RNA–Protein interactions for RNA: ENST00000612795.1

CSNK1E-215, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-215ENST00000612795 VWA5B1Q5TIE3 1220 aa16.83■□□□□ 0.28
CSNK1E-215ENST00000612795 FAM69BQ5VUD6 431 aa16.83■□□□□ 0.28
CSNK1E-215ENST00000612795 TXNRD3NBQ6F5E7 133 aa16.83■□□□□ 0.28
CSNK1E-215ENST00000612795 ZNF517Q6ZMY9 492 aaPredicted RBP16.83■□□□□ 0.28
CSNK1E-215ENST00000612795 IRF2BP2Q7Z5L9 587 aa16.83■□□□□ 0.28
CSNK1E-215ENST00000612795 ZNF547Q8IVP9 402 aa16.83■□□□□ 0.28
CSNK1E-215ENST00000612795 D2HGDHQ8N465 521 aa16.83■□□□□ 0.28
CSNK1E-215ENST00000612795 GLIS1Q8NBF1 620 aa16.83■□□□□ 0.28
CSNK1E-215ENST00000612795 OR8K5Q8NH50 307 aa16.83■□□□□ 0.28
CSNK1E-215ENST00000612795 CPT1BQ92523 772 aa16.83■□□□□ 0.28
CSNK1E-215ENST00000612795 MARVELD3Q96A59 401 aa16.83■□□□□ 0.28
CSNK1E-215ENST00000612795 CLIP3Q96DZ5 547 aa16.83■□□□□ 0.28
CSNK1E-215ENST00000612795 TRIM11Q96F44 468 aa16.83■□□□□ 0.28
CSNK1E-215ENST00000612795 SGSM3Q96HU1 749 aa16.83■□□□□ 0.28
CSNK1E-215ENST00000612795 ERGIC2Q96RQ1 377 aa16.83■□□□□ 0.28
CSNK1E-215ENST00000612795 SMAD5Q99717 465 aaKnown RBP16.83■□□□□ 0.28
CSNK1E-215ENST00000612795 NLNQ9BYT8 704 aa16.83■□□□□ 0.28
CSNK1E-215ENST00000612795 ILKAPQ9H0C8 392 aaPredicted RBP16.83■□□□□ 0.28
CSNK1E-215ENST00000612795 FANCLQ9NW38 375 aa16.83■□□□□ 0.28
CSNK1E-215ENST00000612795 SOHLH2Q9NX45 425 aa16.83■□□□□ 0.28
CSNK1E-215ENST00000612795 CCDC88CQ9P219 2028 aa16.83■□□□□ 0.28
CSNK1E-215ENST00000612795 SHOC2Q9UQ13 582 aa16.83■□□□□ 0.28
CSNK1E-215ENST00000612795 WDR37Q9Y2I8 494 aa16.83■□□□□ 0.28
CSNK1E-215ENST00000612795 ARHGAP10A1A4S6 786 aa16.82■□□□□ 0.28
CSNK1E-215ENST00000612795 F5H423 210 aaPredicted RBP16.82■□□□□ 0.28
CSNK1E-215ENST00000612795 MEN1O00255 615 aa16.82■□□□□ 0.28
CSNK1E-215ENST00000612795 HNRNPRO43390 633 aaKnown RBP16.82■□□□□ 0.28
CSNK1E-215ENST00000612795 MMRN1Q13201 1228 aa16.82■□□□□ 0.28
CSNK1E-215ENST00000612795 ATP1A4Q13733 1029 aa16.82■□□□□ 0.28
CSNK1E-215ENST00000612795 PLEKHN1Q494U1 663 aaPredicted RBP16.82■□□□□ 0.28
CSNK1E-215ENST00000612795 SLC38A9Q8NBW4 561 aa16.82■□□□□ 0.28
CSNK1E-215ENST00000612795 ZNF501Q96CX3 271 aaPredicted RBP16.82■□□□□ 0.28
CSNK1E-215ENST00000612795 EID2BQ96D98 161 aa16.82■□□□□ 0.28
CSNK1E-215ENST00000612795 LRFN5Q96NI6 719 aa16.82■□□□□ 0.28
CSNK1E-215ENST00000612795 FANCEQ9HB96 536 aa16.82■□□□□ 0.28
CSNK1E-215ENST00000612795 C5AR2Q9P296 337 aa16.82■□□□□ 0.28
CSNK1E-215ENST00000612795 NFKBIL1Q9UBC1 381 aaPredicted RBP16.82■□□□□ 0.28
CSNK1E-215ENST00000612795 B3GNT3Q9Y2A9 372 aa16.82■□□□□ 0.28
CSNK1E-215ENST00000612795 NUP210LQ5VU65 1888 aa16.82■□□□□ 0.28
CSNK1E-215ENST00000612795 PCSK5Q92824 1860 aa16.82■□□□□ 0.28
CSNK1E-215ENST00000612795 OR5K3A6NET4 321 aa16.81■□□□□ 0.28
CSNK1E-215ENST00000612795 ZBTB11O95625 1053 aaPredicted RBP16.81■□□□□ 0.28
CSNK1E-215ENST00000612795 PIRTP0C851 137 aa16.81■□□□□ 0.28
CSNK1E-215ENST00000612795 MYBL1P10243 752 aa16.81■□□□□ 0.28
CSNK1E-215ENST00000612795 CCNCP24863 283 aa16.81■□□□□ 0.28
CSNK1E-215ENST00000612795 PIGHQ14442 188 aaPredicted RBP16.81■□□□□ 0.28
CSNK1E-215ENST00000612795 ASIC2Q16515 512 aa16.81■□□□□ 0.28
CSNK1E-215ENST00000612795 KHDC1Q4VXA5 237 aaKnown RBP16.81■□□□□ 0.28
CSNK1E-215ENST00000612795 LYPLAL1Q5VWZ2 237 aa16.81■□□□□ 0.28
CSNK1E-215ENST00000612795 NCBP2-AS2Q69YL0 99 aa16.81■□□□□ 0.28
CSNK1E-215ENST00000612795 ARMC6Q6NXE6 501 aa16.81■□□□□ 0.28
CSNK1E-215ENST00000612795 OOSP2Q86WS3 158 aa16.81■□□□□ 0.28
CSNK1E-215ENST00000612795 RAB43Q86YS6 212 aa16.81■□□□□ 0.28
CSNK1E-215ENST00000612795 DSELQ8IZU8 1212 aa16.81■□□□□ 0.28
CSNK1E-215ENST00000612795 GDAP1Q8TB36 358 aa16.81■□□□□ 0.28
CSNK1E-215ENST00000612795 FATE1Q969F0 183 aa16.81■□□□□ 0.28
CSNK1E-215ENST00000612795 TTC25Q96NG3 672 aa16.81■□□□□ 0.28
CSNK1E-215ENST00000612795 GPR63Q9BZJ6 419 aa16.81■□□□□ 0.28
CSNK1E-215ENST00000612795 LATS2Q9NRM7 1088 aa16.81■□□□□ 0.28
CSNK1E-215ENST00000612795 LIMA1Q9UHB6 759 aaKnown RBP16.81■□□□□ 0.28
CSNK1E-215ENST00000612795 ZNF711Q9Y462 761 aa16.81■□□□□ 0.28
CSNK1E-215ENST00000612795 ALPPP05187 535 aa16.8■□□□□ 0.28
CSNK1E-215ENST00000612795 GZMAP12544 262 aa16.8■□□□□ 0.28
CSNK1E-215ENST00000612795 SSR1P43307 286 aaKnown RBP16.8■□□□□ 0.28
CSNK1E-215ENST00000612795 PER3P56645 1201 aa16.8■□□□□ 0.28
CSNK1E-215ENST00000612795 SLC25A11Q02978 314 aaKnown RBP16.8■□□□□ 0.28
CSNK1E-215ENST00000612795 PAFAH1B3Q15102 231 aaKnown RBP16.8■□□□□ 0.28
CSNK1E-215ENST00000612795 PLEKHS1Q5SXH7 462 aa16.8■□□□□ 0.28
CSNK1E-215ENST00000612795 LCN10Q6JVE6 187 aa16.8■□□□□ 0.28
CSNK1E-215ENST00000612795 ZBTB2Q8N680 514 aa16.8■□□□□ 0.28
CSNK1E-215ENST00000612795 LRRN4Q8WUT4 740 aa16.8■□□□□ 0.28
CSNK1E-215ENST00000612795 RANBP9Q96S59 729 aa16.8■□□□□ 0.28
CSNK1E-215ENST00000612795 HAUS4Q9H6D7 363 aa16.8■□□□□ 0.28
CSNK1E-215ENST00000612795 IMP3Q9NV31 184 aaKnown RBP16.8■□□□□ 0.28
CSNK1E-215ENST00000612795 HRASLS2Q9NWW9 162 aa16.8■□□□□ 0.28
CSNK1E-215ENST00000612795 MYO6Q9UM54 1294 aa16.8■□□□□ 0.28
CSNK1E-215ENST00000612795 PSMD13Q9UNM6 376 aa16.8■□□□□ 0.28
CSNK1E-215ENST00000612795 COPG1Q9Y678 874 aaKnown RBP16.8■□□□□ 0.28
CSNK1E-215ENST00000612795 PCM1Q15154 2024 aa16.8■□□□□ 0.28
CSNK1E-215ENST00000612795 SEC16AO15027 2179 aa16.79■□□□□ 0.28
CSNK1E-215ENST00000612795 ZGRF1Q86YA3 2104 aa16.79■□□□□ 0.28
CSNK1E-215ENST00000612795 FER1L5A0AVI2 2057 aa16.79■□□□□ 0.28
CSNK1E-215ENST00000612795 MMP2P08253 660 aa16.79■□□□□ 0.28
CSNK1E-215ENST00000612795 CD48P09326 243 aa16.79■□□□□ 0.28
CSNK1E-215ENST00000612795 GJC1P36383 396 aa16.79■□□□□ 0.28
CSNK1E-215ENST00000612795 TMEM115Q12893 351 aaPredicted RBP16.79■□□□□ 0.28
CSNK1E-215ENST00000612795 XRCC4Q13426 336 aa16.79■□□□□ 0.28
CSNK1E-215ENST00000612795 RPE65Q16518 533 aa16.79■□□□□ 0.28
CSNK1E-215ENST00000612795 PRAMEF17Q5VTA0 474 aa16.79■□□□□ 0.28
CSNK1E-215ENST00000612795 HGSNATQ68CP4 663 aa16.79■□□□□ 0.28
CSNK1E-215ENST00000612795 FAM198BQ6UWH4 519 aa16.79■□□□□ 0.28
CSNK1E-215ENST00000612795 C11orf96Q7Z7L8 435 aa16.79■□□□□ 0.28
CSNK1E-215ENST00000612795 AMZ2Q86W34 360 aa16.79■□□□□ 0.28
CSNK1E-215ENST00000612795 SYTL1Q8IYJ3 562 aa16.79■□□□□ 0.28
CSNK1E-215ENST00000612795 CCNYQ8ND76 341 aa16.79■□□□□ 0.28
CSNK1E-215ENST00000612795 TSGA13Q96PP4 275 aa16.79■□□□□ 0.28
CSNK1E-215ENST00000612795 TLR10Q9BXR5 811 aa16.79■□□□□ 0.28
CSNK1E-215ENST00000612795 SLC7A5P2Q9GIP4 190 aa16.79■□□□□ 0.28
CSNK1E-215ENST00000612795 TMEM63CQ9P1W3 806 aa16.79■□□□□ 0.28
CSNK1E-215ENST00000612795 PADI2Q9Y2J8 665 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms