RNA–Protein interactions for RNA: ENST00000612946.4

TTC28-208, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TTC28, Length 11,274 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-208ENST00000612946 NXPE2Q96DL1 559 aa8.69□□□□□ -1.02
TTC28-208ENST00000612946 PANX1Q96RD7 426 aa8.69□□□□□ -1.02
TTC28-208ENST00000612946 COMMD4Q9H0A8 199 aa8.69□□□□□ -1.02
TTC28-208ENST00000612946 EXO5Q9H790 373 aa8.69□□□□□ -1.02
TTC28-208ENST00000612946 ST14Q9Y5Y6 855 aa8.69□□□□□ -1.02
TTC28-208ENST00000612946 FAM234BA2RU67 622 aa8.69□□□□□ -1.02
TTC28-208ENST00000612946 H3BNH8 94 aa8.69□□□□□ -1.02
TTC28-208ENST00000612946 IGKV5-2P06315 115 aa8.69□□□□□ -1.02
TTC28-208ENST00000612946 PTPN3P26045 913 aa8.69□□□□□ -1.02
TTC28-208ENST00000612946 KIR3DL1P43629 444 aa8.69□□□□□ -1.02
TTC28-208ENST00000612946 ST8SIA6P61647 398 aa8.69□□□□□ -1.02
TTC28-208ENST00000612946 MIIPQ5JXC2 388 aa8.69□□□□□ -1.02
TTC28-208ENST00000612946 LURAP1Q96LR2 239 aa8.69□□□□□ -1.02
TTC28-208ENST00000612946 MAPKAP1Q9BPZ7 522 aa8.69□□□□□ -1.02
TTC28-208ENST00000612946 SHROOM3Q8TF72 1996 aa8.69□□□□□ -1.02
TTC28-208ENST00000612946 OAZ2O95190 189 aa8.69□□□□□ -1.02
TTC28-208ENST00000612946 PAK4O96013 591 aaPredicted RBP8.69□□□□□ -1.02
TTC28-208ENST00000612946 IL1BP01584 269 aa8.69□□□□□ -1.02
TTC28-208ENST00000612946 IL3P08700 152 aa8.69□□□□□ -1.02
TTC28-208ENST00000612946 LHX1P48742 406 aa8.69□□□□□ -1.02
TTC28-208ENST00000612946 ACOT2P49753 483 aa8.69□□□□□ -1.02
TTC28-208ENST00000612946 SLC26A2P50443 739 aa8.69□□□□□ -1.02
TTC28-208ENST00000612946 GALEQ14376 348 aa8.69□□□□□ -1.02
TTC28-208ENST00000612946 LRRN1Q6UXK5 716 aa8.69□□□□□ -1.02
TTC28-208ENST00000612946 SULF1Q8IWU6 871 aa8.69□□□□□ -1.02
TTC28-208ENST00000612946 LENG9Q96B70 501 aa8.69□□□□□ -1.02
TTC28-208ENST00000612946 FKBP7Q9Y680 259 aa8.69□□□□□ -1.02
TTC28-208ENST00000612946 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.69□□□□□ -1.02
TTC28-208ENST00000612946 HMGN1P05114 100 aa8.69□□□□□ -1.02
TTC28-208ENST00000612946 SERPIND1P05546 499 aa8.69□□□□□ -1.02
TTC28-208ENST00000612946 ZNF177Q13360 481 aaPredicted RBP8.69□□□□□ -1.02
TTC28-208ENST00000612946 RAB11FIP2Q7L804 512 aa8.69□□□□□ -1.02
TTC28-208ENST00000612946 CHPT1Q8WUD6 406 aa8.69□□□□□ -1.02
TTC28-208ENST00000612946 APBA2Q99767 749 aa8.69□□□□□ -1.02
TTC28-208ENST00000612946 TBCDQ9BTW9 1192 aa8.69□□□□□ -1.02
TTC28-208ENST00000612946 BCL2L14Q9BZR8 327 aa8.69□□□□□ -1.02
TTC28-208ENST00000612946 TPK1Q9H3S4 243 aa8.69□□□□□ -1.02
TTC28-208ENST00000612946 FAM83DQ9H4H8 585 aa8.69□□□□□ -1.02
TTC28-208ENST00000612946 HCN2Q9UL51 889 aa8.69□□□□□ -1.02
TTC28-208ENST00000612946 NME7Q9Y5B8 376 aa8.69□□□□□ -1.02
TTC28-208ENST00000612946 EME2A4GXA9 379 aaPredicted RBP8.69□□□□□ -1.02
TTC28-208ENST00000612946 ARL6IP5O75915 188 aa8.69□□□□□ -1.02
TTC28-208ENST00000612946 IFNA1P01562 189 aa8.69□□□□□ -1.02
TTC28-208ENST00000612946 RHDQ02161 417 aa8.69□□□□□ -1.02
TTC28-208ENST00000612946 TIGD2Q4W5G0 525 aa8.69□□□□□ -1.02
TTC28-208ENST00000612946 ARSKQ6UWY0 536 aa8.69□□□□□ -1.02
TTC28-208ENST00000612946 NIPA1Q7RTP0 329 aa8.69□□□□□ -1.02
TTC28-208ENST00000612946 ZSCAN1Q8NBB4 408 aa8.69□□□□□ -1.02
TTC28-208ENST00000612946 TMEM159Q96B96 161 aa8.69□□□□□ -1.02
TTC28-208ENST00000612946 FANCFQ9NPI8 374 aa8.69□□□□□ -1.02
TTC28-208ENST00000612946 SEMA3GQ9NS98 782 aa8.69□□□□□ -1.02
TTC28-208ENST00000612946 TMEM45AQ9NWC5 275 aa8.69□□□□□ -1.02
TTC28-208ENST00000612946 ACTR10Q9NZ32 417 aa8.69□□□□□ -1.02
TTC28-208ENST00000612946 SIX4Q9UIU6 781 aa8.69□□□□□ -1.02
TTC28-208ENST00000612946 SPATA31D1Q6ZQQ2 1576 aa8.69□□□□□ -1.02
TTC28-208ENST00000612946 GH1P01241 217 aa8.69□□□□□ -1.02
TTC28-208ENST00000612946 IFNA21P01568 189 aa8.69□□□□□ -1.02
TTC28-208ENST00000612946 C4orf46Q504U0 113 aa8.69□□□□□ -1.02
TTC28-208ENST00000612946 SH3PXD2AQ5TCZ1 1133 aa8.69□□□□□ -1.02
TTC28-208ENST00000612946 ZNF425Q6IV72 752 aa8.69□□□□□ -1.02
TTC28-208ENST00000612946 COMMD2Q86X83 199 aa8.69□□□□□ -1.02
TTC28-208ENST00000612946 PTGR2Q8N8N7 351 aaPredicted RBP8.69□□□□□ -1.02
TTC28-208ENST00000612946 RIT1Q92963 219 aa8.69□□□□□ -1.02
TTC28-208ENST00000612946 FUZQ9BT04 418 aa8.69□□□□□ -1.02
TTC28-208ENST00000612946 FUNDC2Q9BWH2 189 aa8.69□□□□□ -1.02
TTC28-208ENST00000612946 LGR4Q9BXB1 951 aa8.69□□□□□ -1.02
TTC28-208ENST00000612946 TM9SF3Q9HD45 589 aa8.69□□□□□ -1.02
TTC28-208ENST00000612946 CHST7Q9NS84 486 aa8.69□□□□□ -1.02
TTC28-208ENST00000612946 PADI2Q9Y2J8 665 aa8.69□□□□□ -1.02
TTC28-208ENST00000612946 M0QYT0 321 aa8.68□□□□□ -1.02
TTC28-208ENST00000612946 DCLK1O15075 740 aa8.68□□□□□ -1.02
TTC28-208ENST00000612946 ERVK-10P10266 1014 aa8.68□□□□□ -1.02
TTC28-208ENST00000612946 M6PRP20645 277 aa8.68□□□□□ -1.02
TTC28-208ENST00000612946 RFWD3Q6PCD5 774 aa8.68□□□□□ -1.02
TTC28-208ENST00000612946 CIR1Q86X95 450 aaPredicted RBP8.68□□□□□ -1.02
TTC28-208ENST00000612946 POMGNT2Q8NAT1 580 aa8.68□□□□□ -1.02
TTC28-208ENST00000612946 NCSTNQ92542 709 aa8.68□□□□□ -1.02
TTC28-208ENST00000612946 NKX1-2Q9UD57 310 aaPredicted RBP8.68□□□□□ -1.02
TTC28-208ENST00000612946 SHPRHQ149N8 1683 aa8.68□□□□□ -1.02
TTC28-208ENST00000612946 NAP1L6A6NFF2 107 aa8.68□□□□□ -1.02
TTC28-208ENST00000612946 SCGNO76038 276 aa8.68□□□□□ -1.02
TTC28-208ENST00000612946 MOCS2O96007 188 aaPredicted RBP8.68□□□□□ -1.02
TTC28-208ENST00000612946 CCNYL3P0C7X3 344 aa8.68□□□□□ -1.02
TTC28-208ENST00000612946 RYKP34925 604 aa8.68□□□□□ -1.02
TTC28-208ENST00000612946 ABCG1P45844 678 aa8.68□□□□□ -1.02
TTC28-208ENST00000612946 SNTA1Q13424 505 aa8.68□□□□□ -1.02
TTC28-208ENST00000612946 DDX39BQ13838 428 aaKnown RBP8.68□□□□□ -1.02
TTC28-208ENST00000612946 NPTX1Q15818 432 aa8.68□□□□□ -1.02
TTC28-208ENST00000612946 SELENOMQ8WWX9 145 aa8.68□□□□□ -1.02
TTC28-208ENST00000612946 ATP13A3Q9H7F0 1226 aa8.68□□□□□ -1.02
TTC28-208ENST00000612946 TRPV2Q9Y5S1 764 aa8.68□□□□□ -1.02
TTC28-208ENST00000612946 CARNS1A5YM72 827 aa8.68□□□□□ -1.02
TTC28-208ENST00000612946 FAM205CA6NFA0 338 aa8.68□□□□□ -1.02
TTC28-208ENST00000612946 PAHP00439 452 aa8.68□□□□□ -1.02
TTC28-208ENST00000612946 SBK2P0C263 348 aa8.68□□□□□ -1.02
TTC28-208ENST00000612946 BMP6P22004 513 aa8.68□□□□□ -1.02
TTC28-208ENST00000612946 MBTD1Q05BQ5 628 aa8.68□□□□□ -1.02
TTC28-208ENST00000612946 ATP6AP1Q15904 470 aa8.68□□□□□ -1.02
TTC28-208ENST00000612946 NLGN1Q8N2Q7 840 aa8.68□□□□□ -1.02
TTC28-208ENST00000612946 C7orf50Q9BRJ6 194 aaKnown RBP8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms