RNA–Protein interactions for RNA: ENST00000600935.1

NUP62-222, Transcript of nucleoporin 62, human

TSL 4

Gene NUP62, Length 587 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NUP62-222	ENST00000600935	EPHB1	P54762	984 aa		10.78	□□□□□ -0.68
NUP62-222	ENST00000600935	CDH6	P55285	790 aa		10.78	□□□□□ -0.68
NUP62-222	ENST00000600935	POLR2F	P61218	127 aa	Known RBP	10.78	□□□□□ -0.68
NUP62-222	ENST00000600935	DSC2	Q02487	901 aa		10.78	□□□□□ -0.68
NUP62-222	ENST00000600935	DCAF10	Q5QP82	559 aa		10.78	□□□□□ -0.68
NUP62-222	ENST00000600935	ZNF385C	Q66K41	422 aa	Predicted RBP	10.78	□□□□□ -0.68
NUP62-222	ENST00000600935	HGSNAT	Q68CP4	663 aa		10.78	□□□□□ -0.68
NUP62-222	ENST00000600935	DCUN1D2	Q6PH85	259 aa		10.78	□□□□□ -0.68
NUP62-222	ENST00000600935	FBXO38	Q6PIJ6	1188 aa		10.78	□□□□□ -0.68
NUP62-222	ENST00000600935	LRRTM4	Q86VH4	590 aa		10.78	□□□□□ -0.68
NUP62-222	ENST00000600935	SYTL1	Q8IYJ3	562 aa		10.78	□□□□□ -0.68
NUP62-222	ENST00000600935	MCOLN2	Q8IZK6	566 aa		10.78	□□□□□ -0.68
NUP62-222	ENST00000600935	ZNF295-AS1	Q8N0V1	137 aa		10.78	□□□□□ -0.68
NUP62-222	ENST00000600935	NDUFAF2	Q8N183	169 aa		10.78	□□□□□ -0.68
NUP62-222	ENST00000600935	ATPAF2	Q8N5M1	289 aa		10.78	□□□□□ -0.68
NUP62-222	ENST00000600935	GPR26	Q8NDV2	337 aa		10.78	□□□□□ -0.68
NUP62-222	ENST00000600935	OR8K5	Q8NH50	307 aa		10.78	□□□□□ -0.68
NUP62-222	ENST00000600935	ARRDC2	Q8TBH0	407 aa		10.78	□□□□□ -0.68
NUP62-222	ENST00000600935	GRHL3	Q8TE85	626 aa		10.78	□□□□□ -0.68
NUP62-222	ENST00000600935	ITLN2	Q8WWU7	325 aa	Predicted RBP	10.78	□□□□□ -0.68
NUP62-222	ENST00000600935	CXorf40B	Q96DE9	158 aa		10.78	□□□□□ -0.68
NUP62-222	ENST00000600935	CD180	Q99467	661 aa		10.78	□□□□□ -0.68
NUP62-222	ENST00000600935	RUBCNL	Q9H714	662 aa		10.78	□□□□□ -0.68
NUP62-222	ENST00000600935	NLRC4	Q9NPP4	1024 aa		10.78	□□□□□ -0.68
NUP62-222	ENST00000600935	TRIM10	Q9UDY6	481 aa		10.78	□□□□□ -0.68
NUP62-222	ENST00000600935	TMPRSS11E	Q9UL52	423 aa		10.78	□□□□□ -0.68
NUP62-222	ENST00000600935	DNPEP	Q9ULA0	475 aa		10.78	□□□□□ -0.68
NUP62-222	ENST00000600935	NOVA2	Q9UNW9	492 aa	Known RBP	10.78	□□□□□ -0.68
NUP62-222	ENST00000600935	BTRC	Q9Y297	605 aa		10.78	□□□□□ -0.68
NUP62-222	ENST00000600935	KLF2	Q9Y5W3	355 aa	Predicted RBP	10.78	□□□□□ -0.68
NUP62-222	ENST00000600935	ANKRD12	Q6UB98	2062 aa		10.78	□□□□□ -0.68
NUP62-222	ENST00000600935	RGSL1	A5PLK6	1076 aa		10.77	□□□□□ -0.69
NUP62-222	ENST00000600935	DDX3Y	O15523	660 aa	Known RBP	10.77	□□□□□ -0.69
NUP62-222	ENST00000600935	GADD45B	O75293	160 aa	Predicted RBP	10.77	□□□□□ -0.69
NUP62-222	ENST00000600935	SLC25A14	O95258	325 aa	Predicted RBP	10.77	□□□□□ -0.69
NUP62-222	ENST00000600935	ALPP	P05187	535 aa		10.77	□□□□□ -0.69
NUP62-222	ENST00000600935	PSMA2	P25787	234 aa		10.77	□□□□□ -0.69
NUP62-222	ENST00000600935	IL1R2	P27930	398 aa		10.77	□□□□□ -0.69
NUP62-222	ENST00000600935	OTX2	P32243	289 aa		10.77	□□□□□ -0.69
NUP62-222	ENST00000600935	SOX8	P57073	446 aa		10.77	□□□□□ -0.69
NUP62-222	ENST00000600935	KRTAP10-9	P60411	292 aa		10.77	□□□□□ -0.69
NUP62-222	ENST00000600935	NIPAL4	Q0D2K0	466 aa		10.77	□□□□□ -0.69
NUP62-222	ENST00000600935	MAMLD1	Q13495	774 aa		10.77	□□□□□ -0.69
NUP62-222	ENST00000600935	QPCT	Q16769	361 aa		10.77	□□□□□ -0.69
NUP62-222	ENST00000600935	PTCHD3	Q3KNS1	767 aa		10.77	□□□□□ -0.69
NUP62-222	ENST00000600935	ZNF569	Q5MCW4	686 aa		10.77	□□□□□ -0.69
NUP62-222	ENST00000600935	DNTTIP2	Q5QJE6	756 aa	Known RBP	10.77	□□□□□ -0.69
NUP62-222	ENST00000600935	POLN	Q7Z5Q5	900 aa		10.77	□□□□□ -0.69
NUP62-222	ENST00000600935	PSTK	Q8IV42	348 aa	Known RBP	10.77	□□□□□ -0.69
NUP62-222	ENST00000600935	TMEM151B	Q8IW70	566 aa		10.77	□□□□□ -0.69
NUP62-222	ENST00000600935	BBS5	Q8N3I7	341 aa		10.77	□□□□□ -0.69
NUP62-222	ENST00000600935	LPCAT1	Q8NF37	534 aa		10.77	□□□□□ -0.69
NUP62-222	ENST00000600935	CPT1B	Q92523	772 aa		10.77	□□□□□ -0.69
NUP62-222	ENST00000600935	GLYATL1	Q969I3	302 aa		10.77	□□□□□ -0.69
NUP62-222	ENST00000600935	SLX1A	Q9BQ83	275 aa		10.77	□□□□□ -0.69
NUP62-222	ENST00000600935	TLR10	Q9BXR5	811 aa		10.77	□□□□□ -0.69
NUP62-222	ENST00000600935	POLR1E	Q9GZS1	481 aa	Known RBP	10.77	□□□□□ -0.69
NUP62-222	ENST00000600935	TAS2R14	Q9NYV8	317 aa		10.77	□□□□□ -0.69
NUP62-222	ENST00000600935	PKD2L2	Q9NZM6	624 aa		10.77	□□□□□ -0.69
NUP62-222	ENST00000600935	PES1	O00541	588 aa	Known RBP	10.76	□□□□□ -0.69
NUP62-222	ENST00000600935	ATMIN	O43313	823 aa	Predicted RBP	10.76	□□□□□ -0.69
NUP62-222	ENST00000600935	PRPSAP2	O60256	369 aa		10.76	□□□□□ -0.69
NUP62-222	ENST00000600935	DIAPH2	O60879	1101 aa		10.76	□□□□□ -0.69
NUP62-222	ENST00000600935	ZBTB11	O95625	1053 aa	Predicted RBP	10.76	□□□□□ -0.69
NUP62-222	ENST00000600935	SNRPB2	P08579	225 aa	Known RBP	10.76	□□□□□ -0.69
NUP62-222	ENST00000600935	TCF4	P15884	667 aa		10.76	□□□□□ -0.69
NUP62-222	ENST00000600935	IDS	P22304	550 aa		10.76	□□□□□ -0.69
NUP62-222	ENST00000600935	ARL4D	P49703	201 aa		10.76	□□□□□ -0.69
NUP62-222	ENST00000600935	KPNA2	P52292	529 aa	Known RBP	10.76	□□□□□ -0.69
NUP62-222	ENST00000600935	ZNF135	P52742	658 aa	Predicted RBP	10.76	□□□□□ -0.69
NUP62-222	ENST00000600935	RPL26	P61254	145 aa	Known RBP	10.76	□□□□□ -0.69
NUP62-222	ENST00000600935	RPE65	Q16518	533 aa		10.76	□□□□□ -0.69
NUP62-222	ENST00000600935	DPYSL2	Q16555	572 aa		10.76	□□□□□ -0.69
NUP62-222	ENST00000600935	HIF1A	Q16665	826 aa		10.76	□□□□□ -0.69
NUP62-222	ENST00000600935	ANKRD20A8P	Q5CZ79	823 aa		10.76	□□□□□ -0.69
NUP62-222	ENST00000600935	ALS2CL	Q60I27	953 aa		10.76	□□□□□ -0.69
NUP62-222	ENST00000600935	PLEKHA7	Q6IQ23	1121 aa		10.76	□□□□□ -0.69
NUP62-222	ENST00000600935	DUS1L	Q6P1R4	473 aa	Known RBP	10.76	□□□□□ -0.69
NUP62-222	ENST00000600935	TMCO3	Q6UWJ1	677 aa		10.76	□□□□□ -0.69
NUP62-222	ENST00000600935	RAB43	Q86YS6	212 aa		10.76	□□□□□ -0.69
NUP62-222	ENST00000600935	TTC30B	Q8N4P2	665 aa		10.76	□□□□□ -0.69
NUP62-222	ENST00000600935	ZADH2	Q8N4Q0	377 aa		10.76	□□□□□ -0.69
NUP62-222	ENST00000600935	ZC3H8	Q8N5P1	291 aa	Known RBP eCLIP	10.76	□□□□□ -0.69
NUP62-222	ENST00000600935	OR1L3	Q8NH93	324 aa		10.76	□□□□□ -0.69
NUP62-222	ENST00000600935	FAR1	Q8WVX9	515 aa		10.76	□□□□□ -0.69
NUP62-222	ENST00000600935	MAML1	Q92585	1016 aa		10.76	□□□□□ -0.69
NUP62-222	ENST00000600935	RELT	Q969Z4	430 aa		10.76	□□□□□ -0.69
NUP62-222	ENST00000600935	CSPG4P5	Q96PW8	444 aa		10.76	□□□□□ -0.69
NUP62-222	ENST00000600935	WDR77	Q9BQA1	342 aa	Predicted RBP	10.76	□□□□□ -0.69
NUP62-222	ENST00000600935	NUP85	Q9BW27	656 aa		10.76	□□□□□ -0.69
NUP62-222	ENST00000600935	SPATA16	Q9BXB7	569 aa		10.76	□□□□□ -0.69
NUP62-222	ENST00000600935	ZWILCH	Q9H900	591 aa		10.76	□□□□□ -0.69
NUP62-222	ENST00000600935	PCDH9	Q9HC56	1237 aa		10.76	□□□□□ -0.69
NUP62-222	ENST00000600935	NFKBIL1	Q9UBC1	381 aa	Predicted RBP	10.76	□□□□□ -0.69
NUP62-222	ENST00000600935	RPL26L1	Q9UNX3	145 aa	Known RBP	10.76	□□□□□ -0.69
NUP62-222	ENST00000600935		A0A1B0GUH1	482 aa		10.75	□□□□□ -0.69
NUP62-222	ENST00000600935	UBA6	A0AVT1	1052 aa	Predicted RBP	10.75	□□□□□ -0.69
NUP62-222	ENST00000600935	TMEM191C	A6NGB0	347 aa		10.75	□□□□□ -0.69
NUP62-222	ENST00000600935	VEGFD	O43915	354 aa		10.75	□□□□□ -0.69
NUP62-222	ENST00000600935	CNOT3	O75175	753 aa	Known RBP	10.75	□□□□□ -0.69

Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms