RNA–Protein interactions for RNA: ENST00000617339.4

SHROOM1-208, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHROOM1, Length 3,638 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-208ENST00000617339 ADGRF1Q5T601 910 aa14.32□□□□□ -0.12
SHROOM1-208ENST00000617339 BRSK1Q8TDC3 778 aa14.32□□□□□ -0.12
SHROOM1-208ENST00000617339 DLG3Q92796 817 aa14.32□□□□□ -0.12
SHROOM1-208ENST00000617339 SLX1AQ9BQ83 275 aa14.32□□□□□ -0.12
SHROOM1-208ENST00000617339 LATS2Q9NRM7 1088 aa14.32□□□□□ -0.12
SHROOM1-208ENST00000617339 DAPK2Q9UIK4 370 aa14.32□□□□□ -0.12
SHROOM1-208ENST00000617339 CNOT6Q9ULM6 557 aaKnown RBP14.32□□□□□ -0.12
SHROOM1-208ENST00000617339 CFAP99D6REC4 459 aa14.32□□□□□ -0.12
SHROOM1-208ENST00000617339 TRIM38O00635 465 aa14.32□□□□□ -0.12
SHROOM1-208ENST00000617339 BAIAP3O94812 1187 aa14.32□□□□□ -0.12
SHROOM1-208ENST00000617339 FGBP02675 491 aa14.32□□□□□ -0.12
SHROOM1-208ENST00000617339 MT-ND1P03886 318 aa14.32□□□□□ -0.12
SHROOM1-208ENST00000617339 C8AP07357 584 aa14.32□□□□□ -0.12
SHROOM1-208ENST00000617339 ITGB8P26012 769 aa14.32□□□□□ -0.12
SHROOM1-208ENST00000617339 GRIA3P42263 894 aa14.32□□□□□ -0.12
SHROOM1-208ENST00000617339 TXNL4AP83876 142 aaKnown RBP14.32□□□□□ -0.12
SHROOM1-208ENST00000617339 ZNF829Q3KNS6 432 aaPredicted RBP14.32□□□□□ -0.12
SHROOM1-208ENST00000617339 VPS26BQ4G0F5 336 aa14.32□□□□□ -0.12
SHROOM1-208ENST00000617339 CHSY3Q70JA7 882 aa14.32□□□□□ -0.12
SHROOM1-208ENST00000617339 SPRED2Q7Z698 418 aa14.32□□□□□ -0.12
SHROOM1-208ENST00000617339 LRCH3Q96II8 777 aa14.32□□□□□ -0.12
SHROOM1-208ENST00000617339 ZNF597Q96LX8 424 aa14.32□□□□□ -0.12
SHROOM1-208ENST00000617339 EGFL8Q99944 293 aa14.32□□□□□ -0.12
SHROOM1-208ENST00000617339 BOCQ9BWV1 1114 aa14.32□□□□□ -0.12
SHROOM1-208ENST00000617339 GID8Q9NWU2 228 aa14.32□□□□□ -0.12
SHROOM1-208ENST00000617339 ANKRD6Q9Y2G4 727 aa14.32□□□□□ -0.12
SHROOM1-208ENST00000617339 ST14Q9Y5Y6 855 aa14.32□□□□□ -0.12
SHROOM1-208ENST00000617339 DGKBQ9Y6T7 804 aa14.32□□□□□ -0.12
SHROOM1-208ENST00000617339 NUP214P35658 2090 aaPredicted RBP14.31□□□□□ -0.12
SHROOM1-208ENST00000617339 ACOT8O14734 319 aa14.31□□□□□ -0.12
SHROOM1-208ENST00000617339 TEX28O15482 410 aa14.31□□□□□ -0.12
SHROOM1-208ENST00000617339 RPP40O75818 363 aaKnown RBP14.31□□□□□ -0.12
SHROOM1-208ENST00000617339 HMGA1P17096 107 aaKnown RBP14.31□□□□□ -0.12
SHROOM1-208ENST00000617339 HOXC13P31276 330 aa14.31□□□□□ -0.12
SHROOM1-208ENST00000617339 MAGEA11P43364 429 aa14.31□□□□□ -0.12
SHROOM1-208ENST00000617339 SH3BP2P78314 561 aa14.31□□□□□ -0.12
SHROOM1-208ENST00000617339 MRPL58Q14197 206 aaKnown RBP14.31□□□□□ -0.12
SHROOM1-208ENST00000617339 TECRLQ5HYJ1 363 aa14.31□□□□□ -0.12
SHROOM1-208ENST00000617339 TMC5Q6UXY8 1006 aa14.31□□□□□ -0.12
SHROOM1-208ENST00000617339 HPS1Q92902 700 aa14.31□□□□□ -0.12
SHROOM1-208ENST00000617339 TSPAN17Q96FV3 270 aa14.31□□□□□ -0.12
SHROOM1-208ENST00000617339 TSEN34Q9BSV6 310 aaKnown RBP14.31□□□□□ -0.12
SHROOM1-208ENST00000617339 ZNHIT2Q9UHR6 403 aa14.31□□□□□ -0.12
SHROOM1-208ENST00000617339 SQORQ9Y6N5 450 aa14.31□□□□□ -0.12
SHROOM1-208ENST00000617339 IQCJ-SCHIP1C9J366 451 aaPredicted RBP14.31□□□□□ -0.12
SHROOM1-208ENST00000617339 SNX2O60749 519 aa14.31□□□□□ -0.12
SHROOM1-208ENST00000617339 APOA4P06727 396 aa14.31□□□□□ -0.12
SHROOM1-208ENST00000617339 CLCN5P51795 746 aa14.31□□□□□ -0.12
SHROOM1-208ENST00000617339 RAB39AQ14964 217 aa14.31□□□□□ -0.12
SHROOM1-208ENST00000617339 RGS21Q2M5E4 152 aa14.31□□□□□ -0.12
SHROOM1-208ENST00000617339 PTRHD1Q6GMV3 140 aaKnown RBP14.31□□□□□ -0.12
SHROOM1-208ENST00000617339 RFLNAQ6ZTI6 216 aa14.31□□□□□ -0.12
SHROOM1-208ENST00000617339 CCDC80Q76M96 950 aa14.31□□□□□ -0.12
SHROOM1-208ENST00000617339 BBS7Q8IWZ6 715 aa14.31□□□□□ -0.12
SHROOM1-208ENST00000617339 REM2Q8IYK8 340 aaPredicted RBP14.31□□□□□ -0.12
SHROOM1-208ENST00000617339 TTC30BQ8N4P2 665 aa14.31□□□□□ -0.12
SHROOM1-208ENST00000617339 SORCS1Q8WY21 1168 aa14.31□□□□□ -0.12
SHROOM1-208ENST00000617339 VPS33AQ96AX1 596 aa14.31□□□□□ -0.12
SHROOM1-208ENST00000617339 KLHL25Q9H0H3 589 aa14.31□□□□□ -0.12
SHROOM1-208ENST00000617339 SMOXQ9NWM0 555 aa14.31□□□□□ -0.12
SHROOM1-208ENST00000617339 ANGPTL3Q9Y5C1 460 aa14.31□□□□□ -0.12
SHROOM1-208ENST00000617339 FADS3Q9Y5Q0 445 aa14.31□□□□□ -0.12
SHROOM1-208ENST00000617339 MAP1BP46821 2468 aaKnown RBP14.31□□□□□ -0.12
SHROOM1-208ENST00000617339 TRPM7Q96QT4 1865 aa14.3□□□□□ -0.12
SHROOM1-208ENST00000617339 ANKRD66B4E2M5 251 aa14.3□□□□□ -0.12
SHROOM1-208ENST00000617339 CLDN7O95471 211 aa14.3□□□□□ -0.12
SHROOM1-208ENST00000617339 CTSOP43234 321 aaPredicted RBP14.3□□□□□ -0.12
SHROOM1-208ENST00000617339 GRB7Q14451 532 aa14.3□□□□□ -0.12
SHROOM1-208ENST00000617339 HMBOX1Q6NT76 420 aa14.3□□□□□ -0.12
SHROOM1-208ENST00000617339 UGT3A1Q6NUS8 523 aa14.3□□□□□ -0.12
SHROOM1-208ENST00000617339 PIWIL4Q7Z3Z4 852 aaKnown RBP14.3□□□□□ -0.12
SHROOM1-208ENST00000617339 FBXO39Q8N4B4 442 aa14.3□□□□□ -0.12
SHROOM1-208ENST00000617339 TMCO5AQ8N6Q1 288 aa14.3□□□□□ -0.12
SHROOM1-208ENST00000617339 LINGO1Q96FE5 620 aa14.3□□□□□ -0.12
SHROOM1-208ENST00000617339 C11orf49Q9H6J7 331 aa14.3□□□□□ -0.12
SHROOM1-208ENST00000617339 PCDH12Q9NPG4 1184 aa14.3□□□□□ -0.12
SHROOM1-208ENST00000617339 NRG2O14511 850 aaPredicted RBP14.3□□□□□ -0.12
SHROOM1-208ENST00000617339 SDHDO14521 159 aa14.3□□□□□ -0.12
SHROOM1-208ENST00000617339 PIP5K1BO14986 540 aa14.3□□□□□ -0.12
SHROOM1-208ENST00000617339 CLASP2O75122 1294 aaKnown RBP14.3□□□□□ -0.12
SHROOM1-208ENST00000617339 RBP1P09455 135 aa14.3□□□□□ -0.12
SHROOM1-208ENST00000617339 NNMTP40261 264 aa14.3□□□□□ -0.12
SHROOM1-208ENST00000617339 LEPRP48357 1165 aaKnown RBP14.3□□□□□ -0.12
SHROOM1-208ENST00000617339 YBEYP58557 167 aaPredicted RBP14.3□□□□□ -0.12
SHROOM1-208ENST00000617339 ARF5P84085 180 aa14.3□□□□□ -0.12
SHROOM1-208ENST00000617339 DMPKQ09013 629 aa14.3□□□□□ -0.12
SHROOM1-208ENST00000617339 ARTNQ5T4W7 220 aa14.3□□□□□ -0.12
SHROOM1-208ENST00000617339 RAB44Q7Z6P3 723 aaPredicted RBP14.3□□□□□ -0.12
SHROOM1-208ENST00000617339 ALDH16A1Q8IZ83 802 aa14.3□□□□□ -0.12
SHROOM1-208ENST00000617339 CANT1Q8WVQ1 401 aa14.3□□□□□ -0.12
SHROOM1-208ENST00000617339 TAMM41Q96BW9 452 aa14.3□□□□□ -0.12
SHROOM1-208ENST00000617339 CNDP1Q96KN2 507 aa14.3□□□□□ -0.12
SHROOM1-208ENST00000617339 TRIOO75962 3097 aa14.3□□□□□ -0.12
SHROOM1-208ENST00000617339 A0A087X1B8 175 aa14.3□□□□□ -0.12
SHROOM1-208ENST00000617339 SLC7A4O43246 635 aa14.3□□□□□ -0.12
SHROOM1-208ENST00000617339 FGF1P05230 155 aa14.3□□□□□ -0.12
SHROOM1-208ENST00000617339 AKT1P31749 480 aa14.3□□□□□ -0.12
SHROOM1-208ENST00000617339 DIO3P55073 304 aa14.3□□□□□ -0.12
SHROOM1-208ENST00000617339 PRKCQQ04759 706 aa14.3□□□□□ -0.12
SHROOM1-208ENST00000617339 FRA10AC1Q70Z53 315 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms