RNA–Protein interactions for RNA: ENST00000616053.4

TCF4-248, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 8,140 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-248ENST00000616053 GJD3Q8N144 294 aa12.53□□□□□ -0.4
TCF4-248ENST00000616053 TRAPPC12Q8WVT3 735 aa12.53□□□□□ -0.4
TCF4-248ENST00000616053 C11orf49Q9H6J7 331 aa12.53□□□□□ -0.4
TCF4-248ENST00000616053 ELAC1Q9H777 363 aaKnown RBP12.53□□□□□ -0.4
TCF4-248ENST00000616053 SLC22A14Q9Y267 594 aa12.53□□□□□ -0.4
TCF4-248ENST00000616053 TCOF1Q13428 1488 aaKnown RBP12.53□□□□□ -0.4
TCF4-248ENST00000616053 TPPPO94811 219 aa12.53□□□□□ -0.4
TCF4-248ENST00000616053 DHFRP00374 187 aa12.53□□□□□ -0.4
TCF4-248ENST00000616053 CCR3P51677 355 aa12.53□□□□□ -0.4
TCF4-248ENST00000616053 ZBTB8BQ8NAP8 495 aaPredicted RBP12.53□□□□□ -0.4
TCF4-248ENST00000616053 SIDT2Q8NBJ9 832 aaKnown RBP12.53□□□□□ -0.4
TCF4-248ENST00000616053 ATOH1Q92858 354 aaPredicted RBP12.53□□□□□ -0.4
TCF4-248ENST00000616053 LRFN1Q9P244 771 aa12.53□□□□□ -0.4
TCF4-248ENST00000616053 HMGXB4Q9UGU5 601 aa12.53□□□□□ -0.4
TCF4-248ENST00000616053 LACTBL1A8MY62 500 aa12.52□□□□□ -0.4
TCF4-248ENST00000616053 NPIPA2E9PIF3 369 aa12.52□□□□□ -0.4
TCF4-248ENST00000616053 NPIPA3F8WFD2 350 aa12.52□□□□□ -0.4
TCF4-248ENST00000616053 PPIBP23284 216 aaKnown RBP12.52□□□□□ -0.4
TCF4-248ENST00000616053 RGS19P49795 217 aa12.52□□□□□ -0.4
TCF4-248ENST00000616053 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.52□□□□□ -0.4
TCF4-248ENST00000616053 KATNAL2Q8IYT4 538 aa12.52□□□□□ -0.4
TCF4-248ENST00000616053 NSUN4Q96CB9 384 aaKnown RBP12.52□□□□□ -0.4
TCF4-248ENST00000616053 TRIM9Q9C026 710 aa12.52□□□□□ -0.4
TCF4-248ENST00000616053 TAGLN3Q9UI15 199 aa12.52□□□□□ -0.4
TCF4-248ENST00000616053 MAU2Q9Y6X3 613 aa12.52□□□□□ -0.4
TCF4-248ENST00000616053 ACRP10323 421 aa12.52□□□□□ -0.4
TCF4-248ENST00000616053 TNFSF4P23510 183 aa12.52□□□□□ -0.4
TCF4-248ENST00000616053 ANTXR2P58335 489 aa12.52□□□□□ -0.4
TCF4-248ENST00000616053 SLC22A17Q8WUG5 538 aa12.52□□□□□ -0.4
TCF4-248ENST00000616053 CPT1BQ92523 772 aa12.52□□□□□ -0.4
TCF4-248ENST00000616053 LRRC1Q9BTT6 524 aa12.52□□□□□ -0.4
TCF4-248ENST00000616053 GDF3Q9NR23 364 aa12.52□□□□□ -0.4
TCF4-248ENST00000616053 BLOC1S4Q9NUP1 217 aa12.52□□□□□ -0.4
TCF4-248ENST00000616053 RNF19AQ9NV58 838 aa12.52□□□□□ -0.4
TCF4-248ENST00000616053 C14orf166Q9Y224 244 aaKnown RBP12.52□□□□□ -0.4
TCF4-248ENST00000616053 CA12O43570 354 aa12.52□□□□□ -0.41
TCF4-248ENST00000616053 ITIH1P19827 911 aa12.52□□□□□ -0.41
TCF4-248ENST00000616053 LAPTM5Q13571 262 aa12.52□□□□□ -0.41
TCF4-248ENST00000616053 ITGA7Q13683 1181 aa12.52□□□□□ -0.41
TCF4-248ENST00000616053 PRR11Q96HE9 360 aaPredicted RBP12.52□□□□□ -0.41
TCF4-248ENST00000616053 CARS2Q9HA77 564 aaKnown RBP12.52□□□□□ -0.41
TCF4-248ENST00000616053 PHTF1Q9UMS5 762 aa12.52□□□□□ -0.41
TCF4-248ENST00000616053 ILVBLA1L0T0 632 aa12.52□□□□□ -0.41
TCF4-248ENST00000616053 FBP2O00757 339 aa12.52□□□□□ -0.41
TCF4-248ENST00000616053 SGPL1O95470 568 aa12.52□□□□□ -0.41
TCF4-248ENST00000616053 ZSCAN5DPP0CG00 497 aa12.52□□□□□ -0.41
TCF4-248ENST00000616053 SMIM10L2AP0DMW4 78 aa12.52□□□□□ -0.41
TCF4-248ENST00000616053 SMIM10L2BP0DMW5 78 aa12.52□□□□□ -0.41
TCF4-248ENST00000616053 RARAP10276 462 aa12.52□□□□□ -0.41
TCF4-248ENST00000616053 ACVR2AP27037 513 aa12.52□□□□□ -0.41
TCF4-248ENST00000616053 RCAN2Q14206 197 aa12.52□□□□□ -0.41
TCF4-248ENST00000616053 SLC30A10Q6XR72 485 aa12.52□□□□□ -0.41
TCF4-248ENST00000616053 ELMO3Q96BJ8 720 aa12.52□□□□□ -0.41
TCF4-248ENST00000616053 SCGB3A2Q96PL1 93 aa12.52□□□□□ -0.41
TCF4-248ENST00000616053 VAT1Q99536 393 aa12.52□□□□□ -0.41
TCF4-248ENST00000616053 P2RX7Q99572 595 aaKnown RBP12.52□□□□□ -0.41
TCF4-248ENST00000616053 ZSCAN5AQ9BUG6 496 aa12.52□□□□□ -0.41
TCF4-248ENST00000616053 AGPAT3Q9NRZ7 376 aa12.52□□□□□ -0.41
TCF4-248ENST00000616053 HTR3EA5X5Y0 456 aa12.52□□□□□ -0.41
TCF4-248ENST00000616053 TUBG1P23258 451 aa12.52□□□□□ -0.41
TCF4-248ENST00000616053 GHRHRQ02643 423 aa12.52□□□□□ -0.41
TCF4-248ENST00000616053 SLC10A7Q0GE19 358 aa12.52□□□□□ -0.41
TCF4-248ENST00000616053 PDSS2Q86YH6 399 aa12.52□□□□□ -0.41
TCF4-248ENST00000616053 PIGXQ8TBF5 258 aa12.52□□□□□ -0.41
TCF4-248ENST00000616053 DYNLRB1Q9NP97 96 aa12.52□□□□□ -0.41
TCF4-248ENST00000616053 TMEM9Q9P0T7 183 aa12.52□□□□□ -0.41
TCF4-248ENST00000616053 PEX11AO75192 247 aa12.52□□□□□ -0.41
TCF4-248ENST00000616053 PIRTP0C851 137 aa12.52□□□□□ -0.41
TCF4-248ENST00000616053 ABOP16442 354 aa12.52□□□□□ -0.41
TCF4-248ENST00000616053 MDH1P40925 334 aaKnown RBP12.52□□□□□ -0.41
TCF4-248ENST00000616053 ENPP2Q13822 863 aa12.52□□□□□ -0.41
TCF4-248ENST00000616053 PRAMEF17Q5VTA0 474 aa12.52□□□□□ -0.41
TCF4-248ENST00000616053 FAM35AQ86V20 835 aa12.52□□□□□ -0.41
TCF4-248ENST00000616053 EHD1Q9H4M9 534 aa12.52□□□□□ -0.41
TCF4-248ENST00000616053 ANKRD28O15084 1053 aa12.51□□□□□ -0.41
TCF4-248ENST00000616053 IFNGR1P15260 489 aa12.51□□□□□ -0.41
TCF4-248ENST00000616053 MSR1P21757 451 aa12.51□□□□□ -0.41
TCF4-248ENST00000616053 CCND1P24385 295 aa12.51□□□□□ -0.41
TCF4-248ENST00000616053 MC4RP32245 332 aa12.51□□□□□ -0.41
TCF4-248ENST00000616053 NAGLUP54802 743 aa12.51□□□□□ -0.41
TCF4-248ENST00000616053 RPL11P62913 178 aaKnown RBP12.51□□□□□ -0.41
TCF4-248ENST00000616053 RASA2Q15283 850 aa12.51□□□□□ -0.41
TCF4-248ENST00000616053 NEPROQ6NW34 567 aa12.51□□□□□ -0.41
TCF4-248ENST00000616053 CRYBG2Q8N1P7 616 aa12.51□□□□□ -0.41
TCF4-248ENST00000616053 OR52E6Q96RD3 313 aa12.51□□□□□ -0.41
TCF4-248ENST00000616053 PAFAH2Q99487 392 aa12.51□□□□□ -0.41
TCF4-248ENST00000616053 ABCB10Q9NRK6 738 aa12.51□□□□□ -0.41
TCF4-248ENST00000616053 FKBP7Q9Y680 259 aa12.51□□□□□ -0.41
TCF4-248ENST00000616053 MAGEA13PA6NCF6 341 aa12.51□□□□□ -0.41
TCF4-248ENST00000616053 CLEC3BP05452 202 aa12.51□□□□□ -0.41
TCF4-248ENST00000616053 DGKGP49619 791 aa12.51□□□□□ -0.41
TCF4-248ENST00000616053 GSTM4Q03013 218 aa12.51□□□□□ -0.41
TCF4-248ENST00000616053 USF2Q15853 346 aaPredicted RBP12.51□□□□□ -0.41
TCF4-248ENST00000616053 SLC41A1Q8IVJ1 513 aa12.51□□□□□ -0.41
TCF4-248ENST00000616053 PSKH2Q96QS6 385 aa12.51□□□□□ -0.41
TCF4-248ENST00000616053 MKKSQ9NPJ1 570 aaPredicted RBP12.51□□□□□ -0.41
TCF4-248ENST00000616053 CLRN1P58418 232 aa12.51□□□□□ -0.41
TCF4-248ENST00000616053 C1QTNF8P60827 252 aa12.51□□□□□ -0.41
TCF4-248ENST00000616053 GPRIN3Q6ZVF9 776 aa12.51□□□□□ -0.41
TCF4-248ENST00000616053 RCBTB1Q8NDN9 531 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms