RNA–Protein interactions for RNA: ENST00000617185.4

TP53-222, Transcript of tumor protein p53, human

TSL 1 (best) BASIC

Gene TP53, Length 2,724 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TP53-222	ENST00000617185	ZYG11A	Q6WRX3	759 aa		11.44	□□□□□ -0.58
TP53-222	ENST00000617185	HDDC2	Q7Z4H3	204 aa		11.44	□□□□□ -0.58
TP53-222	ENST00000617185	CLEC14A	Q86T13	490 aa		11.44	□□□□□ -0.58
TP53-222	ENST00000617185	ARFGAP1	Q8N6T3	406 aa		11.44	□□□□□ -0.58
TP53-222	ENST00000617185	OSMR	Q99650	979 aa		11.44	□□□□□ -0.58
TP53-222	ENST00000617185	ACE2	Q9BYF1	805 aa	Predicted RBP	11.44	□□□□□ -0.58
TP53-222	ENST00000617185	NTN4	Q9HB63	628 aa		11.44	□□□□□ -0.58
TP53-222	ENST00000617185	KLK14	Q9P0G3	267 aa		11.44	□□□□□ -0.58
TP53-222	ENST00000617185	INTS6	Q9UL03	887 aa	Known RBP	11.44	□□□□□ -0.58
TP53-222	ENST00000617185	TMPRSS11E	Q9UL52	423 aa		11.44	□□□□□ -0.58
TP53-222	ENST00000617185	SNX7	Q9UNH6	387 aa		11.44	□□□□□ -0.58
TP53-222	ENST00000617185	EFCAB9	A8MZ26	197 aa		11.44	□□□□□ -0.58
TP53-222	ENST00000617185	ANGPT2	O15123	496 aa		11.44	□□□□□ -0.58
TP53-222	ENST00000617185	CABYR	O75952	493 aa		11.44	□□□□□ -0.58
TP53-222	ENST00000617185	CNTN5	O94779	1100 aa		11.44	□□□□□ -0.58
TP53-222	ENST00000617185	CELF2	O95319	508 aa	Known RBP	11.44	□□□□□ -0.58
TP53-222	ENST00000617185	AGXT	P21549	392 aa		11.44	□□□□□ -0.58
TP53-222	ENST00000617185	AKAP5	P24588	427 aa		11.44	□□□□□ -0.58
TP53-222	ENST00000617185	SLC15A1	P46059	708 aa		11.44	□□□□□ -0.58
TP53-222	ENST00000617185	NKX3-2	P78367	333 aa		11.44	□□□□□ -0.58
TP53-222	ENST00000617185	CD47	Q08722	323 aa		11.44	□□□□□ -0.58
TP53-222	ENST00000617185	FADD	Q13158	208 aa		11.44	□□□□□ -0.58
TP53-222	ENST00000617185	LRRC26	Q2I0M4	334 aa		11.44	□□□□□ -0.58
TP53-222	ENST00000617185	CTU2	Q2VPK5	515 aa	Known RBP	11.44	□□□□□ -0.58
TP53-222	ENST00000617185	PLEKHG6	Q3KR16	790 aa		11.44	□□□□□ -0.58
TP53-222	ENST00000617185	RBM20	Q5T481	1227 aa	Known RBP	11.44	□□□□□ -0.58
TP53-222	ENST00000617185	GARNL3	Q5VVW2	1013 aa		11.44	□□□□□ -0.58
TP53-222	ENST00000617185	EFL1	Q7Z2Z2	1120 aa	Known RBP	11.44	□□□□□ -0.58
TP53-222	ENST00000617185	TMEM199	Q8N511	208 aa		11.44	□□□□□ -0.58
TP53-222	ENST00000617185	KDM1B	Q8NB78	822 aa		11.44	□□□□□ -0.58
TP53-222	ENST00000617185	OR6J1	Q8NGC5	347 aa		11.44	□□□□□ -0.58
TP53-222	ENST00000617185	SETD6	Q8TBK2	473 aa		11.44	□□□□□ -0.58
TP53-222	ENST00000617185	TMCO6	Q96DC7	493 aa		11.44	□□□□□ -0.58
TP53-222	ENST00000617185	CPNE1	Q99829	537 aa		11.44	□□□□□ -0.58
TP53-222	ENST00000617185	ELOVL4	Q9GZR5	314 aa		11.44	□□□□□ -0.58
TP53-222	ENST00000617185	MUC13	Q9H3R2	512 aa		11.44	□□□□□ -0.58
TP53-222	ENST00000617185	FAM49B	Q9NUQ9	324 aa		11.44	□□□□□ -0.58
TP53-222	ENST00000617185	FAM118A	Q9NWS6	357 aa		11.44	□□□□□ -0.58
TP53-222	ENST00000617185	MRPL39	Q9NYK5	338 aa	Known RBP	11.44	□□□□□ -0.58
TP53-222	ENST00000617185		M0QYV0	167 aa		11.44	□□□□□ -0.58
TP53-222	ENST00000617185	LSM8	O95777	96 aa	Known RBP	11.44	□□□□□ -0.58
TP53-222	ENST00000617185	MYL3	P08590	195 aa		11.44	□□□□□ -0.58
TP53-222	ENST00000617185	PSMB9	P28065	219 aa		11.44	□□□□□ -0.58
TP53-222	ENST00000617185	SPR	P35270	261 aa	Predicted RBP	11.44	□□□□□ -0.58
TP53-222	ENST00000617185	BEX3	Q00994	111 aa		11.44	□□□□□ -0.58
TP53-222	ENST00000617185	GRM1	Q13255	1194 aa		11.44	□□□□□ -0.58
TP53-222	ENST00000617185	PON2	Q15165	354 aa		11.44	□□□□□ -0.58
TP53-222	ENST00000617185	GRIK4	Q16099	956 aa		11.44	□□□□□ -0.58
TP53-222	ENST00000617185	MARCH8	Q5T0T0	291 aa		11.44	□□□□□ -0.58
TP53-222	ENST00000617185	DENND5A	Q6IQ26	1287 aa		11.44	□□□□□ -0.58
TP53-222	ENST00000617185	ILDR2	Q71H61	639 aa		11.44	□□□□□ -0.58
TP53-222	ENST00000617185	NRARP	Q7Z6K4	114 aa		11.44	□□□□□ -0.58
TP53-222	ENST00000617185	AMER2	Q8N7J2	671 aa		11.44	□□□□□ -0.58
TP53-222	ENST00000617185	GLB1L3	Q8NCI6	653 aa	Predicted RBP	11.44	□□□□□ -0.58
TP53-222	ENST00000617185	OR4M1	Q8NGD0	313 aa		11.44	□□□□□ -0.58
TP53-222	ENST00000617185	SMOC2	Q9H3U7	446 aa		11.44	□□□□□ -0.58
TP53-222	ENST00000617185	TOR3A	Q9H497	397 aa		11.44	□□□□□ -0.58
TP53-222	ENST00000617185	DHX35	Q9H5Z1	703 aa	Known RBP	11.44	□□□□□ -0.58
TP53-222	ENST00000617185	ENTPD7	Q9NQZ7	604 aa		11.44	□□□□□ -0.58
TP53-222	ENST00000617185	TRMT13	Q9NUP7	481 aa	Known RBP	11.44	□□□□□ -0.58
TP53-222	ENST00000617185	DPP3	Q9NY33	737 aa		11.44	□□□□□ -0.58
TP53-222	ENST00000617185	PCDH10	Q9P2E7	1040 aa		11.44	□□□□□ -0.58
TP53-222	ENST00000617185	CACNG4	Q9UBN1	327 aa		11.44	□□□□□ -0.58
TP53-222	ENST00000617185	SNX6	Q9UNH7	406 aa		11.44	□□□□□ -0.58
TP53-222	ENST00000617185	DIMT1	Q9UNQ2	313 aa	Known RBP	11.44	□□□□□ -0.58
TP53-222	ENST00000617185	LINC00862	A6NCI5	91 aa		11.43	□□□□□ -0.58
TP53-222	ENST00000617185	OR6C70	A6NIJ9	312 aa		11.43	□□□□□ -0.58
TP53-222	ENST00000617185	BBIP1	A8MTZ0	92 aa		11.43	□□□□□ -0.58
TP53-222	ENST00000617185	LOC110117498-PIK3R3	F6TDL0	507 aa		11.43	□□□□□ -0.58
TP53-222	ENST00000617185	ATG13	O75143	517 aa		11.43	□□□□□ -0.58
TP53-222	ENST00000617185	HPR	P00739	348 aa		11.43	□□□□□ -0.58
TP53-222	ENST00000617185	DNAJB2	P25686	324 aa		11.43	□□□□□ -0.58
TP53-222	ENST00000617185	GNPDA1	P46926	289 aa		11.43	□□□□□ -0.58
TP53-222	ENST00000617185	SOX9	P48436	509 aa		11.43	□□□□□ -0.58
TP53-222	ENST00000617185	CLK1	P49759	484 aa	Known RBP	11.43	□□□□□ -0.58
TP53-222	ENST00000617185	MGAT3	Q09327	533 aa		11.43	□□□□□ -0.58
TP53-222	ENST00000617185	TNK1	Q13470	666 aa		11.43	□□□□□ -0.58
TP53-222	ENST00000617185	DGCR6	Q14129	220 aa		11.43	□□□□□ -0.58
TP53-222	ENST00000617185	CLCA4	Q14CN2	919 aa		11.43	□□□□□ -0.58
TP53-222	ENST00000617185	CCL14	Q16627	93 aa		11.43	□□□□□ -0.58
TP53-222	ENST00000617185	DDR2	Q16832	855 aa		11.43	□□□□□ -0.58
TP53-222	ENST00000617185	PIK3R6	Q5UE93	754 aa		11.43	□□□□□ -0.58
TP53-222	ENST00000617185	TMEM65	Q6PI78	240 aa		11.43	□□□□□ -0.58
TP53-222	ENST00000617185	SPPL2B	Q8TCT7	592 aa		11.43	□□□□□ -0.58
TP53-222	ENST00000617185	KCTD4	Q8WVF5	259 aa		11.43	□□□□□ -0.58
TP53-222	ENST00000617185	NCLN	Q969V3	563 aa		11.43	□□□□□ -0.58
TP53-222	ENST00000617185	MARC2	Q969Z3	335 aa		11.43	□□□□□ -0.58
TP53-222	ENST00000617185	C18orf25	Q96B23	403 aa	Predicted RBP	11.43	□□□□□ -0.58
TP53-222	ENST00000617185	KIF12	Q96FN5	646 aa		11.43	□□□□□ -0.58
TP53-222	ENST00000617185	ZNF578	Q96N58	590 aa	Predicted RBP	11.43	□□□□□ -0.58
TP53-222	ENST00000617185	SLC30A3	Q99726	388 aa		11.43	□□□□□ -0.58
TP53-222	ENST00000617185	RAPGEFL1	Q9UHV5	662 aa		11.43	□□□□□ -0.58
TP53-222	ENST00000617185	TNFSF13B	Q9Y275	285 aa		11.43	□□□□□ -0.58
TP53-222	ENST00000617185	BCLAF3	A2AJT9	711 aa	Known RBP	11.43	□□□□□ -0.58
TP53-222	ENST00000617185	CLDN24	A6NM45	220 aa		11.43	□□□□□ -0.58
TP53-222	ENST00000617185		H0YC42	278 aa		11.43	□□□□□ -0.58
TP53-222	ENST00000617185		I3L521	148 aa		11.43	□□□□□ -0.58
TP53-222	ENST00000617185	ARPP19	P56211	112 aa		11.43	□□□□□ -0.58
TP53-222	ENST00000617185	IRF9	Q00978	393 aa		11.43	□□□□□ -0.58
TP53-222	ENST00000617185	SEMA3B	Q13214	749 aa		11.43	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms