CTBSQ01459 385 aa8.46□□□□□ -1.06
GPC6-202ENST00000617456 GALNT2Q10471 571 aa8.46□□□□□ -1.06
GPC6-202ENST00000617456 CBX3Q13185 183 aa8.46□□□□□ -1.06
GPC6-202ENST00000617456 NR1D2Q14995 579 aa8.46□□□□□ -1.06
GPC6-202ENST00000617456 NAA25Q14CX7 972 aa8.46□□□□□ -1.06
GPC6-202ENST00000617456 IFI16Q16666 785 aaKnown RBP8.46□□□□□ -1.06
GPC6-202ENST00000617456 ASTE1Q2TB18 679 aaPredicted RBP8.46□□□□□ -1.06
GPC6-202ENST00000617456 CCDC153Q494R4 210 aa8.46□□□□□ -1.06
GPC6-202ENST00000617456 ARMC12Q5T9G4 340 aa8.46□□□□□ -1.06
GPC6-202ENST00000617456 LRRC38Q5VT99 294 aa8.46□□□□□ -1.06
GPC6-202ENST00000617456 USP45Q70EL2 814 aa8.46□□□□□ -1.06
GPC6-202ENST00000617456 TIPARPQ7Z3E1 657 aaKnown RBP8.46□□□□□ -1.06
GPC6-202ENST00000617456 NANOGNBQ7Z5D8 188 aa8.46□□□□□ -1.06
GPC6-202ENST00000617456 HEATR4Q86WZ0 1026 aa8.46□□□□□ -1.06
GPC6-202ENST00000617456 NAGSQ8N159 534 aa8.46□□□□□ -1.06
GPC6-202ENST00000617456 CTNNBL1Q8WYA6 563 aaPredicted RBP8.46□□□□□ -1.06
GPC6-202ENST00000617456 HSPH1Q92598 858 aa8.46□□□□□ -1.06
GPC6-202ENST00000617456 FAF2Q96CS3 445 aa8.46□□□□□ -1.06
GPC6-202ENST00000617456 RTP4Q96DX8 246 aa8.46□□□□□ -1.06
GPC6-202ENST00000617456 NUS1Q96E22 293 aa8.46□□□□□ -1.06
GPC6-202ENST00000617456 SCARF2Q96GP6 870 aaPredicted RBP8.46□□□□□ -1.06
GPC6-202ENST00000617456 LYSMD1Q96S90 227 aa8.46□□□□□ -1.06
GPC6-202ENST00000617456 EFHD1Q9BUP0 239 aa8.46□□□□□ -1.06
GPC6-202ENST00000617456 FUT8Q9BYC5 575 aa8.46□□□□□ -1.06
GPC6-202ENST00000617456 NOD2Q9HC29 1040 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms