RNA–Protein interactions for RNA: ENST00000613795.4

CLCN3-211, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,874 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-211ENST00000613795 R3HCC1LQ7Z5L2 792 aaKnown RBP6.81□□□□□ -1.32
CLCN3-211ENST00000613795 PLCZ1Q86YW0 608 aa6.81□□□□□ -1.32
CLCN3-211ENST00000613795 CXorf40AQ8TE69 158 aa6.81□□□□□ -1.32
CLCN3-211ENST00000613795 RHBDF1Q96CC6 855 aa6.81□□□□□ -1.32
CLCN3-211ENST00000613795 PFDN5Q99471 154 aa6.81□□□□□ -1.32
CLCN3-211ENST00000613795 P2RX7Q99572 595 aaKnown RBP6.81□□□□□ -1.32
CLCN3-211ENST00000613795 ACO2Q99798 780 aaKnown RBP6.81□□□□□ -1.32
CLCN3-211ENST00000613795 KCTD5Q9NXV2 234 aa6.81□□□□□ -1.32
CLCN3-211ENST00000613795 SMIM35A0A1B0GVV1 85 aa6.81□□□□□ -1.32
CLCN3-211ENST00000613795 SH3D21A4FU49 640 aa6.81□□□□□ -1.32
CLCN3-211ENST00000613795 ADAMDEC1O15204 470 aa6.81□□□□□ -1.32
CLCN3-211ENST00000613795 GRIA2P42262 883 aa6.81□□□□□ -1.32
CLCN3-211ENST00000613795 CRATP43155 626 aa6.81□□□□□ -1.32
CLCN3-211ENST00000613795 ACSM2AQ08AH3 577 aa6.81□□□□□ -1.32
CLCN3-211ENST00000613795 ZC3H12AQ5D1E8 599 aaKnown RBP6.81□□□□□ -1.32
CLCN3-211ENST00000613795 INTS6LQ5JSJ4 861 aaKnown RBP6.81□□□□□ -1.32
CLCN3-211ENST00000613795 ACSM2BQ68CK6 577 aa6.81□□□□□ -1.32
CLCN3-211ENST00000613795 STRADAQ7RTN6 431 aa6.81□□□□□ -1.32
CLCN3-211ENST00000613795 CHERPQ8IWX8 916 aaKnown RBP6.81□□□□□ -1.32
CLCN3-211ENST00000613795 GOLM1Q8NBJ4 401 aa6.81□□□□□ -1.32
CLCN3-211ENST00000613795 OR52K1Q8NGK4 314 aa6.81□□□□□ -1.32
CLCN3-211ENST00000613795 DNAJA4Q8WW22 397 aaPredicted RBP6.81□□□□□ -1.32
CLCN3-211ENST00000613795 GATA6Q92908 595 aa6.81□□□□□ -1.32
CLCN3-211ENST00000613795 PRICKLE1Q96MT3 831 aaPredicted RBP6.81□□□□□ -1.32
CLCN3-211ENST00000613795 GAD1Q99259 594 aa6.81□□□□□ -1.32
CLCN3-211ENST00000613795 CCDC32Q9BV29 185 aa6.81□□□□□ -1.32
CLCN3-211ENST00000613795 PAQR5Q9NXK6 330 aaPredicted RBP6.81□□□□□ -1.32
CLCN3-211ENST00000613795 SALL4Q9UJQ4 1053 aa6.81□□□□□ -1.32
CLCN3-211ENST00000613795 LYVE1Q9Y5Y7 322 aa6.81□□□□□ -1.32
CLCN3-211ENST00000613795 RIC1Q4ADV7 1423 aa6.81□□□□□ -1.32
CLCN3-211ENST00000613795 UNCXA6NJT0 531 aa6.81□□□□□ -1.32
CLCN3-211ENST00000613795 H3BM21 787 aa6.81□□□□□ -1.32
CLCN3-211ENST00000613795 HTRA2O43464 458 aaPredicted RBP6.81□□□□□ -1.32
CLCN3-211ENST00000613795 TMEM127O75204 238 aa6.81□□□□□ -1.32
CLCN3-211ENST00000613795 SNX4O95219 450 aa6.81□□□□□ -1.32
CLCN3-211ENST00000613795 PRKAR2AP13861 404 aaKnown RBP6.81□□□□□ -1.32
CLCN3-211ENST00000613795 CREB1P16220 341 aa6.81□□□□□ -1.32
CLCN3-211ENST00000613795 EPB42P16452 691 aa6.81□□□□□ -1.32
CLCN3-211ENST00000613795 PSMB4P28070 264 aa6.81□□□□□ -1.32
CLCN3-211ENST00000613795 LCN1P31025 176 aa6.81□□□□□ -1.32
CLCN3-211ENST00000613795 STT3AP46977 705 aa6.81□□□□□ -1.32
CLCN3-211ENST00000613795 BTN3A2P78410 334 aa6.81□□□□□ -1.32
CLCN3-211ENST00000613795 CYP4F8P98187 520 aa6.81□□□□□ -1.32
CLCN3-211ENST00000613795 MAP2K5Q13163 448 aa6.81□□□□□ -1.32
CLCN3-211ENST00000613795 GALNT3Q14435 633 aa6.81□□□□□ -1.32
CLCN3-211ENST00000613795 SETMARQ53H47 684 aaPredicted RBP6.81□□□□□ -1.32
CLCN3-211ENST00000613795 OR52E8Q6IFG1 317 aa6.81□□□□□ -1.32
CLCN3-211ENST00000613795 SPERTQ8NA61 448 aa6.81□□□□□ -1.32
CLCN3-211ENST00000613795 C15orf40Q8WUR7 153 aa6.81□□□□□ -1.32
CLCN3-211ENST00000613795 ACOT12Q8WYK0 555 aa6.81□□□□□ -1.32
CLCN3-211ENST00000613795 CPT1BQ92523 772 aa6.81□□□□□ -1.32
CLCN3-211ENST00000613795 TCEAL4Q96EI5 215 aa6.81□□□□□ -1.32
CLCN3-211ENST00000613795 MED30Q96HR3 178 aa6.81□□□□□ -1.32
CLCN3-211ENST00000613795 SENP8Q96LD8 212 aa6.81□□□□□ -1.32
CLCN3-211ENST00000613795 CPXM1Q96SM3 734 aa6.81□□□□□ -1.32
CLCN3-211ENST00000613795 ATP13A3Q9H7F0 1226 aa6.81□□□□□ -1.32
CLCN3-211ENST00000613795 VRTNQ9H8Y1 702 aa6.81□□□□□ -1.32
CLCN3-211ENST00000613795 PTPRHQ9HD43 1115 aa6.81□□□□□ -1.32
CLCN3-211ENST00000613795 NDUFAF4Q9P032 175 aa6.81□□□□□ -1.32
CLCN3-211ENST00000613795 MSRAQ9UJ68 235 aa6.81□□□□□ -1.32
CLCN3-211ENST00000613795 ASTN1O14525 1302 aa6.81□□□□□ -1.32
CLCN3-211ENST00000613795 OR10H3O60404 316 aa6.81□□□□□ -1.32
CLCN3-211ENST00000613795 IPO13O94829 963 aaKnown RBP6.81□□□□□ -1.32
CLCN3-211ENST00000613795 HNRNPLP14866 589 aaKnown RBP eCLIP6.81□□□□□ -1.32
CLCN3-211ENST00000613795 ZNF182P17025 639 aaPredicted RBP6.81□□□□□ -1.32
CLCN3-211ENST00000613795 ACSL1P33121 698 aa6.81□□□□□ -1.32
CLCN3-211ENST00000613795 PRMT2P55345 433 aa6.81□□□□□ -1.32
CLCN3-211ENST00000613795 ACOX1Q15067 660 aa6.81□□□□□ -1.32
CLCN3-211ENST00000613795 TMEM44Q2T9K0 475 aa6.81□□□□□ -1.32
CLCN3-211ENST00000613795 TRIM40Q6P9F5 258 aa6.81□□□□□ -1.32
CLCN3-211ENST00000613795 LHFPL3Q86UP9 236 aa6.81□□□□□ -1.32
CLCN3-211ENST00000613795 UFD1Q92890 307 aa6.81□□□□□ -1.32
CLCN3-211ENST00000613795 MFSD14AQ96MC6 490 aa6.81□□□□□ -1.32
CLCN3-211ENST00000613795 OR52E6Q96RD3 313 aa6.81□□□□□ -1.32
CLCN3-211ENST00000613795 TKTL2Q9H0I9 626 aa6.81□□□□□ -1.32
CLCN3-211ENST00000613795 ATXN3LQ9H3M9 355 aa6.81□□□□□ -1.32
CLCN3-211ENST00000613795 FAM25EA8MYX2 175 aa6.8□□□□□ -1.32
CLCN3-211ENST00000613795 CHURC1-FNTBB4DL54 471 aa6.8□□□□□ -1.32
CLCN3-211ENST00000613795 CSDE1O75534 798 aaKnown RBP6.8□□□□□ -1.32
CLCN3-211ENST00000613795 INMTO95050 263 aa6.8□□□□□ -1.32
CLCN3-211ENST00000613795 C2P06681 752 aa6.8□□□□□ -1.32
CLCN3-211ENST00000613795 IMPDH1P20839 514 aa6.8□□□□□ -1.32
CLCN3-211ENST00000613795 UBA1P22314 1058 aaKnown RBP6.8□□□□□ -1.32
CLCN3-211ENST00000613795 LIMK2P53671 638 aa6.8□□□□□ -1.32
CLCN3-211ENST00000613795 RPA4Q13156 261 aa6.8□□□□□ -1.32
CLCN3-211ENST00000613795 NOMO1Q15155 1222 aa6.8□□□□□ -1.32
CLCN3-211ENST00000613795 PON2Q15165 354 aa6.8□□□□□ -1.32
CLCN3-211ENST00000613795 C21orf62-AS1Q17RA5 79 aa6.8□□□□□ -1.32
CLCN3-211ENST00000613795 FNDC3BQ53EP0 1204 aaKnown RBP6.8□□□□□ -1.32
CLCN3-211ENST00000613795 OGFRL1Q5TC84 451 aaPredicted RBP6.8□□□□□ -1.32
CLCN3-211ENST00000613795 SMIM5Q71RC9 77 aa6.8□□□□□ -1.32
CLCN3-211ENST00000613795 ZC3H7AQ8IWR0 971 aaKnown RBP6.8□□□□□ -1.32
CLCN3-211ENST00000613795 PPTC7Q8NI37 304 aa6.8□□□□□ -1.32
CLCN3-211ENST00000613795 SLC2A14Q8TDB8 520 aa6.8□□□□□ -1.32
CLCN3-211ENST00000613795 DNAJC19Q96DA6 116 aa6.8□□□□□ -1.32
CLCN3-211ENST00000613795 TCEAL7Q9BRU2 100 aa6.8□□□□□ -1.32
CLCN3-211ENST00000613795 HERC2P3Q9BVR0 1158 aa6.8□□□□□ -1.32
CLCN3-211ENST00000613795 MKRN2Q9H000 416 aaKnown RBP6.8□□□□□ -1.32
CLCN3-211ENST00000613795 SAV1Q9H4B6 383 aaPredicted RBP6.8□□□□□ -1.32
CLCN3-211ENST00000613795 NECTIN3Q9NQS3 549 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms