RNA–Protein interactions for RNA: ENST00000608568.1

SSX9-202, Transcript of Protein SSX9, humanhuman

TSL 4 BASIC

Gene SSX9, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX9-202ENST00000608568 NUDT2P50583 147 aa5.03□□□□□ -1.6
SSX9-202ENST00000608568 NDST1P52848 882 aa5.03□□□□□ -1.6
SSX9-202ENST00000608568 RAD23AP54725 363 aa5.03□□□□□ -1.6
SSX9-202ENST00000608568 ABCE1P61221 599 aaKnown RBP5.03□□□□□ -1.6
SSX9-202ENST00000608568 MVKQ03426 396 aa5.03□□□□□ -1.6
SSX9-202ENST00000608568 RUNX1T1Q06455 604 aa5.03□□□□□ -1.6
SSX9-202ENST00000608568 PPP3CAQ08209 521 aa5.03□□□□□ -1.6
SSX9-202ENST00000608568 CD300CQ08708 224 aa5.03□□□□□ -1.6
SSX9-202ENST00000608568 BFSP1Q12934 665 aa5.03□□□□□ -1.6
SSX9-202ENST00000608568 SEMA3BQ13214 749 aa5.03□□□□□ -1.6
SSX9-202ENST00000608568 PDK2Q15119 407 aa5.03□□□□□ -1.6
SSX9-202ENST00000608568 ATP6AP1Q15904 470 aa5.03□□□□□ -1.6
SSX9-202ENST00000608568 BBS9Q3SYG4 887 aa5.03□□□□□ -1.6
SSX9-202ENST00000608568 MDH1BQ5I0G3 518 aa5.03□□□□□ -1.6
SSX9-202ENST00000608568 SAMD4BQ5PRF9 694 aaKnown RBP5.03□□□□□ -1.6
SSX9-202ENST00000608568 BRMS1LQ5PSV4 323 aa5.03□□□□□ -1.6
SSX9-202ENST00000608568 PIK3R6Q5UE93 754 aa5.03□□□□□ -1.6
SSX9-202ENST00000608568 LMBRD2Q68DH5 695 aaPredicted RBP5.03□□□□□ -1.6
SSX9-202ENST00000608568 PRMT9Q6P2P2 845 aa5.03□□□□□ -1.6
SSX9-202ENST00000608568 NOTUMQ6P988 496 aa5.03□□□□□ -1.6
SSX9-202ENST00000608568 SLC27A1Q6PCB7 646 aa5.03□□□□□ -1.6
SSX9-202ENST00000608568 CCDC149Q6ZUS6 474 aa5.03□□□□□ -1.6
SSX9-202ENST00000608568 CREB3L2Q70SY1 520 aa5.03□□□□□ -1.6
SSX9-202ENST00000608568 ASCL5Q7RTU5 278 aa5.03□□□□□ -1.6
SSX9-202ENST00000608568 VN1R5Q7Z5H4 357 aa5.03□□□□□ -1.6
SSX9-202ENST00000608568 POLNQ7Z5Q5 900 aa5.03□□□□□ -1.6
SSX9-202ENST00000608568 C14orf80Q86SX3 495 aa5.03□□□□□ -1.6
SSX9-202ENST00000608568 USP37Q86T82 979 aa5.03□□□□□ -1.6
SSX9-202ENST00000608568 RALGPS2Q86X27 583 aaPredicted RBP5.03□□□□□ -1.6
SSX9-202ENST00000608568 SAMD14Q8IZD0 417 aaPredicted RBP5.03□□□□□ -1.6
SSX9-202ENST00000608568 CCDC185Q8N715 623 aa5.03□□□□□ -1.6
SSX9-202ENST00000608568 KIAA1958Q8N8K9 716 aa5.03□□□□□ -1.6
SSX9-202ENST00000608568 KCT2Q8NC54 265 aa5.03□□□□□ -1.6
SSX9-202ENST00000608568 HIPK4Q8NE63 616 aa5.03□□□□□ -1.6
SSX9-202ENST00000608568 CMASQ8NFW8 434 aaPredicted RBP5.03□□□□□ -1.6
SSX9-202ENST00000608568 OR7A2PQ8NGA2 310 aa5.03□□□□□ -1.6
SSX9-202ENST00000608568 OR6F1Q8NGZ6 308 aa5.03□□□□□ -1.6
SSX9-202ENST00000608568 LMO3Q8TAP4 145 aa5.03□□□□□ -1.6
SSX9-202ENST00000608568 SLC35B2Q8TB61 432 aa5.03□□□□□ -1.6
SSX9-202ENST00000608568 RHBDD1Q8TEB9 315 aa5.03□□□□□ -1.6
SSX9-202ENST00000608568 KLHL6Q8WZ60 621 aa5.03□□□□□ -1.6
SSX9-202ENST00000608568 SHC3Q92529 594 aa5.03□□□□□ -1.6
SSX9-202ENST00000608568 PIK3R3Q92569 461 aa5.03□□□□□ -1.6
SSX9-202ENST00000608568 HDAC2Q92769 488 aaKnown RBP5.03□□□□□ -1.6
SSX9-202ENST00000608568 PMEPA1Q969W9 287 aa5.03□□□□□ -1.6
SSX9-202ENST00000608568 PPWD1Q96BP3 646 aaKnown RBP5.03□□□□□ -1.6
SSX9-202ENST00000608568 ZNF775Q96BV0 537 aaPredicted RBP5.03□□□□□ -1.6
SSX9-202ENST00000608568 PDXPQ96GD0 296 aa5.03□□□□□ -1.6
SSX9-202ENST00000608568 CENPNQ96H22 339 aaPredicted RBP5.03□□□□□ -1.6
SSX9-202ENST00000608568 TMEM80Q96HE8 168 aa5.03□□□□□ -1.6
SSX9-202ENST00000608568 SERAC1Q96JX3 654 aa5.03□□□□□ -1.6
SSX9-202ENST00000608568 SUSD3Q96L08 255 aa5.03□□□□□ -1.6
SSX9-202ENST00000608568 UBXN10Q96LJ8 280 aa5.03□□□□□ -1.6
SSX9-202ENST00000608568 MFSD14AQ96MC6 490 aa5.03□□□□□ -1.6
SSX9-202ENST00000608568 TMEM74Q96NL1 305 aa5.03□□□□□ -1.6
SSX9-202ENST00000608568 SECISBP2Q96T21 854 aaKnown RBP5.03□□□□□ -1.6
SSX9-202ENST00000608568 TM9SF2Q99805 663 aa5.03□□□□□ -1.6
SSX9-202ENST00000608568 C17orf62Q9BQA9 187 aa5.03□□□□□ -1.6
SSX9-202ENST00000608568 EBF4Q9BQW3 602 aa5.03□□□□□ -1.6
SSX9-202ENST00000608568 RPP25Q9BUL9 199 aaKnown RBP5.03□□□□□ -1.6
SSX9-202ENST00000608568 CCDC32Q9BV29 185 aa5.03□□□□□ -1.6
SSX9-202ENST00000608568 CALN1Q9BXU9 219 aa5.03□□□□□ -1.6
SSX9-202ENST00000608568 MTMR12Q9C0I1 747 aa5.03□□□□□ -1.6
SSX9-202ENST00000608568 DNAI2Q9GZS0 605 aa5.03□□□□□ -1.6
SSX9-202ENST00000608568 HAPLN2Q9GZV7 340 aa5.03□□□□□ -1.6
SSX9-202ENST00000608568 CDT1Q9H211 546 aa5.03□□□□□ -1.6
SSX9-202ENST00000608568 FZD8Q9H461 694 aa5.03□□□□□ -1.6
SSX9-202ENST00000608568 NOL6Q9H6R4 1146 aaKnown RBP5.03□□□□□ -1.6
SSX9-202ENST00000608568 SYNDIG1Q9H7V2 258 aa5.03□□□□□ -1.6
SSX9-202ENST00000608568 NIPAL2Q9H841 368 aa5.03□□□□□ -1.6
SSX9-202ENST00000608568 WDR41Q9HAD4 459 aa5.03□□□□□ -1.6
SSX9-202ENST00000608568 RPRD1BQ9NQG5 326 aaKnown RBP5.03□□□□□ -1.6
SSX9-202ENST00000608568 HPS4Q9NQG7 708 aa5.03□□□□□ -1.6
SSX9-202ENST00000608568 CCM2LQ9NUG4 571 aaPredicted RBP5.03□□□□□ -1.6
SSX9-202ENST00000608568 MTPAPQ9NVV4 582 aaKnown RBP eCLIP5.03□□□□□ -1.6
SSX9-202ENST00000608568 SMOXQ9NWM0 555 aa5.03□□□□□ -1.6
SSX9-202ENST00000608568 HCFC1R1Q9NWW0 138 aa5.03□□□□□ -1.6
SSX9-202ENST00000608568 SMPD3Q9NY59 655 aaPredicted RBP5.03□□□□□ -1.6
SSX9-202ENST00000608568 TAS2R14Q9NYV8 317 aa5.03□□□□□ -1.6
SSX9-202ENST00000608568 MBD2Q9UBB5 411 aa5.03□□□□□ -1.6
SSX9-202ENST00000608568 IP6K2Q9UHH9 426 aa5.03□□□□□ -1.6
SSX9-202ENST00000608568 GLS2Q9UI32 602 aa5.03□□□□□ -1.6
SSX9-202ENST00000608568 MOSPD1Q9UJG1 213 aa5.03□□□□□ -1.6
SSX9-202ENST00000608568 ANAPC7Q9UJX3 599 aa5.03□□□□□ -1.6
SSX9-202ENST00000608568 FBXW11Q9UKB1 542 aa5.03□□□□□ -1.6
SSX9-202ENST00000608568 AJAP1Q9UKB5 411 aaPredicted RBP5.03□□□□□ -1.6
SSX9-202ENST00000608568 MAFFQ9ULX9 164 aa5.03□□□□□ -1.6
SSX9-202ENST00000608568 NAALAD2Q9Y3Q0 740 aa5.03□□□□□ -1.6
SSX9-202ENST00000608568 AUP1Q9Y679 476 aa5.03□□□□□ -1.6
SSX9-202ENST00000608568 BPTFQ12830 3046 aa5.03□□□□□ -1.6
SSX9-202ENST00000608568 NBEAQ8NFP9 2946 aa5.03□□□□□ -1.6
SSX9-202ENST00000608568 CABIN1Q9Y6J0 2220 aa5.03□□□□□ -1.6
SSX9-202ENST00000608568 DSPP15924 2871 aaKnown RBP5.02□□□□□ -1.61
SSX9-202ENST00000608568 A0A1W2PQ67 120 aa5.02□□□□□ -1.61
SSX9-202ENST00000608568 A0A1W2PQ72 361 aa5.02□□□□□ -1.61
SSX9-202ENST00000608568 TCRBV9S1A1TA0A576 114 aa5.02□□□□□ -1.61
SSX9-202ENST00000608568 FAM221BA6H8Z2 402 aa5.02□□□□□ -1.61
SSX9-202ENST00000608568 LINC00862A6NCI5 91 aa5.02□□□□□ -1.61
SSX9-202ENST00000608568 HMX3A6NHT5 357 aa5.02□□□□□ -1.61
SSX9-202ENST00000608568 BBIP1A8MTZ0 92 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms